GO Enrichment Analysis of Co-expressed Genes with
AT5G41210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 2 | GO:1900088: regulation of inositol biosynthetic process | 0.00E+00 |
| 3 | GO:1900091: regulation of raffinose biosynthetic process | 0.00E+00 |
| 4 | GO:0010336: gibberellic acid homeostasis | 0.00E+00 |
| 5 | GO:0045747: positive regulation of Notch signaling pathway | 0.00E+00 |
| 6 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 7 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 8 | GO:0006555: methionine metabolic process | 4.69E-05 |
| 9 | GO:0019509: L-methionine salvage from methylthioadenosine | 6.56E-05 |
| 10 | GO:0050790: regulation of catalytic activity | 8.77E-05 |
| 11 | GO:0071461: cellular response to redox state | 1.56E-04 |
| 12 | GO:0032956: regulation of actin cytoskeleton organization | 1.56E-04 |
| 13 | GO:0006567: threonine catabolic process | 1.56E-04 |
| 14 | GO:0006508: proteolysis | 2.06E-04 |
| 15 | GO:0055114: oxidation-reduction process | 2.62E-04 |
| 16 | GO:2000030: regulation of response to red or far red light | 3.55E-04 |
| 17 | GO:2000071: regulation of defense response by callose deposition | 3.55E-04 |
| 18 | GO:0080005: photosystem stoichiometry adjustment | 3.55E-04 |
| 19 | GO:0019388: galactose catabolic process | 3.55E-04 |
| 20 | GO:0007154: cell communication | 3.55E-04 |
| 21 | GO:0048571: long-day photoperiodism | 3.55E-04 |
| 22 | GO:0019441: tryptophan catabolic process to kynurenine | 3.55E-04 |
| 23 | GO:0080183: response to photooxidative stress | 3.55E-04 |
| 24 | GO:0016122: xanthophyll metabolic process | 3.55E-04 |
| 25 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.55E-04 |
| 26 | GO:0044210: 'de novo' CTP biosynthetic process | 5.82E-04 |
| 27 | GO:1901562: response to paraquat | 5.82E-04 |
| 28 | GO:0009150: purine ribonucleotide metabolic process | 5.82E-04 |
| 29 | GO:0031929: TOR signaling | 5.82E-04 |
| 30 | GO:0071492: cellular response to UV-A | 5.82E-04 |
| 31 | GO:0044375: regulation of peroxisome size | 5.82E-04 |
| 32 | GO:0051603: proteolysis involved in cellular protein catabolic process | 7.67E-04 |
| 33 | GO:0009399: nitrogen fixation | 8.33E-04 |
| 34 | GO:0009963: positive regulation of flavonoid biosynthetic process | 8.33E-04 |
| 35 | GO:0009647: skotomorphogenesis | 8.33E-04 |
| 36 | GO:0009590: detection of gravity | 8.33E-04 |
| 37 | GO:2001141: regulation of RNA biosynthetic process | 8.33E-04 |
| 38 | GO:0009765: photosynthesis, light harvesting | 1.10E-03 |
| 39 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.10E-03 |
| 40 | GO:0009649: entrainment of circadian clock | 1.10E-03 |
| 41 | GO:0034613: cellular protein localization | 1.10E-03 |
| 42 | GO:0006542: glutamine biosynthetic process | 1.10E-03 |
| 43 | GO:0070534: protein K63-linked ubiquitination | 1.10E-03 |
| 44 | GO:0006545: glycine biosynthetic process | 1.10E-03 |
| 45 | GO:0071486: cellular response to high light intensity | 1.10E-03 |
| 46 | GO:0006520: cellular amino acid metabolic process | 1.13E-03 |
| 47 | GO:0010117: photoprotection | 1.40E-03 |
| 48 | GO:0046283: anthocyanin-containing compound metabolic process | 1.40E-03 |
| 49 | GO:0009058: biosynthetic process | 1.61E-03 |
| 50 | GO:0070814: hydrogen sulfide biosynthetic process | 1.72E-03 |
| 51 | GO:0006796: phosphate-containing compound metabolic process | 1.72E-03 |
| 52 | GO:0006301: postreplication repair | 1.72E-03 |
| 53 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.72E-03 |
| 54 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 2.06E-03 |
| 55 | GO:0010189: vitamin E biosynthetic process | 2.06E-03 |
| 56 | GO:0042128: nitrate assimilation | 2.22E-03 |
| 57 | GO:0009396: folic acid-containing compound biosynthetic process | 2.42E-03 |
| 58 | GO:0010038: response to metal ion | 2.42E-03 |
| 59 | GO:0005978: glycogen biosynthetic process | 2.80E-03 |
| 60 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.80E-03 |
| 61 | GO:0030091: protein repair | 2.80E-03 |
| 62 | GO:0009231: riboflavin biosynthetic process | 2.80E-03 |
| 63 | GO:0006102: isocitrate metabolic process | 2.80E-03 |
| 64 | GO:0016559: peroxisome fission | 2.80E-03 |
| 65 | GO:0009880: embryonic pattern specification | 3.21E-03 |
| 66 | GO:0019430: removal of superoxide radicals | 3.21E-03 |
| 67 | GO:0071482: cellular response to light stimulus | 3.21E-03 |
| 68 | GO:0015996: chlorophyll catabolic process | 3.21E-03 |
| 69 | GO:0009853: photorespiration | 3.27E-03 |
| 70 | GO:0009821: alkaloid biosynthetic process | 3.63E-03 |
| 71 | GO:0015780: nucleotide-sugar transport | 3.63E-03 |
| 72 | GO:0035999: tetrahydrofolate interconversion | 4.06E-03 |
| 73 | GO:0009098: leucine biosynthetic process | 4.06E-03 |
| 74 | GO:0009970: cellular response to sulfate starvation | 4.52E-03 |
| 75 | GO:0000103: sulfate assimilation | 4.52E-03 |
| 76 | GO:0009688: abscisic acid biosynthetic process | 4.52E-03 |
| 77 | GO:0009641: shade avoidance | 4.52E-03 |
| 78 | GO:0009682: induced systemic resistance | 4.99E-03 |
| 79 | GO:0006879: cellular iron ion homeostasis | 4.99E-03 |
| 80 | GO:0006352: DNA-templated transcription, initiation | 4.99E-03 |
| 81 | GO:0048229: gametophyte development | 4.99E-03 |
| 82 | GO:0006790: sulfur compound metabolic process | 5.48E-03 |
| 83 | GO:0006006: glucose metabolic process | 5.98E-03 |
| 84 | GO:0050826: response to freezing | 5.98E-03 |
| 85 | GO:0005975: carbohydrate metabolic process | 6.52E-03 |
| 86 | GO:0007031: peroxisome organization | 7.04E-03 |
| 87 | GO:0009620: response to fungus | 7.36E-03 |
| 88 | GO:0019915: lipid storage | 9.34E-03 |
| 89 | GO:0061077: chaperone-mediated protein folding | 9.34E-03 |
| 90 | GO:0031408: oxylipin biosynthetic process | 9.34E-03 |
| 91 | GO:0016226: iron-sulfur cluster assembly | 9.96E-03 |
| 92 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.96E-03 |
| 93 | GO:0006012: galactose metabolic process | 1.06E-02 |
| 94 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.19E-02 |
| 95 | GO:0042391: regulation of membrane potential | 1.25E-02 |
| 96 | GO:0010051: xylem and phloem pattern formation | 1.25E-02 |
| 97 | GO:0010118: stomatal movement | 1.25E-02 |
| 98 | GO:0019252: starch biosynthetic process | 1.46E-02 |
| 99 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.54E-02 |
| 100 | GO:0002229: defense response to oomycetes | 1.54E-02 |
| 101 | GO:0019761: glucosinolate biosynthetic process | 1.61E-02 |
| 102 | GO:0030163: protein catabolic process | 1.68E-02 |
| 103 | GO:1901657: glycosyl compound metabolic process | 1.68E-02 |
| 104 | GO:0006464: cellular protein modification process | 1.76E-02 |
| 105 | GO:0048573: photoperiodism, flowering | 2.24E-02 |
| 106 | GO:0046686: response to cadmium ion | 2.31E-02 |
| 107 | GO:0010119: regulation of stomatal movement | 2.67E-02 |
| 108 | GO:0010043: response to zinc ion | 2.67E-02 |
| 109 | GO:0007568: aging | 2.67E-02 |
| 110 | GO:0009867: jasmonic acid mediated signaling pathway | 2.85E-02 |
| 111 | GO:0006099: tricarboxylic acid cycle | 2.94E-02 |
| 112 | GO:0009640: photomorphogenesis | 3.42E-02 |
| 113 | GO:0000209: protein polyubiquitination | 3.51E-02 |
| 114 | GO:0008643: carbohydrate transport | 3.61E-02 |
| 115 | GO:0032259: methylation | 3.79E-02 |
| 116 | GO:0031347: regulation of defense response | 3.91E-02 |
| 117 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.91E-02 |
| 118 | GO:0009809: lignin biosynthetic process | 4.22E-02 |
| 119 | GO:0009585: red, far-red light phototransduction | 4.22E-02 |
| 120 | GO:0010224: response to UV-B | 4.33E-02 |
| 121 | GO:0006857: oligopeptide transport | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050486: intramolecular transferase activity, transferring hydroxy groups | 0.00E+00 |
| 2 | GO:0047504: (-)-menthol dehydrogenase activity | 0.00E+00 |
| 3 | GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity | 0.00E+00 |
| 4 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 5 | GO:0047501: (+)-neomenthol dehydrogenase activity | 0.00E+00 |
| 6 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 7 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 8 | GO:0004180: carboxypeptidase activity | 4.44E-06 |
| 9 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 4.44E-06 |
| 10 | GO:0008106: alcohol dehydrogenase (NADP+) activity | 1.03E-05 |
| 11 | GO:0016491: oxidoreductase activity | 7.52E-05 |
| 12 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 1.56E-04 |
| 13 | GO:0004793: threonine aldolase activity | 1.56E-04 |
| 14 | GO:0016783: sulfurtransferase activity | 1.56E-04 |
| 15 | GO:0008732: L-allo-threonine aldolase activity | 1.56E-04 |
| 16 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.56E-04 |
| 17 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 1.56E-04 |
| 18 | GO:0046480: galactolipid galactosyltransferase activity | 1.56E-04 |
| 19 | GO:0080079: cellobiose glucosidase activity | 1.56E-04 |
| 20 | GO:0004046: aminoacylase activity | 3.55E-04 |
| 21 | GO:0003988: acetyl-CoA C-acyltransferase activity | 3.55E-04 |
| 22 | GO:0004061: arylformamidase activity | 3.55E-04 |
| 23 | GO:0004614: phosphoglucomutase activity | 3.55E-04 |
| 24 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 3.55E-04 |
| 25 | GO:0016868: intramolecular transferase activity, phosphotransferases | 3.55E-04 |
| 26 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 3.55E-04 |
| 27 | GO:0004848: ureidoglycolate hydrolase activity | 5.82E-04 |
| 28 | GO:0004557: alpha-galactosidase activity | 5.82E-04 |
| 29 | GO:0003861: 3-isopropylmalate dehydratase activity | 5.82E-04 |
| 30 | GO:0003935: GTP cyclohydrolase II activity | 5.82E-04 |
| 31 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 5.82E-04 |
| 32 | GO:0004792: thiosulfate sulfurtransferase activity | 8.33E-04 |
| 33 | GO:0003883: CTP synthase activity | 8.33E-04 |
| 34 | GO:0047627: adenylylsulfatase activity | 8.33E-04 |
| 35 | GO:0016987: sigma factor activity | 1.10E-03 |
| 36 | GO:0001053: plastid sigma factor activity | 1.10E-03 |
| 37 | GO:0004356: glutamate-ammonia ligase activity | 1.40E-03 |
| 38 | GO:0004197: cysteine-type endopeptidase activity | 1.48E-03 |
| 39 | GO:0004784: superoxide dismutase activity | 1.72E-03 |
| 40 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.72E-03 |
| 41 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.72E-03 |
| 42 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.72E-03 |
| 43 | GO:0005261: cation channel activity | 2.06E-03 |
| 44 | GO:0004427: inorganic diphosphatase activity | 2.42E-03 |
| 45 | GO:0016621: cinnamoyl-CoA reductase activity | 2.42E-03 |
| 46 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.42E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 2.46E-03 |
| 48 | GO:0004034: aldose 1-epimerase activity | 2.80E-03 |
| 49 | GO:0071949: FAD binding | 3.63E-03 |
| 50 | GO:0000287: magnesium ion binding | 3.83E-03 |
| 51 | GO:0016788: hydrolase activity, acting on ester bonds | 4.02E-03 |
| 52 | GO:0016844: strictosidine synthase activity | 4.06E-03 |
| 53 | GO:0004129: cytochrome-c oxidase activity | 4.99E-03 |
| 54 | GO:0008378: galactosyltransferase activity | 5.48E-03 |
| 55 | GO:0031072: heat shock protein binding | 5.98E-03 |
| 56 | GO:0008234: cysteine-type peptidase activity | 6.27E-03 |
| 57 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.50E-03 |
| 58 | GO:0030552: cAMP binding | 7.04E-03 |
| 59 | GO:0030553: cGMP binding | 7.04E-03 |
| 60 | GO:0022857: transmembrane transporter activity | 7.59E-03 |
| 61 | GO:0051082: unfolded protein binding | 8.06E-03 |
| 62 | GO:0005528: FK506 binding | 8.16E-03 |
| 63 | GO:0005216: ion channel activity | 8.74E-03 |
| 64 | GO:0004176: ATP-dependent peptidase activity | 9.34E-03 |
| 65 | GO:0016829: lyase activity | 1.09E-02 |
| 66 | GO:0030551: cyclic nucleotide binding | 1.25E-02 |
| 67 | GO:0005249: voltage-gated potassium channel activity | 1.25E-02 |
| 68 | GO:0003824: catalytic activity | 1.37E-02 |
| 69 | GO:0050662: coenzyme binding | 1.39E-02 |
| 70 | GO:0016853: isomerase activity | 1.39E-02 |
| 71 | GO:0048038: quinone binding | 1.54E-02 |
| 72 | GO:0042802: identical protein binding | 1.78E-02 |
| 73 | GO:0008237: metallopeptidase activity | 1.84E-02 |
| 74 | GO:0016168: chlorophyll binding | 2.07E-02 |
| 75 | GO:0030247: polysaccharide binding | 2.24E-02 |
| 76 | GO:0004222: metalloendopeptidase activity | 2.58E-02 |
| 77 | GO:0008233: peptidase activity | 2.64E-02 |
| 78 | GO:0061630: ubiquitin protein ligase activity | 2.83E-02 |
| 79 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.85E-02 |
| 80 | GO:0052689: carboxylic ester hydrolase activity | 2.97E-02 |
| 81 | GO:0008422: beta-glucosidase activity | 3.04E-02 |
| 82 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.13E-02 |
| 83 | GO:0004185: serine-type carboxypeptidase activity | 3.42E-02 |
| 84 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.81E-02 |
| 85 | GO:0051287: NAD binding | 3.91E-02 |
| 86 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.22E-02 |
| 87 | GO:0016298: lipase activity | 4.33E-02 |
| 88 | GO:0031625: ubiquitin protein ligase binding | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097708: intracellular vesicle | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.21E-06 |
| 3 | GO:0005773: vacuole | 1.72E-05 |
| 4 | GO:0000152: nuclear ubiquitin ligase complex | 1.56E-04 |
| 5 | GO:0031932: TORC2 complex | 1.56E-04 |
| 6 | GO:0031972: chloroplast intermembrane space | 1.56E-04 |
| 7 | GO:0005829: cytosol | 3.11E-04 |
| 8 | GO:0005764: lysosome | 4.23E-04 |
| 9 | GO:0009570: chloroplast stroma | 5.47E-04 |
| 10 | GO:0031931: TORC1 complex | 5.82E-04 |
| 11 | GO:0042646: plastid nucleoid | 8.33E-04 |
| 12 | GO:0005747: mitochondrial respiratory chain complex I | 9.40E-04 |
| 13 | GO:0009517: PSII associated light-harvesting complex II | 1.10E-03 |
| 14 | GO:0031372: UBC13-MMS2 complex | 1.10E-03 |
| 15 | GO:0005777: peroxisome | 1.16E-03 |
| 16 | GO:0031463: Cul3-RING ubiquitin ligase complex | 1.72E-03 |
| 17 | GO:0010319: stromule | 1.78E-03 |
| 18 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.06E-03 |
| 19 | GO:0031359: integral component of chloroplast outer membrane | 2.42E-03 |
| 20 | GO:0009501: amyloplast | 2.80E-03 |
| 21 | GO:0005779: integral component of peroxisomal membrane | 3.21E-03 |
| 22 | GO:0042644: chloroplast nucleoid | 3.63E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.63E-03 |
| 24 | GO:0031090: organelle membrane | 3.63E-03 |
| 25 | GO:0016604: nuclear body | 4.06E-03 |
| 26 | GO:0045271: respiratory chain complex I | 8.74E-03 |
| 27 | GO:0009532: plastid stroma | 9.34E-03 |
| 28 | GO:0005759: mitochondrial matrix | 1.27E-02 |
| 29 | GO:0009535: chloroplast thylakoid membrane | 1.28E-02 |
| 30 | GO:0005737: cytoplasm | 1.31E-02 |
| 31 | GO:0005783: endoplasmic reticulum | 1.37E-02 |
| 32 | GO:0009523: photosystem II | 1.46E-02 |
| 33 | GO:0005615: extracellular space | 1.56E-02 |
| 34 | GO:0009536: plastid | 1.62E-02 |
| 35 | GO:0009941: chloroplast envelope | 1.66E-02 |
| 36 | GO:0009295: nucleoid | 1.84E-02 |
| 37 | GO:0005778: peroxisomal membrane | 1.84E-02 |
| 38 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.38E-02 |
| 39 | GO:0009707: chloroplast outer membrane | 2.41E-02 |
| 40 | GO:0031969: chloroplast membrane | 2.69E-02 |
| 41 | GO:0048046: apoplast | 2.91E-02 |
| 42 | GO:0031966: mitochondrial membrane | 4.01E-02 |
| 43 | GO:0016607: nuclear speck | 4.86E-02 |