co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G35735

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:2001143: N-methylnicotinate transport	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:2001142: nicotinate transport	0.00E+00
5	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
6	GO:0006005: L-fucose biosynthetic process	0.00E+00
7	GO:0006468: protein phosphorylation	4.23E-06
8	GO:0009699: phenylpropanoid biosynthetic process	1.02E-04
9	GO:0080157: regulation of plant-type cell wall organization or biogenesis	1.25E-04
10	GO:0099636: cytoplasmic streaming	1.25E-04
11	GO:0032491: detection of molecule of fungal origin	1.25E-04
12	GO:0042350: GDP-L-fucose biosynthetic process	1.25E-04
13	GO:0051014: actin filament severing	1.25E-04
14	GO:0071277: cellular response to calcium ion	1.25E-04
15	GO:0018920: glyphosate metabolic process	1.25E-04
16	GO:0007166: cell surface receptor signaling pathway	2.67E-04
17	GO:0046939: nucleotide phosphorylation	2.90E-04
18	GO:0010155: regulation of proton transport	2.90E-04
19	GO:0009805: coumarin biosynthetic process	2.90E-04
20	GO:0010372: positive regulation of gibberellin biosynthetic process	2.90E-04
21	GO:0009225: nucleotide-sugar metabolic process	3.52E-04
22	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	4.78E-04
23	GO:0010366: negative regulation of ethylene biosynthetic process	4.78E-04
24	GO:0010447: response to acidic pH	4.78E-04
25	GO:0070475: rRNA base methylation	4.78E-04
26	GO:0071323: cellular response to chitin	6.85E-04
27	GO:0030100: regulation of endocytosis	6.85E-04
28	GO:0002679: respiratory burst involved in defense response	6.85E-04
29	GO:0051131: chaperone-mediated protein complex assembly	6.85E-04
30	GO:1902347: response to strigolactone	9.08E-04
31	GO:0045227: capsule polysaccharide biosynthetic process	9.08E-04
32	GO:0033320: UDP-D-xylose biosynthetic process	9.08E-04
33	GO:0051764: actin crosslink formation	9.08E-04
34	GO:0033358: UDP-L-arabinose biosynthetic process	9.08E-04
35	GO:0071219: cellular response to molecule of bacterial origin	9.08E-04
36	GO:0048544: recognition of pollen	9.12E-04
37	GO:0009164: nucleoside catabolic process	1.15E-03
38	GO:0043484: regulation of RNA splicing	1.15E-03
39	GO:0030041: actin filament polymerization	1.15E-03
40	GO:0010337: regulation of salicylic acid metabolic process	1.41E-03
41	GO:0016070: RNA metabolic process	1.41E-03
42	GO:0000470: maturation of LSU-rRNA	1.41E-03
43	GO:0042732: D-xylose metabolic process	1.41E-03
44	GO:0048317: seed morphogenesis	1.41E-03
45	GO:0006796: phosphate-containing compound metabolic process	1.41E-03
46	GO:0009423: chorismate biosynthetic process	1.68E-03
47	GO:0042742: defense response to bacterium	1.84E-03
48	GO:0008219: cell death	1.93E-03
49	GO:0010044: response to aluminum ion	1.98E-03
50	GO:0006955: immune response	1.98E-03
51	GO:0006744: ubiquinone biosynthetic process	1.98E-03
52	GO:0051693: actin filament capping	1.98E-03
53	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.98E-03
54	GO:0009813: flavonoid biosynthetic process	2.02E-03
55	GO:0043068: positive regulation of programmed cell death	2.29E-03
56	GO:0006605: protein targeting	2.29E-03
57	GO:0045010: actin nucleation	2.29E-03
58	GO:0048658: anther wall tapetum development	2.29E-03
59	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.29E-03
60	GO:1900150: regulation of defense response to fungus	2.29E-03
61	GO:0006402: mRNA catabolic process	2.29E-03
62	GO:0045087: innate immune response	2.43E-03
63	GO:0009808: lignin metabolic process	2.61E-03
64	GO:0051865: protein autoubiquitination	2.95E-03
65	GO:0008202: steroid metabolic process	3.31E-03
66	GO:0030042: actin filament depolymerization	3.31E-03
67	GO:0080167: response to karrikin	3.51E-03
68	GO:0010200: response to chitin	3.66E-03
69	GO:0006032: chitin catabolic process	3.68E-03
70	GO:0019538: protein metabolic process	3.68E-03
71	GO:0010015: root morphogenesis	4.06E-03
72	GO:0009698: phenylpropanoid metabolic process	4.06E-03
73	GO:0009073: aromatic amino acid family biosynthetic process	4.06E-03
74	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.45E-03
75	GO:0055046: microgametogenesis	4.86E-03
76	GO:0007015: actin filament organization	5.28E-03
77	GO:0034605: cellular response to heat	5.28E-03
78	GO:0090351: seedling development	5.71E-03
79	GO:0070588: calcium ion transmembrane transport	5.71E-03
80	GO:0009742: brassinosteroid mediated signaling pathway	6.32E-03
81	GO:0051017: actin filament bundle assembly	6.61E-03
82	GO:0006487: protein N-linked glycosylation	6.61E-03
83	GO:0009863: salicylic acid mediated signaling pathway	6.61E-03
84	GO:0007010: cytoskeleton organization	6.61E-03
85	GO:0080147: root hair cell development	6.61E-03
86	GO:0043622: cortical microtubule organization	7.08E-03
87	GO:0003333: amino acid transmembrane transport	7.56E-03
88	GO:0016998: cell wall macromolecule catabolic process	7.56E-03
89	GO:0009845: seed germination	8.07E-03
90	GO:0040007: growth	8.56E-03
91	GO:0006012: galactose metabolic process	8.56E-03
92	GO:0071215: cellular response to abscisic acid stimulus	8.56E-03
93	GO:0009686: gibberellin biosynthetic process	8.56E-03
94	GO:0009306: protein secretion	9.07E-03
95	GO:0006817: phosphate ion transport	9.07E-03
96	GO:0000271: polysaccharide biosynthetic process	1.01E-02
97	GO:0010501: RNA secondary structure unwinding	1.01E-02
98	GO:0006606: protein import into nucleus	1.01E-02
99	GO:0042631: cellular response to water deprivation	1.01E-02
100	GO:0048868: pollen tube development	1.07E-02
101	GO:0009960: endosperm development	1.07E-02
102	GO:0045489: pectin biosynthetic process	1.07E-02
103	GO:0006891: intra-Golgi vesicle-mediated transport	1.24E-02
104	GO:0002229: defense response to oomycetes	1.24E-02
105	GO:0032502: developmental process	1.30E-02
106	GO:0031047: gene silencing by RNA	1.30E-02
107	GO:1901657: glycosyl compound metabolic process	1.36E-02
108	GO:0010090: trichome morphogenesis	1.36E-02
109	GO:0046686: response to cadmium ion	1.46E-02
110	GO:0006904: vesicle docking involved in exocytosis	1.48E-02
111	GO:0009615: response to virus	1.61E-02
112	GO:0001666: response to hypoxia	1.61E-02
113	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.67E-02
114	GO:0048573: photoperiodism, flowering	1.81E-02
115	GO:0016049: cell growth	1.87E-02
116	GO:0009817: defense response to fungus, incompatible interaction	1.94E-02
117	GO:0048767: root hair elongation	2.01E-02
118	GO:0010311: lateral root formation	2.01E-02
119	GO:0006865: amino acid transport	2.23E-02
120	GO:0016051: carbohydrate biosynthetic process	2.30E-02
121	GO:0006886: intracellular protein transport	2.45E-02
122	GO:0006839: mitochondrial transport	2.52E-02
123	GO:0006887: exocytosis	2.60E-02
124	GO:0006897: endocytosis	2.60E-02
125	GO:0008283: cell proliferation	2.75E-02
126	GO:0016310: phosphorylation	2.87E-02
127	GO:0009408: response to heat	2.93E-02
128	GO:0009965: leaf morphogenesis	2.99E-02
129	GO:0006397: mRNA processing	3.06E-02
130	GO:0009809: lignin biosynthetic process	3.40E-02
131	GO:0006364: rRNA processing	3.40E-02
132	GO:0006857: oligopeptide transport	3.57E-02
133	GO:0043086: negative regulation of catalytic activity	3.83E-02
134	GO:0009626: plant-type hypersensitive response	4.01E-02
135	GO:0009620: response to fungus	4.10E-02
136	GO:0016569: covalent chromatin modification	4.19E-02
137	GO:0006396: RNA processing	4.47E-02
138	GO:0006810: transport	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0090416: nicotinate transporter activity	0.00E+00
5	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
6	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
7	GO:0046409: p-coumarate 3-hydroxylase activity	0.00E+00
8	GO:0005524: ATP binding	4.71E-06
9	GO:0004674: protein serine/threonine kinase activity	1.65E-05
10	GO:0047631: ADP-ribose diphosphatase activity	2.18E-05
11	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	1.25E-04
12	GO:0017151: DEAD/H-box RNA helicase binding	1.25E-04
13	GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity	1.25E-04
14	GO:0050577: GDP-L-fucose synthase activity	1.25E-04
15	GO:0015085: calcium ion transmembrane transporter activity	1.25E-04
16	GO:0016301: kinase activity	1.49E-04
17	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	6.85E-04
18	GO:0019201: nucleotide kinase activity	6.85E-04
19	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	6.85E-04
20	GO:0050373: UDP-arabinose 4-epimerase activity	9.08E-04
21	GO:0019199: transmembrane receptor protein kinase activity	9.08E-04
22	GO:0004672: protein kinase activity	9.39E-04
23	GO:0002020: protease binding	1.15E-03
24	GO:0045431: flavonol synthase activity	1.15E-03
25	GO:0016462: pyrophosphatase activity	1.41E-03
26	GO:0048040: UDP-glucuronate decarboxylase activity	1.41E-03
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.41E-03
28	GO:0035673: oligopeptide transmembrane transporter activity	1.41E-03
29	GO:0000210: NAD+ diphosphatase activity	1.41E-03
30	GO:0004656: procollagen-proline 4-dioxygenase activity	1.68E-03
31	GO:0070403: NAD+ binding	1.68E-03
32	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.68E-03
33	GO:0003978: UDP-glucose 4-epimerase activity	1.68E-03
34	GO:0004017: adenylate kinase activity	1.68E-03
35	GO:0008143: poly(A) binding	1.98E-03
36	GO:0004143: diacylglycerol kinase activity	1.98E-03
37	GO:0004427: inorganic diphosphatase activity	1.98E-03
38	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.22E-03
39	GO:0004525: ribonuclease III activity	2.29E-03
40	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.29E-03
41	GO:0003951: NAD+ kinase activity	2.61E-03
42	GO:0008142: oxysterol binding	2.61E-03
43	GO:0004568: chitinase activity	3.68E-03
44	GO:0015198: oligopeptide transporter activity	4.45E-03
45	GO:0008139: nuclear localization sequence binding	4.86E-03
46	GO:0005388: calcium-transporting ATPase activity	4.86E-03
47	GO:0008061: chitin binding	5.71E-03
48	GO:0003779: actin binding	5.78E-03
49	GO:0031418: L-ascorbic acid binding	6.61E-03
50	GO:0033612: receptor serine/threonine kinase binding	7.56E-03
51	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.05E-03
52	GO:0022891: substrate-specific transmembrane transporter activity	8.56E-03
53	GO:0008565: protein transporter activity	8.93E-03
54	GO:0008536: Ran GTPase binding	1.07E-02
55	GO:0016853: isomerase activity	1.12E-02
56	GO:0050662: coenzyme binding	1.12E-02
57	GO:0004197: cysteine-type endopeptidase activity	1.30E-02
58	GO:0004518: nuclease activity	1.30E-02
59	GO:0042802: identical protein binding	1.31E-02
60	GO:0051015: actin filament binding	1.36E-02
61	GO:0008375: acetylglucosaminyltransferase activity	1.74E-02
62	GO:0102483: scopolin beta-glucosidase activity	1.81E-02
63	GO:0030247: polysaccharide binding	1.81E-02
64	GO:0004004: ATP-dependent RNA helicase activity	1.81E-02
65	GO:0050660: flavin adenine dinucleotide binding	1.85E-02
66	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.94E-02
67	GO:0005516: calmodulin binding	2.00E-02
68	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.30E-02
69	GO:0008422: beta-glucosidase activity	2.45E-02
70	GO:0005506: iron ion binding	2.84E-02
71	GO:0035091: phosphatidylinositol binding	2.91E-02
72	GO:0009055: electron carrier activity	3.14E-02
73	GO:0015171: amino acid transmembrane transporter activity	3.66E-02
74	GO:0022857: transmembrane transporter activity	4.19E-02
75	GO:0051082: unfolded protein binding	4.37E-02
76	GO:0008026: ATP-dependent helicase activity	4.56E-02
77	GO:0003729: mRNA binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.86E-08
2	GO:0010494: cytoplasmic stress granule	1.25E-04
3	GO:0016442: RISC complex	1.25E-04
4	GO:0016021: integral component of membrane	5.89E-04
5	GO:0032580: Golgi cisterna membrane	1.25E-03
6	GO:0016363: nuclear matrix	1.68E-03
7	GO:0048471: perinuclear region of cytoplasm	4.06E-03
8	GO:0005884: actin filament	4.06E-03
9	GO:0090404: pollen tube tip	4.06E-03
10	GO:0010008: endosome membrane	5.11E-03
11	GO:0005795: Golgi stack	5.71E-03
12	GO:0043234: protein complex	6.15E-03
13	GO:0005768: endosome	6.39E-03
14	GO:0005794: Golgi apparatus	9.17E-03
15	GO:0031965: nuclear membrane	1.18E-02
16	GO:0000145: exocyst	1.30E-02
17	GO:0005789: endoplasmic reticulum membrane	1.42E-02
18	GO:0000932: P-body	1.61E-02
19	GO:0005788: endoplasmic reticulum lumen	1.67E-02
20	GO:0019005: SCF ubiquitin ligase complex	1.94E-02
21	GO:0005783: endoplasmic reticulum	1.97E-02
22	GO:0090406: pollen tube	2.75E-02
23	GO:0005856: cytoskeleton	2.99E-02
24	GO:0016020: membrane	3.13E-02
25	GO:0031966: mitochondrial membrane	3.24E-02
26	GO:0005635: nuclear envelope	3.57E-02
27	GO:0005887: integral component of plasma membrane	3.97E-02
28	GO:0000139: Golgi membrane	4.22E-02