Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G39660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010243: response to organonitrogen compound0.00E+00
2GO:0007623: circadian rhythm4.29E-12
3GO:0010100: negative regulation of photomorphogenesis1.47E-09
4GO:0042754: negative regulation of circadian rhythm5.09E-09
5GO:0009909: regulation of flower development1.37E-08
6GO:0048574: long-day photoperiodism, flowering1.01E-06
7GO:0006355: regulation of transcription, DNA-templated4.29E-06
8GO:0006351: transcription, DNA-templated1.06E-05
9GO:0043496: regulation of protein homodimerization activity1.83E-05
10GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity5.17E-05
11GO:0071483: cellular response to blue light7.23E-05
12GO:0010600: regulation of auxin biosynthetic process7.23E-05
13GO:0009640: photomorphogenesis7.57E-05
14GO:0070370: cellular heat acclimation1.74E-04
15GO:0009821: alkaloid biosynthetic process2.64E-04
16GO:0009739: response to gibberellin3.07E-04
17GO:0009785: blue light signaling pathway4.30E-04
18GO:0009723: response to ethylene4.87E-04
19GO:0045892: negative regulation of transcription, DNA-templated6.29E-04
20GO:0010017: red or far-red light signaling pathway6.92E-04
21GO:0009751: response to salicylic acid7.46E-04
22GO:0009753: response to jasmonic acid8.08E-04
23GO:0042752: regulation of circadian rhythm9.39E-04
24GO:0009851: auxin biosynthetic process9.82E-04
25GO:0009416: response to light stimulus1.30E-03
26GO:0016126: sterol biosynthetic process1.30E-03
27GO:0006865: amino acid transport1.76E-03
28GO:0010224: response to UV-B2.68E-03
29GO:0009733: response to auxin2.89E-03
30GO:0009624: response to nematode3.32E-03
31GO:0009409: response to cold3.48E-03
32GO:0046686: response to cadmium ion4.00E-03
33GO:0009058: biosynthetic process4.01E-03
34GO:0010228: vegetative to reproductive phase transition of meristem4.97E-03
35GO:0010468: regulation of gene expression5.44E-03
36GO:0009737: response to abscisic acid5.46E-03
37GO:0009658: chloroplast organization6.50E-03
38GO:0010200: response to chitin7.73E-03
39GO:0009651: response to salt stress8.59E-03
40GO:0009734: auxin-activated signaling pathway1.26E-02
41GO:0045893: positive regulation of transcription, DNA-templated1.64E-02
RankGO TermAdjusted P value
1GO:0000989: transcription factor activity, transcription factor binding2.12E-09
2GO:0003700: transcription factor activity, sequence-specific DNA binding4.12E-08
3GO:0019904: protein domain specific binding2.46E-06
4GO:0008270: zinc ion binding9.13E-06
5GO:0015173: aromatic amino acid transmembrane transporter activity1.83E-05
6GO:0015175: neutral amino acid transmembrane transporter activity5.17E-05
7GO:0004506: squalene monooxygenase activity7.23E-05
8GO:0030674: protein binding, bridging2.03E-04
9GO:0016844: strictosidine synthase activity2.95E-04
10GO:0004527: exonuclease activity8.97E-04
11GO:0015171: amino acid transmembrane transporter activity2.80E-03
12GO:0003677: DNA binding3.10E-03
13GO:0042802: identical protein binding5.68E-03
14GO:0050660: flavin adenine dinucleotide binding7.20E-03
15GO:0005515: protein binding8.29E-03
16GO:0004519: endonuclease activity1.05E-02
17GO:0005509: calcium ion binding2.32E-02
18GO:0044212: transcription regulatory region DNA binding2.46E-02
RankGO TermAdjusted P value
1GO:0005783: endoplasmic reticulum1.80E-02
2GO:0005634: nucleus1.96E-02
3GO:0005622: intracellular2.24E-02
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Gene type



Gene DE type