GO Enrichment Analysis of Co-expressed Genes with
AT5G35220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009249: protein lipoylation | 0.00E+00 |
| 2 | GO:0015871: choline transport | 0.00E+00 |
| 3 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 4 | GO:0071461: cellular response to redox state | 4.04E-05 |
| 5 | GO:0080005: photosystem stoichiometry adjustment | 1.00E-04 |
| 6 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.00E-04 |
| 7 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.00E-04 |
| 8 | GO:0048255: mRNA stabilization | 1.00E-04 |
| 9 | GO:0090603: sieve element differentiation | 1.00E-04 |
| 10 | GO:0009150: purine ribonucleotide metabolic process | 1.73E-04 |
| 11 | GO:0006696: ergosterol biosynthetic process | 1.73E-04 |
| 12 | GO:0045910: negative regulation of DNA recombination | 1.73E-04 |
| 13 | GO:0009663: plasmodesma organization | 1.73E-04 |
| 14 | GO:0009647: skotomorphogenesis | 2.55E-04 |
| 15 | GO:0033014: tetrapyrrole biosynthetic process | 2.55E-04 |
| 16 | GO:2001141: regulation of RNA biosynthetic process | 2.55E-04 |
| 17 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.55E-04 |
| 18 | GO:0009963: positive regulation of flavonoid biosynthetic process | 2.55E-04 |
| 19 | GO:0010088: phloem development | 2.55E-04 |
| 20 | GO:0009649: entrainment of circadian clock | 3.43E-04 |
| 21 | GO:0046283: anthocyanin-containing compound metabolic process | 4.37E-04 |
| 22 | GO:0009107: lipoate biosynthetic process | 4.37E-04 |
| 23 | GO:0010190: cytochrome b6f complex assembly | 5.37E-04 |
| 24 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.37E-04 |
| 25 | GO:0009704: de-etiolation | 8.61E-04 |
| 26 | GO:0009231: riboflavin biosynthetic process | 8.61E-04 |
| 27 | GO:0048564: photosystem I assembly | 8.61E-04 |
| 28 | GO:0019430: removal of superoxide radicals | 9.77E-04 |
| 29 | GO:0032544: plastid translation | 9.77E-04 |
| 30 | GO:0071482: cellular response to light stimulus | 9.77E-04 |
| 31 | GO:0022900: electron transport chain | 9.77E-04 |
| 32 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.10E-03 |
| 33 | GO:0006783: heme biosynthetic process | 1.10E-03 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.22E-03 |
| 35 | GO:0009098: leucine biosynthetic process | 1.22E-03 |
| 36 | GO:0045036: protein targeting to chloroplast | 1.35E-03 |
| 37 | GO:0009641: shade avoidance | 1.35E-03 |
| 38 | GO:0006298: mismatch repair | 1.35E-03 |
| 39 | GO:0006352: DNA-templated transcription, initiation | 1.49E-03 |
| 40 | GO:0006790: sulfur compound metabolic process | 1.63E-03 |
| 41 | GO:0010207: photosystem II assembly | 1.92E-03 |
| 42 | GO:0016226: iron-sulfur cluster assembly | 2.89E-03 |
| 43 | GO:0016117: carotenoid biosynthetic process | 3.42E-03 |
| 44 | GO:0009658: chloroplast organization | 3.57E-03 |
| 45 | GO:0010051: xylem and phloem pattern formation | 3.61E-03 |
| 46 | GO:0009791: post-embryonic development | 4.19E-03 |
| 47 | GO:0019761: glucosinolate biosynthetic process | 4.58E-03 |
| 48 | GO:0030163: protein catabolic process | 4.79E-03 |
| 49 | GO:0016126: sterol biosynthetic process | 5.64E-03 |
| 50 | GO:0009816: defense response to bacterium, incompatible interaction | 5.86E-03 |
| 51 | GO:0048573: photoperiodism, flowering | 6.31E-03 |
| 52 | GO:0010119: regulation of stomatal movement | 7.49E-03 |
| 53 | GO:0009640: photomorphogenesis | 9.53E-03 |
| 54 | GO:0009585: red, far-red light phototransduction | 1.18E-02 |
| 55 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.20E-02 |
| 56 | GO:0010224: response to UV-B | 1.20E-02 |
| 57 | GO:0006417: regulation of translation | 1.26E-02 |
| 58 | GO:0006457: protein folding | 1.50E-02 |
| 59 | GO:0006508: proteolysis | 1.79E-02 |
| 60 | GO:0009451: RNA modification | 2.26E-02 |
| 61 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.30E-02 |
| 62 | GO:0006810: transport | 3.45E-02 |
| 63 | GO:0046686: response to cadmium ion | 3.65E-02 |
| 64 | GO:0009408: response to heat | 4.67E-02 |
| 65 | GO:0006281: DNA repair | 4.67E-02 |
| 66 | GO:0055114: oxidation-reduction process | 4.75E-02 |
| 67 | GO:0048364: root development | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 2 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 3 | GO:0050486: intramolecular transferase activity, transferring hydroxy groups | 0.00E+00 |
| 4 | GO:0015220: choline transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 6 | GO:0030941: chloroplast targeting sequence binding | 4.04E-05 |
| 7 | GO:0004325: ferrochelatase activity | 4.04E-05 |
| 8 | GO:0051996: squalene synthase activity | 4.04E-05 |
| 9 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.00E-04 |
| 10 | GO:0017118: lipoyltransferase activity | 1.00E-04 |
| 11 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 1.00E-04 |
| 12 | GO:0016415: octanoyltransferase activity | 1.00E-04 |
| 13 | GO:0032947: protein complex scaffold | 1.73E-04 |
| 14 | GO:0003861: 3-isopropylmalate dehydratase activity | 1.73E-04 |
| 15 | GO:0003935: GTP cyclohydrolase II activity | 1.73E-04 |
| 16 | GO:0048038: quinone binding | 2.42E-04 |
| 17 | GO:0047627: adenylylsulfatase activity | 2.55E-04 |
| 18 | GO:0000254: C-4 methylsterol oxidase activity | 2.55E-04 |
| 19 | GO:0001053: plastid sigma factor activity | 3.43E-04 |
| 20 | GO:0051861: glycolipid binding | 3.43E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.43E-04 |
| 22 | GO:0016987: sigma factor activity | 3.43E-04 |
| 23 | GO:0030983: mismatched DNA binding | 5.37E-04 |
| 24 | GO:0004784: superoxide dismutase activity | 5.37E-04 |
| 25 | GO:0005506: iron ion binding | 7.41E-04 |
| 26 | GO:0046872: metal ion binding | 1.03E-03 |
| 27 | GO:0071949: FAD binding | 1.10E-03 |
| 28 | GO:0031072: heat shock protein binding | 1.77E-03 |
| 29 | GO:0051536: iron-sulfur cluster binding | 2.39E-03 |
| 30 | GO:0004176: ATP-dependent peptidase activity | 2.72E-03 |
| 31 | GO:0004518: nuclease activity | 4.58E-03 |
| 32 | GO:0003684: damaged DNA binding | 5.00E-03 |
| 33 | GO:0008237: metallopeptidase activity | 5.21E-03 |
| 34 | GO:0004519: endonuclease activity | 7.07E-03 |
| 35 | GO:0004222: metalloendopeptidase activity | 7.25E-03 |
| 36 | GO:0051539: 4 iron, 4 sulfur cluster binding | 8.75E-03 |
| 37 | GO:0004185: serine-type carboxypeptidase activity | 9.53E-03 |
| 38 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.01E-02 |
| 39 | GO:0016887: ATPase activity | 1.01E-02 |
| 40 | GO:0005198: structural molecule activity | 1.03E-02 |
| 41 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.18E-02 |
| 42 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.35E-02 |
| 43 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 44 | GO:0016829: lyase activity | 1.87E-02 |
| 45 | GO:0042802: identical protein binding | 2.64E-02 |
| 46 | GO:0016491: oxidoreductase activity | 3.09E-02 |
| 47 | GO:0008233: peptidase activity | 3.50E-02 |
| 48 | GO:0009055: electron carrier activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097218: sieve plate | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.58E-15 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.06E-13 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.21E-05 |
| 5 | GO:0000152: nuclear ubiquitin ligase complex | 4.04E-05 |
| 6 | GO:0042646: plastid nucleoid | 2.55E-04 |
| 7 | GO:0009534: chloroplast thylakoid | 3.43E-04 |
| 8 | GO:0055035: plastid thylakoid membrane | 4.37E-04 |
| 9 | GO:0031969: chloroplast membrane | 5.36E-04 |
| 10 | GO:0031359: integral component of chloroplast outer membrane | 7.49E-04 |
| 11 | GO:0042644: chloroplast nucleoid | 1.10E-03 |
| 12 | GO:0016604: nuclear body | 1.22E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.70E-03 |
| 14 | GO:0009579: thylakoid | 2.21E-03 |
| 15 | GO:0005769: early endosome | 2.23E-03 |
| 16 | GO:0009570: chloroplast stroma | 3.41E-03 |
| 17 | GO:0009295: nucleoid | 5.21E-03 |
| 18 | GO:0009536: plastid | 5.57E-03 |
| 19 | GO:0009707: chloroplast outer membrane | 6.77E-03 |
| 20 | GO:0031966: mitochondrial membrane | 1.12E-02 |
| 21 | GO:0010287: plastoglobule | 1.70E-02 |
| 22 | GO:0009524: phragmoplast | 1.84E-02 |
| 23 | GO:0005840: ribosome | 2.46E-02 |
| 24 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.24E-02 |
| 25 | GO:0005743: mitochondrial inner membrane | 4.43E-02 |