GO Enrichment Analysis of Co-expressed Genes with
AT5G38290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0000476: maturation of 4.5S rRNA | 1.13E-05 |
| 3 | GO:0000967: rRNA 5'-end processing | 1.13E-05 |
| 4 | GO:0042371: vitamin K biosynthetic process | 1.13E-05 |
| 5 | GO:0018026: peptidyl-lysine monomethylation | 3.00E-05 |
| 6 | GO:0034470: ncRNA processing | 3.00E-05 |
| 7 | GO:0006954: inflammatory response | 5.40E-05 |
| 8 | GO:0009102: biotin biosynthetic process | 8.23E-05 |
| 9 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 8.23E-05 |
| 10 | GO:0010236: plastoquinone biosynthetic process | 1.49E-04 |
| 11 | GO:0042793: transcription from plastid promoter | 1.86E-04 |
| 12 | GO:0042372: phylloquinone biosynthetic process | 2.25E-04 |
| 13 | GO:1901259: chloroplast rRNA processing | 2.25E-04 |
| 14 | GO:0009772: photosynthetic electron transport in photosystem II | 2.66E-04 |
| 15 | GO:0000105: histidine biosynthetic process | 3.08E-04 |
| 16 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.39E-04 |
| 17 | GO:0010207: photosystem II assembly | 6.92E-04 |
| 18 | GO:0000162: tryptophan biosynthetic process | 7.99E-04 |
| 19 | GO:0048511: rhythmic process | 9.65E-04 |
| 20 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.02E-03 |
| 21 | GO:0042752: regulation of circadian rhythm | 1.39E-03 |
| 22 | GO:0010027: thylakoid membrane organization | 1.95E-03 |
| 23 | GO:0051707: response to other organism | 3.23E-03 |
| 24 | GO:0031347: regulation of defense response | 3.68E-03 |
| 25 | GO:0006364: rRNA processing | 3.95E-03 |
| 26 | GO:0009658: chloroplast organization | 9.96E-03 |
| 27 | GO:0042254: ribosome biogenesis | 1.01E-02 |
| 28 | GO:0015979: photosynthesis | 1.27E-02 |
| 29 | GO:0016042: lipid catabolic process | 1.50E-02 |
| 30 | GO:0009416: response to light stimulus | 2.29E-02 |
| 31 | GO:0009611: response to wounding | 2.33E-02 |
| 32 | GO:0006412: translation | 2.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 2 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0005528: FK506 binding | 1.39E-05 |
| 5 | GO:0004659: prenyltransferase activity | 1.14E-04 |
| 6 | GO:0016279: protein-lysine N-methyltransferase activity | 1.14E-04 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.77E-04 |
| 8 | GO:0043022: ribosome binding | 3.08E-04 |
| 9 | GO:0003714: transcription corepressor activity | 8.54E-04 |
| 10 | GO:0008536: Ran GTPase binding | 1.33E-03 |
| 11 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.97E-03 |
| 12 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.41E-03 |
| 13 | GO:0019843: rRNA binding | 5.87E-03 |
| 14 | GO:0003723: RNA binding | 7.56E-03 |
| 15 | GO:0016788: hydrolase activity, acting on ester bonds | 1.01E-02 |
| 16 | GO:0003682: chromatin binding | 1.04E-02 |
| 17 | GO:0052689: carboxylic ester hydrolase activity | 1.24E-02 |
| 18 | GO:0016491: oxidoreductase activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.61E-11 |
| 2 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.00E-05 |
| 3 | GO:0042646: plastid nucleoid | 8.23E-05 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 3.70E-04 |
| 5 | GO:0042644: chloroplast nucleoid | 3.97E-04 |
| 6 | GO:0005840: ribosome | 6.12E-04 |
| 7 | GO:0009508: plastid chromosome | 6.40E-04 |
| 8 | GO:0009295: nucleoid | 1.80E-03 |
| 9 | GO:0009579: thylakoid | 2.84E-03 |
| 10 | GO:0009534: chloroplast thylakoid | 2.87E-03 |
| 11 | GO:0031977: thylakoid lumen | 3.06E-03 |
| 12 | GO:0009570: chloroplast stroma | 6.06E-03 |
| 13 | GO:0031969: chloroplast membrane | 1.16E-02 |