GO Enrichment Analysis of Co-expressed Genes with
AT5G38900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010398: xylogalacturonan metabolic process | 0.00E+00 |
| 2 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 3 | GO:1902325: negative regulation of chlorophyll biosynthetic process | 0.00E+00 |
| 4 | GO:0072722: response to amitrole | 0.00E+00 |
| 5 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 6 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 7 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 8 | GO:0055114: oxidation-reduction process | 1.40E-05 |
| 9 | GO:0046686: response to cadmium ion | 1.41E-05 |
| 10 | GO:0006099: tricarboxylic acid cycle | 2.22E-05 |
| 11 | GO:0006623: protein targeting to vacuole | 8.23E-05 |
| 12 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 9.94E-05 |
| 13 | GO:0006106: fumarate metabolic process | 1.44E-04 |
| 14 | GO:0032107: regulation of response to nutrient levels | 1.44E-04 |
| 15 | GO:0009820: alkaloid metabolic process | 1.44E-04 |
| 16 | GO:0010365: positive regulation of ethylene biosynthetic process | 1.44E-04 |
| 17 | GO:0051775: response to redox state | 1.44E-04 |
| 18 | GO:0042964: thioredoxin reduction | 1.44E-04 |
| 19 | GO:0010112: regulation of systemic acquired resistance | 1.53E-04 |
| 20 | GO:0006032: chitin catabolic process | 2.18E-04 |
| 21 | GO:0000272: polysaccharide catabolic process | 2.54E-04 |
| 22 | GO:0009682: induced systemic resistance | 2.54E-04 |
| 23 | GO:0009407: toxin catabolic process | 2.60E-04 |
| 24 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 3.29E-04 |
| 25 | GO:0044419: interspecies interaction between organisms | 3.29E-04 |
| 26 | GO:0002237: response to molecule of bacterial origin | 3.77E-04 |
| 27 | GO:0009636: response to toxic substance | 5.06E-04 |
| 28 | GO:0009410: response to xenobiotic stimulus | 5.40E-04 |
| 29 | GO:0010272: response to silver ion | 5.40E-04 |
| 30 | GO:0006874: cellular calcium ion homeostasis | 5.75E-04 |
| 31 | GO:0016998: cell wall macromolecule catabolic process | 6.31E-04 |
| 32 | GO:0006979: response to oxidative stress | 6.48E-04 |
| 33 | GO:0010731: protein glutathionylation | 7.73E-04 |
| 34 | GO:0009413: response to flooding | 7.73E-04 |
| 35 | GO:0070301: cellular response to hydrogen peroxide | 7.73E-04 |
| 36 | GO:0006096: glycolytic process | 7.84E-04 |
| 37 | GO:0044550: secondary metabolite biosynthetic process | 9.05E-04 |
| 38 | GO:0051365: cellular response to potassium ion starvation | 1.02E-03 |
| 39 | GO:1901002: positive regulation of response to salt stress | 1.02E-03 |
| 40 | GO:0006869: lipid transport | 1.20E-03 |
| 41 | GO:0006564: L-serine biosynthetic process | 1.29E-03 |
| 42 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.29E-03 |
| 43 | GO:0006014: D-ribose metabolic process | 1.59E-03 |
| 44 | GO:0009228: thiamine biosynthetic process | 1.59E-03 |
| 45 | GO:0051607: defense response to virus | 1.68E-03 |
| 46 | GO:0010019: chloroplast-nucleus signaling pathway | 1.91E-03 |
| 47 | GO:0009648: photoperiodism | 1.91E-03 |
| 48 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.91E-03 |
| 49 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 2.24E-03 |
| 50 | GO:0006401: RNA catabolic process | 2.24E-03 |
| 51 | GO:0050829: defense response to Gram-negative bacterium | 2.24E-03 |
| 52 | GO:0009617: response to bacterium | 2.44E-03 |
| 53 | GO:0009850: auxin metabolic process | 2.60E-03 |
| 54 | GO:0006102: isocitrate metabolic process | 2.60E-03 |
| 55 | GO:0009642: response to light intensity | 2.60E-03 |
| 56 | GO:0022900: electron transport chain | 2.96E-03 |
| 57 | GO:0007186: G-protein coupled receptor signaling pathway | 2.96E-03 |
| 58 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.96E-03 |
| 59 | GO:0019430: removal of superoxide radicals | 2.96E-03 |
| 60 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.35E-03 |
| 61 | GO:2000280: regulation of root development | 3.76E-03 |
| 62 | GO:0009688: abscisic acid biosynthetic process | 4.18E-03 |
| 63 | GO:0072593: reactive oxygen species metabolic process | 4.61E-03 |
| 64 | GO:0006913: nucleocytoplasmic transport | 4.61E-03 |
| 65 | GO:0006812: cation transport | 4.70E-03 |
| 66 | GO:0071365: cellular response to auxin stimulus | 5.06E-03 |
| 67 | GO:0006820: anion transport | 5.06E-03 |
| 68 | GO:0050832: defense response to fungus | 5.45E-03 |
| 69 | GO:0006108: malate metabolic process | 5.52E-03 |
| 70 | GO:0006094: gluconeogenesis | 5.52E-03 |
| 71 | GO:0006829: zinc II ion transport | 5.52E-03 |
| 72 | GO:0006807: nitrogen compound metabolic process | 5.52E-03 |
| 73 | GO:0048316: seed development | 6.16E-03 |
| 74 | GO:0009651: response to salt stress | 6.91E-03 |
| 75 | GO:0000162: tryptophan biosynthetic process | 7.00E-03 |
| 76 | GO:0009863: salicylic acid mediated signaling pathway | 7.52E-03 |
| 77 | GO:0080092: regulation of pollen tube growth | 9.17E-03 |
| 78 | GO:0071456: cellular response to hypoxia | 9.17E-03 |
| 79 | GO:0030245: cellulose catabolic process | 9.17E-03 |
| 80 | GO:0010017: red or far-red light signaling pathway | 9.17E-03 |
| 81 | GO:0009814: defense response, incompatible interaction | 9.17E-03 |
| 82 | GO:0009058: biosynthetic process | 9.48E-03 |
| 83 | GO:0042744: hydrogen peroxide catabolic process | 1.02E-02 |
| 84 | GO:0006817: phosphate ion transport | 1.03E-02 |
| 85 | GO:0042631: cellular response to water deprivation | 1.16E-02 |
| 86 | GO:0040008: regulation of growth | 1.19E-02 |
| 87 | GO:0048868: pollen tube development | 1.22E-02 |
| 88 | GO:0045489: pectin biosynthetic process | 1.22E-02 |
| 89 | GO:0010154: fruit development | 1.22E-02 |
| 90 | GO:0006885: regulation of pH | 1.22E-02 |
| 91 | GO:0010150: leaf senescence | 1.24E-02 |
| 92 | GO:0009749: response to glucose | 1.35E-02 |
| 93 | GO:0019252: starch biosynthetic process | 1.35E-02 |
| 94 | GO:0009851: auxin biosynthetic process | 1.35E-02 |
| 95 | GO:0010183: pollen tube guidance | 1.35E-02 |
| 96 | GO:0000302: response to reactive oxygen species | 1.41E-02 |
| 97 | GO:0006470: protein dephosphorylation | 1.42E-02 |
| 98 | GO:0009416: response to light stimulus | 1.51E-02 |
| 99 | GO:0009615: response to virus | 1.84E-02 |
| 100 | GO:0009627: systemic acquired resistance | 1.99E-02 |
| 101 | GO:0016049: cell growth | 2.14E-02 |
| 102 | GO:0006811: ion transport | 2.38E-02 |
| 103 | GO:0048527: lateral root development | 2.46E-02 |
| 104 | GO:0009867: jasmonic acid mediated signaling pathway | 2.63E-02 |
| 105 | GO:0045454: cell redox homeostasis | 2.87E-02 |
| 106 | GO:0042542: response to hydrogen peroxide | 3.06E-02 |
| 107 | GO:0009744: response to sucrose | 3.15E-02 |
| 108 | GO:0051707: response to other organism | 3.15E-02 |
| 109 | GO:0009408: response to heat | 3.53E-02 |
| 110 | GO:0031347: regulation of defense response | 3.60E-02 |
| 111 | GO:0071555: cell wall organization | 3.66E-02 |
| 112 | GO:0042742: defense response to bacterium | 3.66E-02 |
| 113 | GO:0009664: plant-type cell wall organization | 3.70E-02 |
| 114 | GO:0009846: pollen germination | 3.70E-02 |
| 115 | GO:0006813: potassium ion transport | 3.89E-02 |
| 116 | GO:0009626: plant-type hypersensitive response | 4.58E-02 |
| 117 | GO:0009620: response to fungus | 4.68E-02 |
| 118 | GO:0042545: cell wall modification | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003796: lysozyme activity | 0.00E+00 |
| 2 | GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity | 0.00E+00 |
| 3 | GO:0005506: iron ion binding | 2.04E-05 |
| 4 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.74E-05 |
| 5 | GO:0020037: heme binding | 9.07E-05 |
| 6 | GO:0048037: cofactor binding | 1.44E-04 |
| 7 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.44E-04 |
| 8 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 1.44E-04 |
| 9 | GO:0004333: fumarate hydratase activity | 1.44E-04 |
| 10 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.44E-04 |
| 11 | GO:0046906: tetrapyrrole binding | 1.44E-04 |
| 12 | GO:0004048: anthranilate phosphoribosyltransferase activity | 1.44E-04 |
| 13 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.78E-04 |
| 14 | GO:0004568: chitinase activity | 2.18E-04 |
| 15 | GO:0019172: glyoxalase III activity | 3.29E-04 |
| 16 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 3.29E-04 |
| 17 | GO:0004618: phosphoglycerate kinase activity | 3.29E-04 |
| 18 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.29E-04 |
| 19 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 3.29E-04 |
| 20 | GO:0004364: glutathione transferase activity | 4.14E-04 |
| 21 | GO:0004970: ionotropic glutamate receptor activity | 4.23E-04 |
| 22 | GO:0005217: intracellular ligand-gated ion channel activity | 4.23E-04 |
| 23 | GO:0031418: L-ascorbic acid binding | 5.23E-04 |
| 24 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 5.40E-04 |
| 25 | GO:0051287: NAD binding | 5.55E-04 |
| 26 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 7.73E-04 |
| 27 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 7.73E-04 |
| 28 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 7.73E-04 |
| 29 | GO:0005199: structural constituent of cell wall | 1.01E-03 |
| 30 | GO:0004031: aldehyde oxidase activity | 1.02E-03 |
| 31 | GO:0050302: indole-3-acetaldehyde oxidase activity | 1.02E-03 |
| 32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.02E-03 |
| 33 | GO:0004930: G-protein coupled receptor activity | 1.02E-03 |
| 34 | GO:0004791: thioredoxin-disulfide reductase activity | 1.09E-03 |
| 35 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.17E-03 |
| 36 | GO:0005496: steroid binding | 1.29E-03 |
| 37 | GO:0019825: oxygen binding | 1.38E-03 |
| 38 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 1.59E-03 |
| 39 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 1.59E-03 |
| 40 | GO:0035252: UDP-xylosyltransferase activity | 1.59E-03 |
| 41 | GO:0004747: ribokinase activity | 1.91E-03 |
| 42 | GO:0008289: lipid binding | 2.36E-03 |
| 43 | GO:0015288: porin activity | 2.60E-03 |
| 44 | GO:0008865: fructokinase activity | 2.60E-03 |
| 45 | GO:0030145: manganese ion binding | 2.67E-03 |
| 46 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.67E-03 |
| 47 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.92E-03 |
| 48 | GO:0008308: voltage-gated anion channel activity | 2.96E-03 |
| 49 | GO:0030955: potassium ion binding | 3.76E-03 |
| 50 | GO:0004743: pyruvate kinase activity | 3.76E-03 |
| 51 | GO:0045309: protein phosphorylated amino acid binding | 3.76E-03 |
| 52 | GO:0004497: monooxygenase activity | 4.45E-03 |
| 53 | GO:0019904: protein domain specific binding | 4.61E-03 |
| 54 | GO:0043565: sequence-specific DNA binding | 5.48E-03 |
| 55 | GO:0005507: copper ion binding | 5.84E-03 |
| 56 | GO:0045735: nutrient reservoir activity | 5.97E-03 |
| 57 | GO:0008131: primary amine oxidase activity | 6.00E-03 |
| 58 | GO:0004722: protein serine/threonine phosphatase activity | 6.29E-03 |
| 59 | GO:0008061: chitin binding | 6.50E-03 |
| 60 | GO:0008134: transcription factor binding | 7.52E-03 |
| 61 | GO:0001046: core promoter sequence-specific DNA binding | 7.52E-03 |
| 62 | GO:0008324: cation transmembrane transporter activity | 8.06E-03 |
| 63 | GO:0008810: cellulase activity | 9.75E-03 |
| 64 | GO:0004252: serine-type endopeptidase activity | 9.99E-03 |
| 65 | GO:0047134: protein-disulfide reductase activity | 1.09E-02 |
| 66 | GO:0005451: monovalent cation:proton antiporter activity | 1.16E-02 |
| 67 | GO:0046873: metal ion transmembrane transporter activity | 1.22E-02 |
| 68 | GO:0001085: RNA polymerase II transcription factor binding | 1.22E-02 |
| 69 | GO:0015299: solute:proton antiporter activity | 1.28E-02 |
| 70 | GO:0010181: FMN binding | 1.28E-02 |
| 71 | GO:0048038: quinone binding | 1.41E-02 |
| 72 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.44E-02 |
| 73 | GO:0004518: nuclease activity | 1.48E-02 |
| 74 | GO:0015385: sodium:proton antiporter activity | 1.55E-02 |
| 75 | GO:0008483: transaminase activity | 1.69E-02 |
| 76 | GO:0008237: metallopeptidase activity | 1.69E-02 |
| 77 | GO:0016597: amino acid binding | 1.76E-02 |
| 78 | GO:0000287: magnesium ion binding | 1.89E-02 |
| 79 | GO:0004601: peroxidase activity | 1.93E-02 |
| 80 | GO:0004721: phosphoprotein phosphatase activity | 2.06E-02 |
| 81 | GO:0050660: flavin adenine dinucleotide binding | 2.23E-02 |
| 82 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.46E-02 |
| 83 | GO:0008422: beta-glucosidase activity | 2.80E-02 |
| 84 | GO:0050661: NADP binding | 2.88E-02 |
| 85 | GO:0005509: calcium ion binding | 3.31E-02 |
| 86 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.33E-02 |
| 87 | GO:0009055: electron carrier activity | 3.78E-02 |
| 88 | GO:0045330: aspartyl esterase activity | 4.18E-02 |
| 89 | GO:0030599: pectinesterase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005618: cell wall | 1.50E-05 |
| 2 | GO:0009506: plasmodesma | 3.42E-05 |
| 3 | GO:0005886: plasma membrane | 1.33E-04 |
| 4 | GO:0045239: tricarboxylic acid cycle enzyme complex | 1.44E-04 |
| 5 | GO:0045252: oxoglutarate dehydrogenase complex | 1.44E-04 |
| 6 | GO:0005774: vacuolar membrane | 2.06E-04 |
| 7 | GO:0017119: Golgi transport complex | 2.18E-04 |
| 8 | GO:0005794: Golgi apparatus | 3.93E-04 |
| 9 | GO:0009530: primary cell wall | 5.40E-04 |
| 10 | GO:0005741: mitochondrial outer membrane | 6.31E-04 |
| 11 | GO:0009505: plant-type cell wall | 9.96E-04 |
| 12 | GO:0005576: extracellular region | 1.22E-03 |
| 13 | GO:0009707: chloroplast outer membrane | 2.31E-03 |
| 14 | GO:0048046: apoplast | 2.61E-03 |
| 15 | GO:0046930: pore complex | 2.96E-03 |
| 16 | GO:0031902: late endosome membrane | 3.46E-03 |
| 17 | GO:0016021: integral component of membrane | 3.52E-03 |
| 18 | GO:0030665: clathrin-coated vesicle membrane | 3.76E-03 |
| 19 | GO:0005783: endoplasmic reticulum | 3.88E-03 |
| 20 | GO:0005740: mitochondrial envelope | 4.18E-03 |
| 21 | GO:0005635: nuclear envelope | 5.40E-03 |
| 22 | GO:0005578: proteinaceous extracellular matrix | 5.52E-03 |
| 23 | GO:0031012: extracellular matrix | 5.52E-03 |
| 24 | GO:0016020: membrane | 6.47E-03 |
| 25 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.50E-03 |
| 26 | GO:0005802: trans-Golgi network | 6.98E-03 |
| 27 | GO:0005768: endosome | 8.49E-03 |
| 28 | GO:0005829: cytosol | 8.94E-03 |
| 29 | GO:0005770: late endosome | 1.22E-02 |
| 30 | GO:0031965: nuclear membrane | 1.35E-02 |
| 31 | GO:0071944: cell periphery | 1.55E-02 |
| 32 | GO:0000139: Golgi membrane | 1.57E-02 |
| 33 | GO:0005773: vacuole | 1.68E-02 |
| 34 | GO:0005667: transcription factor complex | 1.99E-02 |
| 35 | GO:0000325: plant-type vacuole | 2.46E-02 |
| 36 | GO:0000502: proteasome complex | 3.89E-02 |
| 37 | GO:0016607: nuclear speck | 4.48E-02 |
| 38 | GO:0005887: integral component of plasma membrane | 4.77E-02 |