GO Enrichment Analysis of Co-expressed Genes with
AT5G39210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006907: pinocytosis | 0.00E+00 |
| 2 | GO:0009249: protein lipoylation | 0.00E+00 |
| 3 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 5 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 6 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 7 | GO:0071454: cellular response to anoxia | 8.43E-05 |
| 8 | GO:0048438: floral whorl development | 8.43E-05 |
| 9 | GO:0045037: protein import into chloroplast stroma | 1.37E-04 |
| 10 | GO:0019253: reductive pentose-phosphate cycle | 1.80E-04 |
| 11 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 2.00E-04 |
| 12 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 2.00E-04 |
| 13 | GO:1900871: chloroplast mRNA modification | 2.00E-04 |
| 14 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 2.00E-04 |
| 15 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.84E-04 |
| 16 | GO:0090307: mitotic spindle assembly | 4.84E-04 |
| 17 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 4.84E-04 |
| 18 | GO:0033014: tetrapyrrole biosynthetic process | 4.84E-04 |
| 19 | GO:0071483: cellular response to blue light | 6.44E-04 |
| 20 | GO:0031935: regulation of chromatin silencing | 6.44E-04 |
| 21 | GO:0031122: cytoplasmic microtubule organization | 6.44E-04 |
| 22 | GO:0009107: lipoate biosynthetic process | 8.14E-04 |
| 23 | GO:0016123: xanthophyll biosynthetic process | 8.14E-04 |
| 24 | GO:0016126: sterol biosynthetic process | 8.91E-04 |
| 25 | GO:0000741: karyogamy | 9.94E-04 |
| 26 | GO:0042793: transcription from plastid promoter | 9.94E-04 |
| 27 | GO:0015977: carbon fixation | 1.18E-03 |
| 28 | GO:0010076: maintenance of floral meristem identity | 1.18E-03 |
| 29 | GO:0017148: negative regulation of translation | 1.18E-03 |
| 30 | GO:0009658: chloroplast organization | 1.36E-03 |
| 31 | GO:0010196: nonphotochemical quenching | 1.39E-03 |
| 32 | GO:0080111: DNA demethylation | 1.39E-03 |
| 33 | GO:0009704: de-etiolation | 1.60E-03 |
| 34 | GO:0042255: ribosome assembly | 1.60E-03 |
| 35 | GO:0006353: DNA-templated transcription, termination | 1.60E-03 |
| 36 | GO:0071482: cellular response to light stimulus | 1.83E-03 |
| 37 | GO:0022900: electron transport chain | 1.83E-03 |
| 38 | GO:0006783: heme biosynthetic process | 2.06E-03 |
| 39 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.30E-03 |
| 40 | GO:1900865: chloroplast RNA modification | 2.30E-03 |
| 41 | GO:0006535: cysteine biosynthetic process from serine | 2.56E-03 |
| 42 | GO:0006352: DNA-templated transcription, initiation | 2.82E-03 |
| 43 | GO:0010582: floral meristem determinacy | 3.09E-03 |
| 44 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 3.09E-03 |
| 45 | GO:0009767: photosynthetic electron transport chain | 3.37E-03 |
| 46 | GO:0009266: response to temperature stimulus | 3.66E-03 |
| 47 | GO:0034605: cellular response to heat | 3.66E-03 |
| 48 | GO:0010207: photosystem II assembly | 3.66E-03 |
| 49 | GO:0090351: seedling development | 3.95E-03 |
| 50 | GO:0006289: nucleotide-excision repair | 4.57E-03 |
| 51 | GO:0019344: cysteine biosynthetic process | 4.57E-03 |
| 52 | GO:0007017: microtubule-based process | 4.89E-03 |
| 53 | GO:0009451: RNA modification | 6.15E-03 |
| 54 | GO:0070417: cellular response to cold | 6.60E-03 |
| 55 | GO:0008033: tRNA processing | 6.97E-03 |
| 56 | GO:0010197: polar nucleus fusion | 7.34E-03 |
| 57 | GO:0009958: positive gravitropism | 7.34E-03 |
| 58 | GO:0032502: developmental process | 8.90E-03 |
| 59 | GO:0016032: viral process | 8.90E-03 |
| 60 | GO:0042254: ribosome biogenesis | 9.48E-03 |
| 61 | GO:0006464: cellular protein modification process | 9.72E-03 |
| 62 | GO:0000910: cytokinesis | 1.06E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 1.17E-02 |
| 64 | GO:0000160: phosphorelay signal transduction system | 1.37E-02 |
| 65 | GO:0010218: response to far red light | 1.42E-02 |
| 66 | GO:0009910: negative regulation of flower development | 1.47E-02 |
| 67 | GO:0009637: response to blue light | 1.57E-02 |
| 68 | GO:0009853: photorespiration | 1.57E-02 |
| 69 | GO:0010114: response to red light | 1.88E-02 |
| 70 | GO:0009744: response to sucrose | 1.88E-02 |
| 71 | GO:0000165: MAPK cascade | 2.15E-02 |
| 72 | GO:0009846: pollen germination | 2.21E-02 |
| 73 | GO:0009736: cytokinin-activated signaling pathway | 2.32E-02 |
| 74 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.38E-02 |
| 75 | GO:0006810: transport | 2.39E-02 |
| 76 | GO:0006417: regulation of translation | 2.50E-02 |
| 77 | GO:0006396: RNA processing | 3.05E-02 |
| 78 | GO:0045893: positive regulation of transcription, DNA-templated | 3.48E-02 |
| 79 | GO:0009790: embryo development | 3.91E-02 |
| 80 | GO:0007166: cell surface receptor signaling pathway | 4.84E-02 |
| 81 | GO:0008380: RNA splicing | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047793: cycloeucalenol cycloisomerase activity | 0.00E+00 |
| 2 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 3 | GO:0017118: lipoyltransferase activity | 3.86E-07 |
| 4 | GO:0004325: ferrochelatase activity | 8.43E-05 |
| 5 | GO:0050017: L-3-cyanoalanine synthase activity | 2.00E-04 |
| 6 | GO:0016415: octanoyltransferase activity | 2.00E-04 |
| 7 | GO:0004848: ureidoglycolate hydrolase activity | 3.35E-04 |
| 8 | GO:0000900: translation repressor activity, nucleic acid binding | 3.35E-04 |
| 9 | GO:0043023: ribosomal large subunit binding | 4.84E-04 |
| 10 | GO:0016984: ribulose-bisphosphate carboxylase activity | 4.84E-04 |
| 11 | GO:0000254: C-4 methylsterol oxidase activity | 4.84E-04 |
| 12 | GO:0048038: quinone binding | 6.25E-04 |
| 13 | GO:0001053: plastid sigma factor activity | 6.44E-04 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.44E-04 |
| 15 | GO:0016987: sigma factor activity | 6.44E-04 |
| 16 | GO:0043015: gamma-tubulin binding | 6.44E-04 |
| 17 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 6.44E-04 |
| 18 | GO:0008374: O-acyltransferase activity | 8.14E-04 |
| 19 | GO:0051011: microtubule minus-end binding | 8.14E-04 |
| 20 | GO:0004124: cysteine synthase activity | 1.18E-03 |
| 21 | GO:0015631: tubulin binding | 1.18E-03 |
| 22 | GO:0004525: ribonuclease III activity | 1.60E-03 |
| 23 | GO:0003690: double-stranded DNA binding | 2.55E-03 |
| 24 | GO:0003777: microtubule motor activity | 2.73E-03 |
| 25 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.66E-03 |
| 26 | GO:0004190: aspartic-type endopeptidase activity | 3.95E-03 |
| 27 | GO:0019843: rRNA binding | 4.37E-03 |
| 28 | GO:0008565: protein transporter activity | 5.22E-03 |
| 29 | GO:0003727: single-stranded RNA binding | 6.24E-03 |
| 30 | GO:0010181: FMN binding | 7.72E-03 |
| 31 | GO:0016740: transferase activity | 7.73E-03 |
| 32 | GO:0004518: nuclease activity | 8.90E-03 |
| 33 | GO:0000156: phosphorelay response regulator activity | 9.30E-03 |
| 34 | GO:0005200: structural constituent of cytoskeleton | 1.01E-02 |
| 35 | GO:0003746: translation elongation factor activity | 1.57E-02 |
| 36 | GO:0004519: endonuclease activity | 1.86E-02 |
| 37 | GO:0004185: serine-type carboxypeptidase activity | 1.88E-02 |
| 38 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.99E-02 |
| 39 | GO:0016491: oxidoreductase activity | 2.08E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.32E-02 |
| 41 | GO:0003723: RNA binding | 2.52E-02 |
| 42 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.68E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 3.77E-02 |
| 44 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.84E-02 |
| 45 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.19E-02 |
| 46 | GO:0008017: microtubule binding | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.49E-10 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.11E-07 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.88E-05 |
| 4 | GO:0008274: gamma-tubulin ring complex | 2.00E-04 |
| 5 | GO:0009573: chloroplast ribulose bisphosphate carboxylase complex | 3.35E-04 |
| 6 | GO:0009706: chloroplast inner membrane | 3.98E-04 |
| 7 | GO:0000923: equatorial microtubule organizing center | 4.84E-04 |
| 8 | GO:0030286: dynein complex | 6.44E-04 |
| 9 | GO:0030660: Golgi-associated vesicle membrane | 6.44E-04 |
| 10 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 6.44E-04 |
| 11 | GO:0055035: plastid thylakoid membrane | 8.14E-04 |
| 12 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.18E-03 |
| 13 | GO:0000123: histone acetyltransferase complex | 1.39E-03 |
| 14 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.60E-03 |
| 15 | GO:0000922: spindle pole | 2.06E-03 |
| 16 | GO:0005765: lysosomal membrane | 2.82E-03 |
| 17 | GO:0009508: plastid chromosome | 3.37E-03 |
| 18 | GO:0005875: microtubule associated complex | 4.26E-03 |
| 19 | GO:0043234: protein complex | 4.26E-03 |
| 20 | GO:0005623: cell | 4.48E-03 |
| 21 | GO:0009536: plastid | 4.49E-03 |
| 22 | GO:0042651: thylakoid membrane | 4.89E-03 |
| 23 | GO:0015935: small ribosomal subunit | 5.22E-03 |
| 24 | GO:0009295: nucleoid | 1.01E-02 |
| 25 | GO:0005874: microtubule | 1.12E-02 |
| 26 | GO:0031969: chloroplast membrane | 1.16E-02 |
| 27 | GO:0005819: spindle | 1.67E-02 |
| 28 | GO:0009570: chloroplast stroma | 1.88E-02 |
| 29 | GO:0043231: intracellular membrane-bounded organelle | 1.89E-02 |
| 30 | GO:0031966: mitochondrial membrane | 2.21E-02 |
| 31 | GO:0009579: thylakoid | 3.63E-02 |
| 32 | GO:0005773: vacuole | 4.01E-02 |
| 33 | GO:0009705: plant-type vacuole membrane | 4.40E-02 |
| 34 | GO:0031225: anchored component of membrane | 4.71E-02 |