co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G35080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019428: allantoin biosynthetic process	0.00E+00
2	GO:0019307: mannose biosynthetic process	0.00E+00
3	GO:0006489: dolichyl diphosphate biosynthetic process	0.00E+00
4	GO:0045047: protein targeting to ER	0.00E+00
5	GO:0006511: ubiquitin-dependent protein catabolic process	2.06E-27
6	GO:0051603: proteolysis involved in cellular protein catabolic process	7.18E-14
7	GO:0006457: protein folding	6.78E-12
8	GO:0034976: response to endoplasmic reticulum stress	3.36E-11
9	GO:0046686: response to cadmium ion	1.16E-08
10	GO:0045454: cell redox homeostasis	3.81E-06
11	GO:0009651: response to salt stress	3.87E-06
12	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.74E-05
13	GO:0010043: response to zinc ion	2.45E-05
14	GO:0006144: purine nucleobase metabolic process	4.18E-05
15	GO:0001560: regulation of cell growth by extracellular stimulus	4.18E-05
16	GO:0019628: urate catabolic process	4.18E-05
17	GO:0006487: protein N-linked glycosylation	9.57E-05
18	GO:0051788: response to misfolded protein	1.04E-04
19	GO:0030433: ubiquitin-dependent ERAD pathway	1.31E-04
20	GO:0006013: mannose metabolic process	1.78E-04
21	GO:0055074: calcium ion homeostasis	1.78E-04
22	GO:0009647: skotomorphogenesis	2.63E-04
23	GO:0051289: protein homotetramerization	2.63E-04
24	GO:0001676: long-chain fatty acid metabolic process	2.63E-04
25	GO:0009298: GDP-mannose biosynthetic process	2.63E-04
26	GO:0030163: protein catabolic process	2.89E-04
27	GO:0010363: regulation of plant-type hypersensitive response	3.53E-04
28	GO:0036065: fucosylation	4.50E-04
29	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	5.51E-04
30	GO:0043248: proteasome assembly	5.51E-04
31	GO:0009554: megasporogenesis	6.58E-04
32	GO:1901001: negative regulation of response to salt stress	6.58E-04
33	GO:0048528: post-embryonic root development	7.69E-04
34	GO:0006605: protein targeting	8.84E-04
35	GO:0031540: regulation of anthocyanin biosynthetic process	8.84E-04
36	GO:0030968: endoplasmic reticulum unfolded protein response	1.00E-03
37	GO:0046685: response to arsenic-containing substance	1.13E-03
38	GO:0010449: root meristem growth	1.25E-03
39	GO:0010205: photoinhibition	1.25E-03
40	GO:0043067: regulation of programmed cell death	1.25E-03
41	GO:0009553: embryo sac development	1.38E-03
42	GO:0048229: gametophyte development	1.53E-03
43	GO:0019853: L-ascorbic acid biosynthetic process	2.13E-03
44	GO:0009969: xyloglucan biosynthetic process	2.13E-03
45	GO:0015992: proton transport	2.80E-03
46	GO:0051028: mRNA transport	3.52E-03
47	GO:0000413: protein peptidyl-prolyl isomerization	3.71E-03
48	GO:0048868: pollen tube development	3.91E-03
49	GO:0048825: cotyledon development	4.31E-03
50	GO:0009556: microsporogenesis	4.31E-03
51	GO:0010193: response to ozone	4.51E-03
52	GO:0009567: double fertilization forming a zygote and endosperm	5.15E-03
53	GO:0016049: cell growth	6.74E-03
54	GO:0009817: defense response to fungus, incompatible interaction	6.98E-03
55	GO:0048364: root development	7.08E-03
56	GO:0009832: plant-type cell wall biogenesis	7.22E-03
57	GO:0006631: fatty acid metabolic process	9.28E-03
58	GO:0008283: cell proliferation	9.82E-03
59	GO:0000209: protein polyubiquitination	1.01E-02
60	GO:0009644: response to high light intensity	1.04E-02
61	GO:0009735: response to cytokinin	1.10E-02
62	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.12E-02
63	GO:0006486: protein glycosylation	1.21E-02
64	GO:0009736: cytokinin-activated signaling pathway	1.21E-02
65	GO:0009793: embryo development ending in seed dormancy	1.32E-02
66	GO:0048316: seed development	1.39E-02
67	GO:0009742: brassinosteroid mediated signaling pathway	1.62E-02
68	GO:0009790: embryo development	2.03E-02
69	GO:0006979: response to oxidative stress	2.47E-02
70	GO:0048366: leaf development	3.52E-02
71	GO:0006886: intracellular protein transport	4.24E-02
72	GO:0007275: multicellular organism development	4.79E-02
73	GO:0009408: response to heat	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
2	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
3	GO:0004615: phosphomannomutase activity	0.00E+00
4	GO:0004298: threonine-type endopeptidase activity	1.77E-41
5	GO:0008233: peptidase activity	2.37E-26
6	GO:0003756: protein disulfide isomerase activity	1.80E-10
7	GO:0051082: unfolded protein binding	4.37E-06
8	GO:0003975: UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity	4.18E-05
9	GO:1990381: ubiquitin-specific protease binding	4.18E-05
10	GO:0004175: endopeptidase activity	6.58E-05
11	GO:0008963: phospho-N-acetylmuramoyl-pentapeptide-transferase activity	1.04E-04
12	GO:0009678: hydrogen-translocating pyrophosphatase activity	2.63E-04
13	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	3.53E-04
14	GO:0036402: proteasome-activating ATPase activity	5.51E-04
15	GO:0102391: decanoate--CoA ligase activity	6.58E-04
16	GO:0004467: long-chain fatty acid-CoA ligase activity	7.69E-04
17	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	7.69E-04
18	GO:0004427: inorganic diphosphatase activity	7.69E-04
19	GO:0008417: fucosyltransferase activity	1.13E-03
20	GO:0017025: TBP-class protein binding	2.13E-03
21	GO:0030246: carbohydrate binding	2.71E-03
22	GO:0004540: ribonuclease activity	2.80E-03
23	GO:0005509: calcium ion binding	4.10E-03
24	GO:0016853: isomerase activity	4.11E-03
25	GO:0016887: ATPase activity	1.05E-02
26	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.09E-02
27	GO:0000166: nucleotide binding	1.21E-02
28	GO:0005515: protein binding	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0000502: proteasome complex	2.94E-42
3	GO:0005839: proteasome core complex	1.77E-41
4	GO:0019773: proteasome core complex, alpha-subunit complex	8.95E-19
5	GO:0005788: endoplasmic reticulum lumen	1.88E-11
6	GO:0005783: endoplasmic reticulum	3.02E-10
7	GO:0005829: cytosol	3.79E-10
8	GO:0005774: vacuolar membrane	1.55E-09
9	GO:0005773: vacuole	2.10E-06
10	GO:0031595: nuclear proteasome complex	1.07E-05
11	GO:0005737: cytoplasm	1.34E-05
12	GO:0022626: cytosolic ribosome	2.33E-05
13	GO:0008541: proteasome regulatory particle, lid subcomplex	4.16E-05
14	GO:0044322: endoplasmic reticulum quality control compartment	4.18E-05
15	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	4.18E-05
16	GO:0019774: proteasome core complex, beta-subunit complex	4.18E-05
17	GO:0000836: Hrd1p ubiquitin ligase complex	4.18E-05
18	GO:0046861: glyoxysomal membrane	1.78E-04
19	GO:0036513: Derlin-1 retrotranslocation complex	2.63E-04
20	GO:0031597: cytosolic proteasome complex	6.58E-04
21	GO:0000326: protein storage vacuole	1.00E-03
22	GO:0009514: glyoxysome	1.00E-03
23	GO:0008540: proteasome regulatory particle, base subcomplex	1.25E-03
24	GO:0048046: apoplast	1.31E-03
25	GO:0009507: chloroplast	1.75E-03
26	GO:0030176: integral component of endoplasmic reticulum membrane	2.13E-03
27	GO:0005769: early endosome	2.29E-03
28	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.08E-03
29	GO:0032580: Golgi cisterna membrane	5.15E-03
30	GO:0009505: plant-type cell wall	6.05E-03
31	GO:0005643: nuclear pore	6.98E-03
32	GO:0005819: spindle	8.75E-03
33	GO:0005886: plasma membrane	9.88E-03
34	GO:0005635: nuclear envelope	1.27E-02
35	GO:0005777: peroxisome	1.39E-02
36	GO:0005732: small nucleolar ribonucleoprotein complex	1.65E-02
37	GO:0005623: cell	1.86E-02
38	GO:0009524: phragmoplast	1.89E-02
39	GO:0005802: trans-Golgi network	1.94E-02
40	GO:0005794: Golgi apparatus	2.10E-02
41	GO:0009705: plant-type vacuole membrane	2.29E-02
42	GO:0005634: nucleus	2.90E-02
43	GO:0005789: endoplasmic reticulum membrane	3.74E-02
44	GO:0009506: plasmodesma	3.90E-02