GO Enrichment Analysis of Co-expressed Genes with
AT5G41670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1900363: regulation of mRNA polyadenylation | 0.00E+00 |
| 2 | GO:0019481: L-alanine catabolic process, by transamination | 0.00E+00 |
| 3 | GO:0034628: 'de novo' NAD biosynthetic process from aspartate | 1.48E-05 |
| 4 | GO:0071277: cellular response to calcium ion | 1.48E-05 |
| 5 | GO:0006611: protein export from nucleus | 3.88E-05 |
| 6 | GO:0031124: mRNA 3'-end processing | 3.88E-05 |
| 7 | GO:0051176: positive regulation of sulfur metabolic process | 6.95E-05 |
| 8 | GO:0000055: ribosomal large subunit export from nucleus | 6.95E-05 |
| 9 | GO:0070475: rRNA base methylation | 6.95E-05 |
| 10 | GO:0051131: chaperone-mediated protein complex assembly | 1.05E-04 |
| 11 | GO:0010107: potassium ion import | 1.45E-04 |
| 12 | GO:0033320: UDP-D-xylose biosynthetic process | 1.45E-04 |
| 13 | GO:0009408: response to heat | 1.68E-04 |
| 14 | GO:0007029: endoplasmic reticulum organization | 1.88E-04 |
| 15 | GO:0009435: NAD biosynthetic process | 1.88E-04 |
| 16 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.88E-04 |
| 17 | GO:0006796: phosphate-containing compound metabolic process | 2.34E-04 |
| 18 | GO:0016070: RNA metabolic process | 2.34E-04 |
| 19 | GO:0000470: maturation of LSU-rRNA | 2.34E-04 |
| 20 | GO:0042732: D-xylose metabolic process | 2.34E-04 |
| 21 | GO:0043068: positive regulation of programmed cell death | 3.84E-04 |
| 22 | GO:0048658: anther wall tapetum development | 3.84E-04 |
| 23 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 4.37E-04 |
| 24 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 4.93E-04 |
| 25 | GO:0009060: aerobic respiration | 4.93E-04 |
| 26 | GO:0046685: response to arsenic-containing substance | 4.93E-04 |
| 27 | GO:0006457: protein folding | 5.05E-04 |
| 28 | GO:0006378: mRNA polyadenylation | 6.67E-04 |
| 29 | GO:0010015: root morphogenesis | 6.67E-04 |
| 30 | GO:0009225: nucleotide-sugar metabolic process | 9.19E-04 |
| 31 | GO:0061077: chaperone-mediated protein folding | 1.19E-03 |
| 32 | GO:0016226: iron-sulfur cluster assembly | 1.26E-03 |
| 33 | GO:0051028: mRNA transport | 1.49E-03 |
| 34 | GO:0010501: RNA secondary structure unwinding | 1.57E-03 |
| 35 | GO:0010118: stomatal movement | 1.57E-03 |
| 36 | GO:0006885: regulation of pH | 1.65E-03 |
| 37 | GO:0010090: trichome morphogenesis | 2.07E-03 |
| 38 | GO:0006904: vesicle docking involved in exocytosis | 2.24E-03 |
| 39 | GO:0001666: response to hypoxia | 2.42E-03 |
| 40 | GO:0009615: response to virus | 2.42E-03 |
| 41 | GO:0009816: defense response to bacterium, incompatible interaction | 2.52E-03 |
| 42 | GO:0009834: plant-type secondary cell wall biogenesis | 3.09E-03 |
| 43 | GO:0045087: innate immune response | 3.40E-03 |
| 44 | GO:0006887: exocytosis | 3.82E-03 |
| 45 | GO:0008283: cell proliferation | 4.04E-03 |
| 46 | GO:0009965: leaf morphogenesis | 4.37E-03 |
| 47 | GO:0006812: cation transport | 4.71E-03 |
| 48 | GO:0006813: potassium ion transport | 4.95E-03 |
| 49 | GO:0043086: negative regulation of catalytic activity | 5.55E-03 |
| 50 | GO:0009626: plant-type hypersensitive response | 5.80E-03 |
| 51 | GO:0006396: RNA processing | 6.44E-03 |
| 52 | GO:0009742: brassinosteroid mediated signaling pathway | 6.57E-03 |
| 53 | GO:0007166: cell surface receptor signaling pathway | 1.01E-02 |
| 54 | GO:0046686: response to cadmium ion | 1.04E-02 |
| 55 | GO:0009860: pollen tube growth | 1.32E-02 |
| 56 | GO:0080167: response to karrikin | 1.46E-02 |
| 57 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.35E-02 |
| 58 | GO:0009738: abscisic acid-activated signaling pathway | 2.83E-02 |
| 59 | GO:0009555: pollen development | 2.90E-02 |
| 60 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.61E-02 |
| 61 | GO:0009414: response to water deprivation | 4.71E-02 |
| 62 | GO:0042742: defense response to bacterium | 4.79E-02 |
| 63 | GO:0006979: response to oxidative stress | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008987: quinolinate synthetase A activity | 0.00E+00 |
| 2 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 1.48E-05 |
| 3 | GO:0017151: DEAD/H-box RNA helicase binding | 1.48E-05 |
| 4 | GO:0043023: ribosomal large subunit binding | 1.05E-04 |
| 5 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.05E-04 |
| 6 | GO:0002020: protease binding | 1.88E-04 |
| 7 | GO:0016462: pyrophosphatase activity | 2.34E-04 |
| 8 | GO:0048040: UDP-glucuronate decarboxylase activity | 2.34E-04 |
| 9 | GO:0070403: NAD+ binding | 2.82E-04 |
| 10 | GO:0004427: inorganic diphosphatase activity | 3.32E-04 |
| 11 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 3.84E-04 |
| 12 | GO:0051082: unfolded protein binding | 4.12E-04 |
| 13 | GO:0005515: protein binding | 5.13E-04 |
| 14 | GO:0008047: enzyme activator activity | 6.08E-04 |
| 15 | GO:0004521: endoribonuclease activity | 7.29E-04 |
| 16 | GO:0004867: serine-type endopeptidase inhibitor activity | 9.19E-04 |
| 17 | GO:0005451: monovalent cation:proton antiporter activity | 1.57E-03 |
| 18 | GO:0015299: solute:proton antiporter activity | 1.73E-03 |
| 19 | GO:0015385: sodium:proton antiporter activity | 2.07E-03 |
| 20 | GO:0004004: ATP-dependent RNA helicase activity | 2.70E-03 |
| 21 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.71E-03 |
| 22 | GO:0008026: ATP-dependent helicase activity | 6.57E-03 |
| 23 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 8.79E-03 |
| 24 | GO:0046910: pectinesterase inhibitor activity | 8.79E-03 |
| 25 | GO:0004842: ubiquitin-protein transferase activity | 9.21E-03 |
| 26 | GO:0003729: mRNA binding | 9.92E-03 |
| 27 | GO:0000287: magnesium ion binding | 1.24E-02 |
| 28 | GO:0003682: chromatin binding | 1.31E-02 |
| 29 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.66E-02 |
| 30 | GO:0042803: protein homodimerization activity | 1.72E-02 |
| 31 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.79E-02 |
| 32 | GO:0004519: endonuclease activity | 2.05E-02 |
| 33 | GO:0000166: nucleotide binding | 2.90E-02 |
| 34 | GO:0005524: ATP binding | 2.92E-02 |
| 35 | GO:0016740: transferase activity | 3.34E-02 |
| 36 | GO:0005516: calmodulin binding | 3.88E-02 |
| 37 | GO:0005509: calcium ion binding | 4.53E-02 |
| 38 | GO:0044212: transcription regulatory region DNA binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030688: preribosome, small subunit precursor | 1.48E-05 |
| 2 | GO:0031080: nuclear pore outer ring | 6.95E-05 |
| 3 | GO:0008287: protein serine/threonine phosphatase complex | 6.95E-05 |
| 4 | GO:0005847: mRNA cleavage and polyadenylation specificity factor complex | 1.88E-04 |
| 5 | GO:0016363: nuclear matrix | 2.82E-04 |
| 6 | GO:0005829: cytosol | 1.36E-03 |
| 7 | GO:0005730: nucleolus | 1.68E-03 |
| 8 | GO:0000145: exocyst | 1.98E-03 |
| 9 | GO:0032580: Golgi cisterna membrane | 2.15E-03 |
| 10 | GO:0048046: apoplast | 4.42E-03 |
| 11 | GO:0005618: cell wall | 4.92E-03 |
| 12 | GO:0005635: nuclear envelope | 5.19E-03 |
| 13 | GO:0005886: plasma membrane | 5.62E-03 |
| 14 | GO:0005615: extracellular space | 9.99E-03 |
| 15 | GO:0005743: mitochondrial inner membrane | 1.83E-02 |
| 16 | GO:0005774: vacuolar membrane | 2.32E-02 |
| 17 | GO:0022626: cytosolic ribosome | 2.81E-02 |
| 18 | GO:0005794: Golgi apparatus | 3.32E-02 |
| 19 | GO:0005773: vacuole | 3.55E-02 |
| 20 | GO:0005802: trans-Golgi network | 4.06E-02 |
| 21 | GO:0016020: membrane | 4.30E-02 |
| 22 | GO:0005768: endosome | 4.45E-02 |