GO Enrichment Analysis of Co-expressed Genes with
AT5G35580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006983: ER overload response | 0.00E+00 |
| 2 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 3 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 4 | GO:0010055: atrichoblast differentiation | 0.00E+00 |
| 5 | GO:0006858: extracellular transport | 0.00E+00 |
| 6 | GO:0043620: regulation of DNA-templated transcription in response to stress | 0.00E+00 |
| 7 | GO:0006099: tricarboxylic acid cycle | 1.32E-06 |
| 8 | GO:0006106: fumarate metabolic process | 5.34E-05 |
| 9 | GO:0032107: regulation of response to nutrient levels | 5.34E-05 |
| 10 | GO:0010365: positive regulation of ethylene biosynthetic process | 5.34E-05 |
| 11 | GO:0046686: response to cadmium ion | 8.66E-05 |
| 12 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.30E-04 |
| 13 | GO:0042325: regulation of phosphorylation | 1.30E-04 |
| 14 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.30E-04 |
| 15 | GO:0043066: negative regulation of apoptotic process | 1.30E-04 |
| 16 | GO:0006874: cellular calcium ion homeostasis | 1.51E-04 |
| 17 | GO:0001676: long-chain fatty acid metabolic process | 3.25E-04 |
| 18 | GO:0009413: response to flooding | 3.25E-04 |
| 19 | GO:0006564: L-serine biosynthetic process | 5.52E-04 |
| 20 | GO:0016973: poly(A)+ mRNA export from nucleus | 5.52E-04 |
| 21 | GO:0009228: thiamine biosynthetic process | 6.76E-04 |
| 22 | GO:0009423: chorismate biosynthetic process | 8.05E-04 |
| 23 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 9.40E-04 |
| 24 | GO:0006401: RNA catabolic process | 9.40E-04 |
| 25 | GO:0050829: defense response to Gram-negative bacterium | 9.40E-04 |
| 26 | GO:0009850: auxin metabolic process | 1.08E-03 |
| 27 | GO:0006102: isocitrate metabolic process | 1.08E-03 |
| 28 | GO:0022900: electron transport chain | 1.23E-03 |
| 29 | GO:0007186: G-protein coupled receptor signaling pathway | 1.23E-03 |
| 30 | GO:0006979: response to oxidative stress | 1.32E-03 |
| 31 | GO:0010112: regulation of systemic acquired resistance | 1.38E-03 |
| 32 | GO:0006754: ATP biosynthetic process | 1.38E-03 |
| 33 | GO:0006098: pentose-phosphate shunt | 1.38E-03 |
| 34 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.38E-03 |
| 35 | GO:0043069: negative regulation of programmed cell death | 1.71E-03 |
| 36 | GO:0000038: very long-chain fatty acid metabolic process | 1.88E-03 |
| 37 | GO:0009073: aromatic amino acid family biosynthetic process | 1.88E-03 |
| 38 | GO:0006108: malate metabolic process | 2.25E-03 |
| 39 | GO:0006807: nitrogen compound metabolic process | 2.25E-03 |
| 40 | GO:0009058: biosynthetic process | 2.54E-03 |
| 41 | GO:0016998: cell wall macromolecule catabolic process | 3.46E-03 |
| 42 | GO:0080092: regulation of pollen tube growth | 3.68E-03 |
| 43 | GO:0030245: cellulose catabolic process | 3.68E-03 |
| 44 | GO:0008284: positive regulation of cell proliferation | 4.36E-03 |
| 45 | GO:0010501: RNA secondary structure unwinding | 4.60E-03 |
| 46 | GO:0015991: ATP hydrolysis coupled proton transport | 4.60E-03 |
| 47 | GO:0048868: pollen tube development | 4.84E-03 |
| 48 | GO:0006520: cellular amino acid metabolic process | 4.84E-03 |
| 49 | GO:0010183: pollen tube guidance | 5.34E-03 |
| 50 | GO:0010193: response to ozone | 5.60E-03 |
| 51 | GO:0006904: vesicle docking involved in exocytosis | 6.66E-03 |
| 52 | GO:0051607: defense response to virus | 6.94E-03 |
| 53 | GO:0016579: protein deubiquitination | 6.94E-03 |
| 54 | GO:0009817: defense response to fungus, incompatible interaction | 8.68E-03 |
| 55 | GO:0048767: root hair elongation | 8.99E-03 |
| 56 | GO:0009407: toxin catabolic process | 9.30E-03 |
| 57 | GO:0048527: lateral root development | 9.61E-03 |
| 58 | GO:0006887: exocytosis | 1.16E-02 |
| 59 | GO:0006897: endocytosis | 1.16E-02 |
| 60 | GO:0006631: fatty acid metabolic process | 1.16E-02 |
| 61 | GO:0051707: response to other organism | 1.23E-02 |
| 62 | GO:0008643: carbohydrate transport | 1.30E-02 |
| 63 | GO:0009636: response to toxic substance | 1.33E-02 |
| 64 | GO:0009809: lignin biosynthetic process | 1.51E-02 |
| 65 | GO:0009416: response to light stimulus | 1.66E-02 |
| 66 | GO:0006096: glycolytic process | 1.70E-02 |
| 67 | GO:0009620: response to fungus | 1.82E-02 |
| 68 | GO:0042545: cell wall modification | 1.90E-02 |
| 69 | GO:0040008: regulation of growth | 2.77E-02 |
| 70 | GO:0006508: proteolysis | 2.81E-02 |
| 71 | GO:0010150: leaf senescence | 2.87E-02 |
| 72 | GO:0045490: pectin catabolic process | 2.87E-02 |
| 73 | GO:0009617: response to bacterium | 3.25E-02 |
| 74 | GO:0009860: pollen tube growth | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003856: 3-dehydroquinate synthase activity | 0.00E+00 |
| 2 | GO:0008186: RNA-dependent ATPase activity | 0.00E+00 |
| 3 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 5.34E-05 |
| 4 | GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H | 5.34E-05 |
| 5 | GO:0004333: fumarate hydratase activity | 5.34E-05 |
| 6 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 5.34E-05 |
| 7 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 5.34E-05 |
| 8 | GO:0048037: cofactor binding | 5.34E-05 |
| 9 | GO:0000287: magnesium ion binding | 5.86E-05 |
| 10 | GO:0004970: ionotropic glutamate receptor activity | 1.07E-04 |
| 11 | GO:0005217: intracellular ligand-gated ion channel activity | 1.07E-04 |
| 12 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.30E-04 |
| 13 | GO:0004817: cysteine-tRNA ligase activity | 1.30E-04 |
| 14 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.30E-04 |
| 15 | GO:0019172: glyoxalase III activity | 1.30E-04 |
| 16 | GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity | 2.22E-04 |
| 17 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 3.25E-04 |
| 18 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.25E-04 |
| 19 | GO:0004930: G-protein coupled receptor activity | 4.35E-04 |
| 20 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 6.76E-04 |
| 21 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 6.76E-04 |
| 22 | GO:0102391: decanoate--CoA ligase activity | 8.05E-04 |
| 23 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.40E-04 |
| 24 | GO:0003724: RNA helicase activity | 1.23E-03 |
| 25 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.38E-03 |
| 26 | GO:0030955: potassium ion binding | 1.54E-03 |
| 27 | GO:0004743: pyruvate kinase activity | 1.54E-03 |
| 28 | GO:0019888: protein phosphatase regulator activity | 2.25E-03 |
| 29 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.25E-03 |
| 30 | GO:0008083: growth factor activity | 2.43E-03 |
| 31 | GO:0030170: pyridoxal phosphate binding | 2.67E-03 |
| 32 | GO:0001046: core promoter sequence-specific DNA binding | 3.03E-03 |
| 33 | GO:0008810: cellulase activity | 3.90E-03 |
| 34 | GO:0008514: organic anion transmembrane transporter activity | 4.13E-03 |
| 35 | GO:0047134: protein-disulfide reductase activity | 4.36E-03 |
| 36 | GO:0008536: Ran GTPase binding | 4.84E-03 |
| 37 | GO:0004791: thioredoxin-disulfide reductase activity | 5.09E-03 |
| 38 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.60E-03 |
| 39 | GO:0004518: nuclease activity | 5.86E-03 |
| 40 | GO:0008483: transaminase activity | 6.66E-03 |
| 41 | GO:0008237: metallopeptidase activity | 6.66E-03 |
| 42 | GO:0004004: ATP-dependent RNA helicase activity | 8.09E-03 |
| 43 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.09E-02 |
| 44 | GO:0004364: glutathione transferase activity | 1.19E-02 |
| 45 | GO:0051287: NAD binding | 1.40E-02 |
| 46 | GO:0016887: ATPase activity | 1.45E-02 |
| 47 | GO:0045330: aspartyl esterase activity | 1.63E-02 |
| 48 | GO:0030599: pectinesterase activity | 1.86E-02 |
| 49 | GO:0015035: protein disulfide oxidoreductase activity | 1.98E-02 |
| 50 | GO:0016746: transferase activity, transferring acyl groups | 1.98E-02 |
| 51 | GO:0008026: ATP-dependent helicase activity | 2.02E-02 |
| 52 | GO:0005524: ATP binding | 2.17E-02 |
| 53 | GO:0030246: carbohydrate binding | 2.23E-02 |
| 54 | GO:0005507: copper ion binding | 2.36E-02 |
| 55 | GO:0004252: serine-type endopeptidase activity | 2.46E-02 |
| 56 | GO:0046910: pectinesterase inhibitor activity | 2.73E-02 |
| 57 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.40E-02 |
| 58 | GO:0016788: hydrolase activity, acting on ester bonds | 3.96E-02 |
| 59 | GO:0005515: protein binding | 4.27E-02 |
| 60 | GO:0052689: carboxylic ester hydrolase activity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045239: tricarboxylic acid cycle enzyme complex | 5.34E-05 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 5.34E-05 |
| 3 | GO:0070062: extracellular exosome | 3.25E-04 |
| 4 | GO:0005886: plasma membrane | 6.32E-04 |
| 5 | GO:0005635: nuclear envelope | 1.46E-03 |
| 6 | GO:0031307: integral component of mitochondrial outer membrane | 2.06E-03 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.41E-03 |
| 8 | GO:0005741: mitochondrial outer membrane | 3.46E-03 |
| 9 | GO:0005829: cytosol | 3.61E-03 |
| 10 | GO:0005794: Golgi apparatus | 4.30E-03 |
| 11 | GO:0005802: trans-Golgi network | 5.05E-03 |
| 12 | GO:0000145: exocyst | 5.86E-03 |
| 13 | GO:0005768: endosome | 5.95E-03 |
| 14 | GO:0071944: cell periphery | 6.12E-03 |
| 15 | GO:0005774: vacuolar membrane | 8.56E-03 |
| 16 | GO:0009505: plant-type cell wall | 9.06E-03 |
| 17 | GO:0005618: cell wall | 1.05E-02 |
| 18 | GO:0031902: late endosome membrane | 1.16E-02 |
| 19 | GO:0005737: cytoplasm | 1.64E-02 |
| 20 | GO:0009506: plasmodesma | 2.17E-02 |
| 21 | GO:0005615: extracellular space | 3.11E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 3.50E-02 |
| 23 | GO:0009536: plastid | 4.11E-02 |