co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G36890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071289: cellular response to nickel ion	0.00E+00
2	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
5	GO:0006862: nucleotide transport	0.00E+00
6	GO:0042353: fucose biosynthetic process	0.00E+00
7	GO:0034775: glutathione transmembrane transport	0.00E+00
8	GO:0032497: detection of lipopolysaccharide	0.00E+00
9	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
10	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
11	GO:0010200: response to chitin	1.35E-19
12	GO:0006952: defense response	8.36E-06
13	GO:0006955: immune response	8.43E-06
14	GO:0009695: jasmonic acid biosynthetic process	8.97E-06
15	GO:0051865: protein autoubiquitination	2.50E-05
16	GO:0002679: respiratory burst involved in defense response	4.58E-05
17	GO:0006468: protein phosphorylation	5.51E-05
18	GO:0009611: response to wounding	1.67E-04
19	GO:0006751: glutathione catabolic process	1.82E-04
20	GO:0010337: regulation of salicylic acid metabolic process	1.82E-04
21	GO:0031408: oxylipin biosynthetic process	2.17E-04
22	GO:0009737: response to abscisic acid	2.57E-04
23	GO:0090421: embryonic meristem initiation	3.63E-04
24	GO:0034472: snRNA 3'-end processing	3.63E-04
25	GO:0051180: vitamin transport	3.63E-04
26	GO:0030974: thiamine pyrophosphate transport	3.63E-04
27	GO:0050691: regulation of defense response to virus by host	3.63E-04
28	GO:0006680: glucosylceramide catabolic process	3.63E-04
29	GO:2000070: regulation of response to water deprivation	4.01E-04
30	GO:0048544: recognition of pollen	4.66E-04
31	GO:2000280: regulation of root development	6.94E-04
32	GO:0046939: nucleotide phosphorylation	7.89E-04
33	GO:0031407: oxylipin metabolic process	7.89E-04
34	GO:0042754: negative regulation of circadian rhythm	7.89E-04
35	GO:0010289: homogalacturonan biosynthetic process	7.89E-04
36	GO:0006898: receptor-mediated endocytosis	7.89E-04
37	GO:0015893: drug transport	7.89E-04
38	GO:0052542: defense response by callose deposition	7.89E-04
39	GO:0010507: negative regulation of autophagy	7.89E-04
40	GO:0052544: defense response by callose deposition in cell wall	9.32E-04
41	GO:0009873: ethylene-activated signaling pathway	1.20E-03
42	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	1.28E-03
43	GO:0006598: polyamine catabolic process	1.28E-03
44	GO:0080168: abscisic acid transport	1.28E-03
45	GO:0042344: indole glucosinolate catabolic process	1.28E-03
46	GO:0016045: detection of bacterium	1.28E-03
47	GO:0010359: regulation of anion channel activity	1.28E-03
48	GO:0010253: UDP-rhamnose biosynthetic process	1.28E-03
49	GO:0043207: response to external biotic stimulus	1.84E-03
50	GO:0080170: hydrogen peroxide transmembrane transport	1.84E-03
51	GO:0030100: regulation of endocytosis	1.84E-03
52	GO:0009399: nitrogen fixation	1.84E-03
53	GO:0015700: arsenite transport	1.84E-03
54	GO:0033014: tetrapyrrole biosynthetic process	1.84E-03
55	GO:0015696: ammonium transport	1.84E-03
56	GO:0009863: salicylic acid mediated signaling pathway	1.87E-03
57	GO:0072488: ammonium transmembrane transport	2.47E-03
58	GO:0010107: potassium ion import	2.47E-03
59	GO:0034440: lipid oxidation	2.47E-03
60	GO:1902347: response to strigolactone	2.47E-03
61	GO:0006470: protein dephosphorylation	2.74E-03
62	GO:0009414: response to water deprivation	2.83E-03
63	GO:0006665: sphingolipid metabolic process	3.16E-03
64	GO:0009164: nucleoside catabolic process	3.16E-03
65	GO:0045487: gibberellin catabolic process	3.16E-03
66	GO:2000762: regulation of phenylpropanoid metabolic process	3.16E-03
67	GO:0010256: endomembrane system organization	3.91E-03
68	GO:0047484: regulation of response to osmotic stress	3.91E-03
69	GO:0010193: response to ozone	4.60E-03
70	GO:0009620: response to fungus	4.71E-03
71	GO:0080086: stamen filament development	4.71E-03
72	GO:1901001: negative regulation of response to salt stress	4.71E-03
73	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.71E-03
74	GO:0006970: response to osmotic stress	4.88E-03
75	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.56E-03
76	GO:0006401: RNA catabolic process	5.56E-03
77	GO:0010161: red light signaling pathway	5.56E-03
78	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	5.56E-03
79	GO:1900057: positive regulation of leaf senescence	5.56E-03
80	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.36E-03
81	GO:0007155: cell adhesion	6.46E-03
82	GO:1900150: regulation of defense response to fungus	6.46E-03
83	GO:0045010: actin nucleation	6.46E-03
84	GO:0048658: anther wall tapetum development	6.46E-03
85	GO:0009699: phenylpropanoid biosynthetic process	7.41E-03
86	GO:0009932: cell tip growth	7.41E-03
87	GO:0009880: embryonic pattern specification	7.41E-03
88	GO:0048193: Golgi vesicle transport	7.41E-03
89	GO:0009555: pollen development	7.81E-03
90	GO:0001708: cell fate specification	8.41E-03
91	GO:0098656: anion transmembrane transport	8.41E-03
92	GO:0046685: response to arsenic-containing substance	8.41E-03
93	GO:0006783: heme biosynthetic process	8.41E-03
94	GO:0008219: cell death	8.69E-03
95	GO:0006351: transcription, DNA-templated	8.82E-03
96	GO:0006779: porphyrin-containing compound biosynthetic process	9.46E-03
97	GO:0006811: ion transport	9.60E-03
98	GO:0010192: mucilage biosynthetic process	1.05E-02
99	GO:0006782: protoporphyrinogen IX biosynthetic process	1.05E-02
100	GO:0019538: protein metabolic process	1.05E-02
101	GO:0055062: phosphate ion homeostasis	1.05E-02
102	GO:0048829: root cap development	1.05E-02
103	GO:0009751: response to salicylic acid	1.07E-02
104	GO:0045087: innate immune response	1.10E-02
105	GO:0010015: root morphogenesis	1.17E-02
106	GO:0009682: induced systemic resistance	1.17E-02
107	GO:0018119: peptidyl-cysteine S-nitrosylation	1.17E-02
108	GO:0007166: cell surface receptor signaling pathway	1.26E-02
109	GO:0006839: mitochondrial transport	1.26E-02
110	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.29E-02
111	GO:0009617: response to bacterium	1.33E-02
112	GO:0055046: microgametogenesis	1.41E-02
113	GO:0051707: response to other organism	1.43E-02
114	GO:0048467: gynoecium development	1.53E-02
115	GO:0002237: response to molecule of bacterial origin	1.53E-02
116	GO:0009409: response to cold	1.62E-02
117	GO:0009651: response to salt stress	1.65E-02
118	GO:0009969: xyloglucan biosynthetic process	1.66E-02
119	GO:0080188: RNA-directed DNA methylation	1.66E-02
120	GO:0009901: anther dehiscence	1.66E-02
121	GO:0070588: calcium ion transmembrane transport	1.66E-02
122	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.67E-02
123	GO:0010224: response to UV-B	2.00E-02
124	GO:0016310: phosphorylation	2.03E-02
125	GO:0007017: microtubule-based process	2.07E-02
126	GO:0098542: defense response to other organism	2.22E-02
127	GO:0009269: response to desiccation	2.22E-02
128	GO:0016998: cell wall macromolecule catabolic process	2.22E-02
129	GO:0030433: ubiquitin-dependent ERAD pathway	2.37E-02
130	GO:0009626: plant-type hypersensitive response	2.43E-02
131	GO:0009738: abscisic acid-activated signaling pathway	2.46E-02
132	GO:0009686: gibberellin biosynthetic process	2.52E-02
133	GO:0040007: growth	2.52E-02
134	GO:0042742: defense response to bacterium	2.62E-02
135	GO:0006979: response to oxidative stress	2.66E-02
136	GO:0010089: xylem development	2.67E-02
137	GO:0010214: seed coat development	2.67E-02
138	GO:0048443: stamen development	2.67E-02
139	GO:0019722: calcium-mediated signaling	2.67E-02
140	GO:0006817: phosphate ion transport	2.67E-02
141	GO:0010091: trichome branching	2.67E-02
142	GO:0009624: response to nematode	2.75E-02
143	GO:0035556: intracellular signal transduction	2.79E-02
144	GO:0006355: regulation of transcription, DNA-templated	2.89E-02
145	GO:0009742: brassinosteroid mediated signaling pathway	2.91E-02
146	GO:0010118: stomatal movement	2.99E-02
147	GO:0048653: anther development	2.99E-02
148	GO:0000271: polysaccharide biosynthetic process	2.99E-02
149	GO:0045892: negative regulation of transcription, DNA-templated	3.10E-02
150	GO:0016567: protein ubiquitination	3.15E-02
151	GO:0045489: pectin biosynthetic process	3.16E-02
152	GO:0006814: sodium ion transport	3.32E-02
153	GO:0009749: response to glucose	3.49E-02
154	GO:0009845: seed germination	3.72E-02
155	GO:0010090: trichome morphogenesis	4.02E-02
156	GO:0019760: glucosinolate metabolic process	4.20E-02
157	GO:0009639: response to red or far red light	4.20E-02
158	GO:0009753: response to jasmonic acid	4.29E-02
159	GO:0051607: defense response to virus	4.57E-02
160	GO:0007623: circadian rhythm	4.73E-02
161	GO:0010150: leaf senescence	4.73E-02
162	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.95E-02
163	GO:0010029: regulation of seed germination	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
3	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0016629: 12-oxophytodienoate reductase activity	5.92E-06
6	GO:0003840: gamma-glutamyltransferase activity	2.08E-05
7	GO:0036374: glutathione hydrolase activity	2.08E-05
8	GO:0046423: allene-oxide cyclase activity	2.08E-05
9	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	4.58E-05
10	GO:0016301: kinase activity	1.48E-04
11	GO:0043565: sequence-specific DNA binding	2.25E-04
12	GO:0052894: norspermine:oxygen oxidoreductase activity	3.63E-04
13	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	3.63E-04
14	GO:0090422: thiamine pyrophosphate transporter activity	3.63E-04
15	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	3.63E-04
16	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	3.63E-04
17	GO:0052895: N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity	3.63E-04
18	GO:0090440: abscisic acid transporter activity	3.63E-04
19	GO:0004348: glucosylceramidase activity	3.63E-04
20	GO:0017040: ceramidase activity	7.89E-04
21	GO:0008460: dTDP-glucose 4,6-dehydratase activity	7.89E-04
22	GO:0015105: arsenite transmembrane transporter activity	7.89E-04
23	GO:0052901: spermine:oxygen oxidoreductase (spermidine-forming) activity	7.89E-04
24	GO:0010280: UDP-L-rhamnose synthase activity	7.89E-04
25	GO:0050377: UDP-glucose 4,6-dehydratase activity	7.89E-04
26	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	7.89E-04
27	GO:0004103: choline kinase activity	7.89E-04
28	GO:0008883: glutamyl-tRNA reductase activity	7.89E-04
29	GO:0001047: core promoter binding	7.89E-04
30	GO:0044212: transcription regulatory region DNA binding	9.54E-04
31	GO:0019888: protein phosphatase regulator activity	1.20E-03
32	GO:0046592: polyamine oxidase activity	1.28E-03
33	GO:0004383: guanylate cyclase activity	1.28E-03
34	GO:0016165: linoleate 13S-lipoxygenase activity	1.28E-03
35	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.48E-03
36	GO:0019201: nucleotide kinase activity	1.84E-03
37	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.84E-03
38	GO:0001653: peptide receptor activity	1.84E-03
39	GO:0005432: calcium:sodium antiporter activity	1.84E-03
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.01E-03
41	GO:0004659: prenyltransferase activity	2.47E-03
42	GO:0043015: gamma-tubulin binding	2.47E-03
43	GO:0008514: organic anion transmembrane transporter activity	2.95E-03
44	GO:0004356: glutamate-ammonia ligase activity	3.16E-03
45	GO:0009922: fatty acid elongase activity	3.16E-03
46	GO:0018685: alkane 1-monooxygenase activity	3.16E-03
47	GO:0047631: ADP-ribose diphosphatase activity	3.16E-03
48	GO:0004674: protein serine/threonine kinase activity	3.19E-03
49	GO:0008519: ammonium transmembrane transporter activity	3.91E-03
50	GO:0035673: oligopeptide transmembrane transporter activity	3.91E-03
51	GO:0000210: NAD+ diphosphatase activity	3.91E-03
52	GO:0019137: thioglucosidase activity	3.91E-03
53	GO:0010181: FMN binding	4.00E-03
54	GO:0030246: carbohydrate binding	4.06E-03
55	GO:0051020: GTPase binding	4.71E-03
56	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4.71E-03
57	GO:0004017: adenylate kinase activity	4.71E-03
58	GO:0019900: kinase binding	4.71E-03
59	GO:0004143: diacylglycerol kinase activity	5.56E-03
60	GO:0016621: cinnamoyl-CoA reductase activity	5.56E-03
61	GO:0008143: poly(A) binding	5.56E-03
62	GO:0015491: cation:cation antiporter activity	6.46E-03
63	GO:0003951: NAD+ kinase activity	7.41E-03
64	GO:0004721: phosphoprotein phosphatase activity	7.84E-03
65	GO:0003700: transcription factor activity, sequence-specific DNA binding	7.90E-03
66	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	7.95E-03
67	GO:0003678: DNA helicase activity	8.41E-03
68	GO:0004722: protein serine/threonine phosphatase activity	9.14E-03
69	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	9.36E-03
70	GO:0015297: antiporter activity	1.00E-02
71	GO:0004713: protein tyrosine kinase activity	1.05E-02
72	GO:0009055: electron carrier activity	1.22E-02
73	GO:0015198: oligopeptide transporter activity	1.29E-02
74	GO:0005262: calcium channel activity	1.41E-02
75	GO:0000175: 3'-5'-exoribonuclease activity	1.41E-02
76	GO:0005315: inorganic phosphate transmembrane transporter activity	1.41E-02
77	GO:0008131: primary amine oxidase activity	1.53E-02
78	GO:0005524: ATP binding	1.70E-02
79	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.80E-02
80	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.80E-02
81	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.80E-02
82	GO:0004672: protein kinase activity	1.89E-02
83	GO:0051087: chaperone binding	2.07E-02
84	GO:0031625: ubiquitin protein ligase binding	2.14E-02
85	GO:0050660: flavin adenine dinucleotide binding	2.22E-02
86	GO:0004540: ribonuclease activity	2.22E-02
87	GO:0004707: MAP kinase activity	2.22E-02
88	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.37E-02
89	GO:0003779: actin binding	2.67E-02
90	GO:0050662: coenzyme binding	3.32E-02
91	GO:0051015: actin filament binding	4.02E-02
92	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.39E-02
93	GO:0005200: structural constituent of cytoskeleton	4.39E-02
94	GO:0004842: ubiquitin-protein transferase activity	4.47E-02
95	GO:0005516: calmodulin binding	4.67E-02
96	GO:0015250: water channel activity	4.76E-02
97	GO:0046872: metal ion binding	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0005911: cell-cell junction	3.63E-04
3	GO:0000159: protein phosphatase type 2A complex	9.32E-04
4	GO:0016021: integral component of membrane	1.14E-03
5	GO:0005886: plasma membrane	1.25E-03
6	GO:0000178: exosome (RNase complex)	3.16E-03
7	GO:0030173: integral component of Golgi membrane	4.71E-03
8	GO:0010494: cytoplasmic stress granule	8.41E-03
9	GO:0045298: tubulin complex	8.41E-03
10	GO:0015030: Cajal body	9.46E-03
11	GO:0016604: nuclear body	9.46E-03
12	GO:0005743: mitochondrial inner membrane	9.79E-03
13	GO:0090404: pollen tube tip	1.17E-02
14	GO:0031902: late endosome membrane	1.31E-02
15	GO:0005768: endosome	2.19E-02
16	GO:0010008: endosome membrane	2.36E-02
17	GO:0030136: clathrin-coated vesicle	2.83E-02
18	GO:0005777: peroxisome	3.16E-02
19	GO:0005770: late endosome	3.16E-02
20	GO:0032580: Golgi cisterna membrane	4.20E-02
21	GO:0005778: peroxisomal membrane	4.39E-02
22	GO:0000932: P-body	4.76E-02
23	GO:0009506: plasmodesma	4.81E-02
24	GO:0031225: anchored component of membrane	4.91E-02