Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G40540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045595: regulation of cell differentiation0.00E+00
2GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
3GO:0046398: UDP-glucuronate metabolic process0.00E+00
4GO:0052573: UDP-D-galactose metabolic process0.00E+00
5GO:0006811: ion transport2.59E-05
6GO:0009865: pollen tube adhesion4.45E-05
7GO:0006970: response to osmotic stress4.49E-05
8GO:0010507: negative regulation of autophagy1.10E-04
9GO:0031407: oxylipin metabolic process1.10E-04
10GO:0009414: response to water deprivation1.38E-04
11GO:0090630: activation of GTPase activity1.89E-04
12GO:0006011: UDP-glucose metabolic process1.89E-04
13GO:0080168: abscisic acid transport1.89E-04
14GO:0010371: regulation of gibberellin biosynthetic process2.78E-04
15GO:0009226: nucleotide-sugar biosynthetic process2.78E-04
16GO:0033356: UDP-L-arabinose metabolic process3.73E-04
17GO:0006873: cellular ion homeostasis4.75E-04
18GO:0009247: glycolipid biosynthetic process4.75E-04
19GO:0045487: gibberellin catabolic process4.75E-04
20GO:0006796: phosphate-containing compound metabolic process5.82E-04
21GO:1900425: negative regulation of defense response to bacterium5.82E-04
22GO:0009737: response to abscisic acid6.01E-04
23GO:0051707: response to other organism8.29E-04
24GO:0019375: galactolipid biosynthetic process9.32E-04
25GO:0009415: response to water9.32E-04
26GO:2000070: regulation of response to water deprivation9.32E-04
27GO:2000280: regulation of root development1.32E-03
28GO:0009873: ethylene-activated signaling pathway1.39E-03
29GO:0055062: phosphate ion homeostasis1.47E-03
30GO:0018119: peptidyl-cysteine S-nitrosylation1.61E-03
31GO:0010015: root morphogenesis1.61E-03
32GO:0050826: response to freezing1.92E-03
33GO:0018107: peptidyl-threonine phosphorylation1.92E-03
34GO:0070588: calcium ion transmembrane transport2.25E-03
35GO:0009695: jasmonic acid biosynthetic process2.77E-03
36GO:0009269: response to desiccation2.96E-03
37GO:0031408: oxylipin biosynthetic process2.96E-03
38GO:0010017: red or far-red light signaling pathway3.14E-03
39GO:0009686: gibberellin biosynthetic process3.33E-03
40GO:0048868: pollen tube development4.14E-03
41GO:0071472: cellular response to salt stress4.14E-03
42GO:0006814: sodium ion transport4.35E-03
43GO:0009749: response to glucose4.56E-03
44GO:0050832: defense response to fungus4.75E-03
45GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.77E-03
46GO:0019760: glucosinolate metabolic process5.45E-03
47GO:0009639: response to red or far red light5.45E-03
48GO:0010286: heat acclimation5.68E-03
49GO:0010027: thylakoid membrane organization6.15E-03
50GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.39E-03
51GO:0016049: cell growth7.14E-03
52GO:0009751: response to salicylic acid7.27E-03
53GO:0009409: response to cold7.42E-03
54GO:0009631: cold acclimation8.18E-03
55GO:0005975: carbohydrate metabolic process8.58E-03
56GO:0046686: response to cadmium ion8.87E-03
57GO:0006631: fatty acid metabolic process9.83E-03
58GO:0006855: drug transmembrane transport1.16E-02
59GO:0006812: cation transport1.22E-02
60GO:0009846: pollen germination1.22E-02
61GO:0042538: hyperosmotic salinity response1.22E-02
62GO:0009736: cytokinin-activated signaling pathway1.28E-02
63GO:0006813: potassium ion transport1.28E-02
64GO:0009555: pollen development1.31E-02
65GO:0009611: response to wounding1.34E-02
66GO:0042545: cell wall modification1.61E-02
67GO:0009624: response to nematode1.65E-02
68GO:0055085: transmembrane transport1.67E-02
69GO:0018105: peptidyl-serine phosphorylation1.68E-02
70GO:0016567: protein ubiquitination2.07E-02
71GO:0009790: embryo development2.16E-02
72GO:0009651: response to salt stress2.34E-02
73GO:0010150: leaf senescence2.43E-02
74GO:0045490: pectin catabolic process2.43E-02
75GO:0009739: response to gibberellin2.63E-02
76GO:0071555: cell wall organization2.66E-02
77GO:0010468: regulation of gene expression2.76E-02
78GO:0006351: transcription, DNA-templated2.87E-02
79GO:0006355: regulation of transcription, DNA-templated2.90E-02
80GO:0080167: response to karrikin3.87E-02
81GO:0010200: response to chitin3.96E-02
82GO:0045454: cell redox homeostasis4.40E-02
RankGO TermAdjusted P value
1GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity0.00E+00
2GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity0.00E+00
3GO:0047350: glucuronate-1-phosphate uridylyltransferase activity0.00E+00
4GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity0.00E+00
5GO:0017048: Rho GTPase binding0.00E+00
6GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity0.00E+00
7GO:0090440: abscisic acid transporter activity4.45E-05
8GO:0016629: 12-oxophytodienoate reductase activity1.10E-04
9GO:0001047: core promoter binding1.10E-04
10GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity1.10E-04
11GO:0044212: transcription regulatory region DNA binding1.45E-04
12GO:0046423: allene-oxide cyclase activity1.89E-04
13GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.89E-04
14GO:0015297: antiporter activity2.55E-04
15GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity2.78E-04
16GO:0005432: calcium:sodium antiporter activity2.78E-04
17GO:0035250: UDP-galactosyltransferase activity2.78E-04
18GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.75E-04
19GO:0004427: inorganic diphosphatase activity8.11E-04
20GO:0015491: cation:cation antiporter activity9.32E-04
21GO:0008308: voltage-gated anion channel activity1.06E-03
22GO:0005388: calcium-transporting ATPase activity1.92E-03
23GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.09E-03
24GO:0004857: enzyme inhibitor activity2.60E-03
25GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.94E-03
26GO:0010181: FMN binding4.35E-03
27GO:0005096: GTPase activator activity7.65E-03
28GO:0015238: drug transmembrane transporter activity7.65E-03
29GO:0043565: sequence-specific DNA binding1.08E-02
30GO:0003700: transcription factor activity, sequence-specific DNA binding1.08E-02
31GO:0043621: protein self-association1.10E-02
32GO:0035091: phosphatidylinositol binding1.10E-02
33GO:0045330: aspartyl esterase activity1.38E-02
34GO:0030599: pectinesterase activity1.58E-02
35GO:0005516: calmodulin binding1.98E-02
36GO:0008194: UDP-glycosyltransferase activity2.63E-02
37GO:0005215: transporter activity2.95E-02
38GO:0000287: magnesium ion binding3.27E-02
39GO:0004842: ubiquitin-protein transferase activity3.68E-02
40GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.40E-02
41GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.74E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle4.45E-05
2GO:0045177: apical part of cell2.78E-04
3GO:0031225: anchored component of membrane6.21E-04
4GO:0090406: pollen tube8.29E-04
5GO:0005938: cell cortex1.92E-03
6GO:0046658: anchored component of plasma membrane3.47E-03
7GO:0005770: late endosome4.14E-03
8GO:0031902: late endosome membrane9.83E-03
9GO:0009706: chloroplast inner membrane1.65E-02
10GO:0005618: cell wall2.88E-02
11GO:0009941: chloroplast envelope3.56E-02
12GO:0005874: microtubule3.78E-02
13GO:0031969: chloroplast membrane3.87E-02
14GO:0009506: plasmodesma4.41E-02
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Gene type



Gene DE type