GO Enrichment Analysis of Co-expressed Genes with
AT5G42020
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044794: positive regulation by host of viral process | 0.00E+00 |
| 2 | GO:0034976: response to endoplasmic reticulum stress | 3.94E-13 |
| 3 | GO:0006457: protein folding | 6.91E-12 |
| 4 | GO:0030968: endoplasmic reticulum unfolded protein response | 5.59E-09 |
| 5 | GO:0045454: cell redox homeostasis | 2.87E-06 |
| 6 | GO:0046686: response to cadmium ion | 8.64E-06 |
| 7 | GO:0006430: lysyl-tRNA aminoacylation | 1.21E-05 |
| 8 | GO:0009306: protein secretion | 2.74E-05 |
| 9 | GO:0009805: coumarin biosynthetic process | 3.21E-05 |
| 10 | GO:0019632: shikimate metabolic process | 3.21E-05 |
| 11 | GO:0072334: UDP-galactose transmembrane transport | 8.79E-05 |
| 12 | GO:0043248: proteasome assembly | 1.98E-04 |
| 13 | GO:0009735: response to cytokinin | 2.32E-04 |
| 14 | GO:0009423: chorismate biosynthetic process | 2.39E-04 |
| 15 | GO:0009553: embryo sac development | 3.14E-04 |
| 16 | GO:0015780: nucleotide-sugar transport | 4.21E-04 |
| 17 | GO:0009651: response to salt stress | 4.59E-04 |
| 18 | GO:0010205: photoinhibition | 4.69E-04 |
| 19 | GO:0043067: regulation of programmed cell death | 4.69E-04 |
| 20 | GO:0009073: aromatic amino acid family biosynthetic process | 5.71E-04 |
| 21 | GO:0010075: regulation of meristem growth | 6.76E-04 |
| 22 | GO:0006108: malate metabolic process | 6.76E-04 |
| 23 | GO:0009934: regulation of meristem structural organization | 7.31E-04 |
| 24 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.08E-03 |
| 25 | GO:0008152: metabolic process | 1.63E-03 |
| 26 | GO:0016032: viral process | 1.68E-03 |
| 27 | GO:0030163: protein catabolic process | 1.76E-03 |
| 28 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.30E-03 |
| 29 | GO:0009555: pollen development | 2.60E-03 |
| 30 | GO:0010043: response to zinc ion | 2.71E-03 |
| 31 | GO:0006099: tricarboxylic acid cycle | 2.97E-03 |
| 32 | GO:0000209: protein polyubiquitination | 3.52E-03 |
| 33 | GO:0009644: response to high light intensity | 3.61E-03 |
| 34 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.90E-03 |
| 35 | GO:0009809: lignin biosynthetic process | 4.20E-03 |
| 36 | GO:0006096: glycolytic process | 4.70E-03 |
| 37 | GO:0048316: seed development | 4.81E-03 |
| 38 | GO:0015031: protein transport | 6.62E-03 |
| 39 | GO:0009790: embryo development | 6.94E-03 |
| 40 | GO:0009409: response to cold | 7.05E-03 |
| 41 | GO:0010150: leaf senescence | 7.79E-03 |
| 42 | GO:0009793: embryo development ending in seed dormancy | 1.21E-02 |
| 43 | GO:0016192: vesicle-mediated transport | 1.28E-02 |
| 44 | GO:0006886: intracellular protein transport | 1.43E-02 |
| 45 | GO:0032259: methylation | 1.57E-02 |
| 46 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.04E-02 |
| 47 | GO:0009414: response to water deprivation | 3.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004764: shikimate 3-dehydrogenase (NADP+) activity | 0.00E+00 |
| 2 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0003855: 3-dehydroquinate dehydratase activity | 0.00E+00 |
| 4 | GO:0003756: protein disulfide isomerase activity | 7.34E-10 |
| 5 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.30E-07 |
| 6 | GO:0051082: unfolded protein binding | 1.33E-07 |
| 7 | GO:0005459: UDP-galactose transmembrane transporter activity | 4.42E-07 |
| 8 | GO:0004824: lysine-tRNA ligase activity | 1.21E-05 |
| 9 | GO:1990381: ubiquitin-specific protease binding | 1.21E-05 |
| 10 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.21E-05 |
| 11 | GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity | 3.21E-05 |
| 12 | GO:0042409: caffeoyl-CoA O-methyltransferase activity | 5.78E-05 |
| 13 | GO:0046527: glucosyltransferase activity | 1.22E-04 |
| 14 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 1.22E-04 |
| 15 | GO:0016615: malate dehydrogenase activity | 1.98E-04 |
| 16 | GO:0030060: L-malate dehydrogenase activity | 2.39E-04 |
| 17 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.95E-04 |
| 18 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.95E-04 |
| 19 | GO:0004743: pyruvate kinase activity | 4.69E-04 |
| 20 | GO:0030955: potassium ion binding | 4.69E-04 |
| 21 | GO:0008171: O-methyltransferase activity | 5.20E-04 |
| 22 | GO:0008194: UDP-glycosyltransferase activity | 6.14E-04 |
| 23 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.46E-03 |
| 24 | GO:0050661: NADP binding | 3.15E-03 |
| 25 | GO:0005198: structural molecule activity | 3.71E-03 |
| 26 | GO:0005509: calcium ion binding | 4.81E-03 |
| 27 | GO:0000287: magnesium ion binding | 1.04E-02 |
| 28 | GO:0016887: ATPase activity | 2.22E-02 |
| 29 | GO:0030246: carbohydrate binding | 3.02E-02 |
| 30 | GO:0008270: zinc ion binding | 3.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0005788: endoplasmic reticulum lumen | 9.75E-14 |
| 3 | GO:0005783: endoplasmic reticulum | 1.65E-10 |
| 4 | GO:0005774: vacuolar membrane | 1.78E-07 |
| 5 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.19E-05 |
| 6 | GO:0000836: Hrd1p ubiquitin ligase complex | 1.21E-05 |
| 7 | GO:0044322: endoplasmic reticulum quality control compartment | 1.21E-05 |
| 8 | GO:0036513: Derlin-1 retrotranslocation complex | 8.79E-05 |
| 9 | GO:0043231: intracellular membrane-bounded organelle | 1.36E-04 |
| 10 | GO:0030127: COPII vesicle coat | 1.98E-04 |
| 11 | GO:0030173: integral component of Golgi membrane | 2.39E-04 |
| 12 | GO:0000326: protein storage vacuole | 3.73E-04 |
| 13 | GO:0009507: chloroplast | 4.86E-04 |
| 14 | GO:0008541: proteasome regulatory particle, lid subcomplex | 5.71E-04 |
| 15 | GO:0009506: plasmodesma | 7.57E-04 |
| 16 | GO:0009505: plant-type cell wall | 8.54E-04 |
| 17 | GO:0009532: plastid stroma | 1.02E-03 |
| 18 | GO:0010319: stromule | 1.91E-03 |
| 19 | GO:0016020: membrane | 2.35E-03 |
| 20 | GO:0005829: cytosol | 2.86E-03 |
| 21 | GO:0000502: proteasome complex | 4.20E-03 |
| 22 | GO:0005773: vacuole | 5.20E-03 |
| 23 | GO:0005794: Golgi apparatus | 5.76E-03 |
| 24 | GO:0009570: chloroplast stroma | 6.79E-03 |
| 25 | GO:0005759: mitochondrial matrix | 7.30E-03 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 7.96E-03 |
| 27 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.13E-02 |
| 28 | GO:0048046: apoplast | 1.90E-02 |
| 29 | GO:0005886: plasma membrane | 2.24E-02 |
| 30 | GO:0009579: thylakoid | 2.77E-02 |
| 31 | GO:0009536: plastid | 4.67E-02 |