GO Enrichment Analysis of Co-expressed Genes with
AT5G35100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 2 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 6 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 7 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.49E-07 |
| 8 | GO:0010027: thylakoid membrane organization | 2.61E-06 |
| 9 | GO:0015979: photosynthesis | 4.54E-06 |
| 10 | GO:0042549: photosystem II stabilization | 2.35E-05 |
| 11 | GO:0048564: photosystem I assembly | 5.89E-05 |
| 12 | GO:0000476: maturation of 4.5S rRNA | 1.02E-04 |
| 13 | GO:0000967: rRNA 5'-end processing | 1.02E-04 |
| 14 | GO:0000481: maturation of 5S rRNA | 1.02E-04 |
| 15 | GO:0065002: intracellular protein transmembrane transport | 1.02E-04 |
| 16 | GO:0043007: maintenance of rDNA | 1.02E-04 |
| 17 | GO:0034337: RNA folding | 1.02E-04 |
| 18 | GO:0010493: Lewis a epitope biosynthetic process | 1.02E-04 |
| 19 | GO:0043953: protein transport by the Tat complex | 1.02E-04 |
| 20 | GO:0010207: photosystem II assembly | 2.37E-04 |
| 21 | GO:0006432: phenylalanyl-tRNA aminoacylation | 2.40E-04 |
| 22 | GO:0010024: phytochromobilin biosynthetic process | 2.40E-04 |
| 23 | GO:0034470: ncRNA processing | 2.40E-04 |
| 24 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.40E-04 |
| 25 | GO:0090391: granum assembly | 3.99E-04 |
| 26 | GO:0005977: glycogen metabolic process | 3.99E-04 |
| 27 | GO:0006788: heme oxidation | 3.99E-04 |
| 28 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.73E-04 |
| 29 | GO:2001141: regulation of RNA biosynthetic process | 5.73E-04 |
| 30 | GO:0006020: inositol metabolic process | 5.73E-04 |
| 31 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 5.73E-04 |
| 32 | GO:0006021: inositol biosynthetic process | 7.62E-04 |
| 33 | GO:0010021: amylopectin biosynthetic process | 7.62E-04 |
| 34 | GO:0009765: photosynthesis, light harvesting | 7.62E-04 |
| 35 | GO:0016558: protein import into peroxisome matrix | 9.62E-04 |
| 36 | GO:0016120: carotene biosynthetic process | 9.62E-04 |
| 37 | GO:0046855: inositol phosphate dephosphorylation | 1.17E-03 |
| 38 | GO:0016311: dephosphorylation | 1.40E-03 |
| 39 | GO:0018298: protein-chromophore linkage | 1.47E-03 |
| 40 | GO:0010196: nonphotochemical quenching | 1.65E-03 |
| 41 | GO:0030091: protein repair | 1.90E-03 |
| 42 | GO:0006605: protein targeting | 1.90E-03 |
| 43 | GO:0032508: DNA duplex unwinding | 1.90E-03 |
| 44 | GO:0000105: histidine biosynthetic process | 1.90E-03 |
| 45 | GO:0009231: riboflavin biosynthetic process | 1.90E-03 |
| 46 | GO:0016559: peroxisome fission | 1.90E-03 |
| 47 | GO:0009642: response to light intensity | 1.90E-03 |
| 48 | GO:0006875: cellular metal ion homeostasis | 1.90E-03 |
| 49 | GO:0017004: cytochrome complex assembly | 2.17E-03 |
| 50 | GO:0071482: cellular response to light stimulus | 2.17E-03 |
| 51 | GO:0009657: plastid organization | 2.17E-03 |
| 52 | GO:0019684: photosynthesis, light reaction | 3.36E-03 |
| 53 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.36E-03 |
| 54 | GO:0006352: DNA-templated transcription, initiation | 3.36E-03 |
| 55 | GO:0006415: translational termination | 3.36E-03 |
| 56 | GO:0006790: sulfur compound metabolic process | 3.69E-03 |
| 57 | GO:0005983: starch catabolic process | 3.69E-03 |
| 58 | GO:0045037: protein import into chloroplast stroma | 3.69E-03 |
| 59 | GO:2000012: regulation of auxin polar transport | 4.02E-03 |
| 60 | GO:0010020: chloroplast fission | 4.37E-03 |
| 61 | GO:0019853: L-ascorbic acid biosynthetic process | 4.72E-03 |
| 62 | GO:0046854: phosphatidylinositol phosphorylation | 4.72E-03 |
| 63 | GO:0006863: purine nucleobase transport | 5.09E-03 |
| 64 | GO:0000162: tryptophan biosynthetic process | 5.09E-03 |
| 65 | GO:0019953: sexual reproduction | 5.85E-03 |
| 66 | GO:0048511: rhythmic process | 6.24E-03 |
| 67 | GO:0019915: lipid storage | 6.24E-03 |
| 68 | GO:0071369: cellular response to ethylene stimulus | 7.06E-03 |
| 69 | GO:0006012: galactose metabolic process | 7.06E-03 |
| 70 | GO:0009306: protein secretion | 7.48E-03 |
| 71 | GO:0009561: megagametogenesis | 7.48E-03 |
| 72 | GO:0000413: protein peptidyl-prolyl isomerization | 8.35E-03 |
| 73 | GO:0048868: pollen tube development | 8.80E-03 |
| 74 | GO:0042752: regulation of circadian rhythm | 9.26E-03 |
| 75 | GO:0019252: starch biosynthetic process | 9.73E-03 |
| 76 | GO:0006635: fatty acid beta-oxidation | 1.02E-02 |
| 77 | GO:0010193: response to ozone | 1.02E-02 |
| 78 | GO:0009567: double fertilization forming a zygote and endosperm | 1.17E-02 |
| 79 | GO:0009658: chloroplast organization | 1.21E-02 |
| 80 | GO:0042128: nitrate assimilation | 1.43E-02 |
| 81 | GO:0007568: aging | 1.77E-02 |
| 82 | GO:0009867: jasmonic acid mediated signaling pathway | 1.89E-02 |
| 83 | GO:0009637: response to blue light | 1.89E-02 |
| 84 | GO:0016042: lipid catabolic process | 2.16E-02 |
| 85 | GO:0010114: response to red light | 2.26E-02 |
| 86 | GO:0006855: drug transmembrane transport | 2.52E-02 |
| 87 | GO:0006486: protein glycosylation | 2.80E-02 |
| 88 | GO:0010224: response to UV-B | 2.86E-02 |
| 89 | GO:0006096: glycolytic process | 3.15E-02 |
| 90 | GO:0009553: embryo sac development | 3.52E-02 |
| 91 | GO:0006396: RNA processing | 3.67E-02 |
| 92 | GO:0009555: pollen development | 3.93E-02 |
| 93 | GO:0009790: embryo development | 4.70E-02 |
| 94 | GO:0055085: transmembrane transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 4 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 8 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 9 | GO:0043495: protein anchor | 9.35E-06 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.83E-05 |
| 11 | GO:0019899: enzyme binding | 4.52E-05 |
| 12 | GO:0019203: carbohydrate phosphatase activity | 1.02E-04 |
| 13 | GO:0015088: copper uptake transmembrane transporter activity | 1.02E-04 |
| 14 | GO:0046920: alpha-(1->3)-fucosyltransferase activity | 1.02E-04 |
| 15 | GO:0050308: sugar-phosphatase activity | 1.02E-04 |
| 16 | GO:0019156: isoamylase activity | 2.40E-04 |
| 17 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.40E-04 |
| 18 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.40E-04 |
| 19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.40E-04 |
| 20 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.40E-04 |
| 21 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.40E-04 |
| 22 | GO:0030385: ferredoxin:thioredoxin reductase activity | 2.40E-04 |
| 23 | GO:0004826: phenylalanine-tRNA ligase activity | 2.40E-04 |
| 24 | GO:0005528: FK506 binding | 3.32E-04 |
| 25 | GO:0004751: ribose-5-phosphate isomerase activity | 3.99E-04 |
| 26 | GO:0022891: substrate-specific transmembrane transporter activity | 4.81E-04 |
| 27 | GO:0016149: translation release factor activity, codon specific | 5.73E-04 |
| 28 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.73E-04 |
| 29 | GO:0019843: rRNA binding | 7.34E-04 |
| 30 | GO:0004392: heme oxygenase (decyclizing) activity | 7.62E-04 |
| 31 | GO:0001053: plastid sigma factor activity | 7.62E-04 |
| 32 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.62E-04 |
| 33 | GO:0016987: sigma factor activity | 7.62E-04 |
| 34 | GO:0004556: alpha-amylase activity | 1.17E-03 |
| 35 | GO:2001070: starch binding | 1.17E-03 |
| 36 | GO:0016168: chlorophyll binding | 1.20E-03 |
| 37 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.40E-03 |
| 38 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.40E-03 |
| 39 | GO:0042802: identical protein binding | 1.47E-03 |
| 40 | GO:0004033: aldo-keto reductase (NADP) activity | 1.90E-03 |
| 41 | GO:0003747: translation release factor activity | 2.45E-03 |
| 42 | GO:0008417: fucosyltransferase activity | 2.45E-03 |
| 43 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.45E-03 |
| 44 | GO:0005381: iron ion transmembrane transporter activity | 2.74E-03 |
| 45 | GO:0000049: tRNA binding | 3.69E-03 |
| 46 | GO:0031072: heat shock protein binding | 4.02E-03 |
| 47 | GO:0043424: protein histidine kinase binding | 5.85E-03 |
| 48 | GO:0005345: purine nucleobase transmembrane transporter activity | 5.85E-03 |
| 49 | GO:0030570: pectate lyase activity | 7.06E-03 |
| 50 | GO:0008017: microtubule binding | 8.17E-03 |
| 51 | GO:0016788: hydrolase activity, acting on ester bonds | 1.23E-02 |
| 52 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.60E-02 |
| 53 | GO:0015238: drug transmembrane transporter activity | 1.65E-02 |
| 54 | GO:0052689: carboxylic ester hydrolase activity | 1.66E-02 |
| 55 | GO:0003993: acid phosphatase activity | 1.95E-02 |
| 56 | GO:0009055: electron carrier activity | 2.38E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-02 |
| 58 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.80E-02 |
| 59 | GO:0031625: ubiquitin protein ligase binding | 3.01E-02 |
| 60 | GO:0008289: lipid binding | 3.09E-02 |
| 61 | GO:0045735: nutrient reservoir activity | 3.15E-02 |
| 62 | GO:0051082: unfolded protein binding | 3.59E-02 |
| 63 | GO:0015035: protein disulfide oxidoreductase activity | 3.67E-02 |
| 64 | GO:0016829: lyase activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 3 | GO:0043235: receptor complex | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 3.69E-28 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 8.88E-23 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.13E-10 |
| 7 | GO:0009570: chloroplast stroma | 4.93E-09 |
| 8 | GO:0009579: thylakoid | 3.67E-08 |
| 9 | GO:0009534: chloroplast thylakoid | 3.84E-08 |
| 10 | GO:0009538: photosystem I reaction center | 5.54E-07 |
| 11 | GO:0009941: chloroplast envelope | 3.74E-06 |
| 12 | GO:0031977: thylakoid lumen | 1.12E-05 |
| 13 | GO:0009523: photosystem II | 4.07E-05 |
| 14 | GO:0009515: granal stacked thylakoid | 1.02E-04 |
| 15 | GO:0031361: integral component of thylakoid membrane | 1.02E-04 |
| 16 | GO:0030095: chloroplast photosystem II | 2.37E-04 |
| 17 | GO:0042651: thylakoid membrane | 3.67E-04 |
| 18 | GO:0033281: TAT protein transport complex | 3.99E-04 |
| 19 | GO:0031897: Tic complex | 7.62E-04 |
| 20 | GO:0009533: chloroplast stromal thylakoid | 1.65E-03 |
| 21 | GO:0055028: cortical microtubule | 3.05E-03 |
| 22 | GO:0090404: pollen tube tip | 3.36E-03 |
| 23 | GO:0012511: monolayer-surrounded lipid storage body | 3.36E-03 |
| 24 | GO:0032040: small-subunit processome | 3.69E-03 |
| 25 | GO:0010287: plastoglobule | 5.36E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 5.85E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 9.73E-03 |
| 28 | GO:0032580: Golgi cisterna membrane | 1.17E-02 |
| 29 | GO:0005778: peroxisomal membrane | 1.22E-02 |
| 30 | GO:0030529: intracellular ribonucleoprotein complex | 1.32E-02 |
| 31 | GO:0009707: chloroplast outer membrane | 1.60E-02 |
| 32 | GO:0015934: large ribosomal subunit | 1.77E-02 |
| 33 | GO:0016021: integral component of membrane | 2.46E-02 |
| 34 | GO:0016020: membrane | 3.05E-02 |
| 35 | GO:0009706: chloroplast inner membrane | 3.59E-02 |
| 36 | GO:0022626: cytosolic ribosome | 3.77E-02 |
| 37 | GO:0005759: mitochondrial matrix | 4.95E-02 |