co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G34940

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042430: indole-containing compound metabolic process	0.00E+00
2	GO:0046177: D-gluconate catabolic process	0.00E+00
3	GO:1902418: (+)-abscisic acid D-glucopyranosyl ester transmembrane transport	0.00E+00
4	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
5	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
6	GO:0006073: cellular glucan metabolic process	0.00E+00
7	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
8	GO:0042908: xenobiotic transport	0.00E+00
9	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
10	GO:0009856: pollination	0.00E+00
11	GO:0009722: detection of cytokinin stimulus	0.00E+00
12	GO:0018293: protein-FAD linkage	0.00E+00
13	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
14	GO:0006593: ornithine catabolic process	0.00E+00
15	GO:0071345: cellular response to cytokine stimulus	0.00E+00
16	GO:0055114: oxidation-reduction process	1.46E-07
17	GO:0009651: response to salt stress	2.54E-06
18	GO:0005975: carbohydrate metabolic process	3.42E-06
19	GO:0009817: defense response to fungus, incompatible interaction	1.76E-05
20	GO:0006099: tricarboxylic acid cycle	3.11E-05
21	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	4.99E-05
22	GO:0010189: vitamin E biosynthetic process	6.99E-05
23	GO:0031539: positive regulation of anthocyanin metabolic process	1.62E-04
24	GO:1903409: reactive oxygen species biosynthetic process	1.62E-04
25	GO:0009852: auxin catabolic process	1.62E-04
26	GO:0006560: proline metabolic process	1.62E-04
27	GO:0019544: arginine catabolic process to glutamate	1.62E-04
28	GO:0006148: inosine catabolic process	1.62E-04
29	GO:0000305: response to oxygen radical	1.62E-04
30	GO:0009627: systemic acquired resistance	2.32E-04
31	GO:0002213: defense response to insect	3.48E-04
32	GO:0010133: proline catabolic process to glutamate	3.69E-04
33	GO:0009915: phloem sucrose loading	3.69E-04
34	GO:0002215: defense response to nematode	3.69E-04
35	GO:0009833: plant-type primary cell wall biogenesis	5.56E-04
36	GO:0019762: glucosinolate catabolic process	5.56E-04
37	GO:0046686: response to cadmium ion	6.01E-04
38	GO:0051646: mitochondrion localization	6.04E-04
39	GO:0045493: xylan catabolic process	6.04E-04
40	GO:0044746: amino acid transmembrane export	6.04E-04
41	GO:0010017: red or far-red light signaling pathway	8.11E-04
42	GO:0009963: positive regulation of flavonoid biosynthetic process	8.63E-04
43	GO:0015700: arsenite transport	8.63E-04
44	GO:0006572: tyrosine catabolic process	8.63E-04
45	GO:1902476: chloride transmembrane transport	8.63E-04
46	GO:0071555: cell wall organization	9.00E-04
47	GO:0000271: polysaccharide biosynthetic process	1.11E-03
48	GO:0080022: primary root development	1.11E-03
49	GO:0015846: polyamine transport	1.14E-03
50	GO:0006749: glutathione metabolic process	1.14E-03
51	GO:0009694: jasmonic acid metabolic process	1.14E-03
52	GO:0006542: glutamine biosynthetic process	1.14E-03
53	GO:0006646: phosphatidylethanolamine biosynthetic process	1.14E-03
54	GO:0051781: positive regulation of cell division	1.14E-03
55	GO:0009696: salicylic acid metabolic process	1.45E-03
56	GO:1901657: glycosyl compound metabolic process	1.66E-03
57	GO:0003006: developmental process involved in reproduction	1.78E-03
58	GO:0002238: response to molecule of fungal origin	1.78E-03
59	GO:0006561: proline biosynthetic process	1.78E-03
60	GO:0006555: methionine metabolic process	1.78E-03
61	GO:0042732: D-xylose metabolic process	1.78E-03
62	GO:0010019: chloroplast-nucleus signaling pathway	2.14E-03
63	GO:0019509: L-methionine salvage from methylthioadenosine	2.14E-03
64	GO:1901001: negative regulation of response to salt stress	2.14E-03
65	GO:0009816: defense response to bacterium, incompatible interaction	2.22E-03
66	GO:0010411: xyloglucan metabolic process	2.47E-03
67	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.52E-03
68	GO:0006821: chloride transport	2.52E-03
69	GO:0008272: sulfate transport	2.52E-03
70	GO:0022904: respiratory electron transport chain	2.52E-03
71	GO:0080027: response to herbivore	2.52E-03
72	GO:0030244: cellulose biosynthetic process	2.74E-03
73	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.91E-03
74	GO:0010439: regulation of glucosinolate biosynthetic process	2.91E-03
75	GO:0048658: anther wall tapetum development	2.91E-03
76	GO:0006972: hyperosmotic response	3.33E-03
77	GO:0010099: regulation of photomorphogenesis	3.33E-03
78	GO:0015996: chlorophyll catabolic process	3.33E-03
79	GO:0080144: amino acid homeostasis	3.77E-03
80	GO:0009060: aerobic respiration	3.77E-03
81	GO:0046685: response to arsenic-containing substance	3.77E-03
82	GO:0006098: pentose-phosphate shunt	3.77E-03
83	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.22E-03
84	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	4.22E-03
85	GO:0042546: cell wall biogenesis	4.63E-03
86	GO:0010192: mucilage biosynthetic process	4.69E-03
87	GO:0009970: cellular response to sulfate starvation	4.69E-03
88	GO:0009636: response to toxic substance	4.99E-03
89	GO:0072593: reactive oxygen species metabolic process	5.19E-03
90	GO:0006855: drug transmembrane transport	5.19E-03
91	GO:0009684: indoleacetic acid biosynthetic process	5.19E-03
92	GO:0042538: hyperosmotic salinity response	5.58E-03
93	GO:0071365: cellular response to auxin stimulus	5.69E-03
94	GO:0006790: sulfur compound metabolic process	5.69E-03
95	GO:0012501: programmed cell death	5.69E-03
96	GO:0009809: lignin biosynthetic process	5.99E-03
97	GO:0051603: proteolysis involved in cellular protein catabolic process	6.20E-03
98	GO:0010102: lateral root morphogenesis	6.22E-03
99	GO:0006108: malate metabolic process	6.22E-03
100	GO:0006006: glucose metabolic process	6.22E-03
101	GO:0046274: lignin catabolic process	6.22E-03
102	GO:0009725: response to hormone	6.22E-03
103	GO:0006094: gluconeogenesis	6.22E-03
104	GO:0002237: response to molecule of bacterial origin	6.76E-03
105	GO:0009266: response to temperature stimulus	6.76E-03
106	GO:0006096: glycolytic process	7.08E-03
107	GO:0048316: seed development	7.31E-03
108	GO:0010039: response to iron ion	7.32E-03
109	GO:0046854: phosphatidylinositol phosphorylation	7.32E-03
110	GO:0042343: indole glucosinolate metabolic process	7.32E-03
111	GO:0009626: plant-type hypersensitive response	7.54E-03
112	GO:0034976: response to endoplasmic reticulum stress	7.90E-03
113	GO:0042753: positive regulation of circadian rhythm	7.90E-03
114	GO:0006636: unsaturated fatty acid biosynthetic process	7.90E-03
115	GO:0048511: rhythmic process	9.72E-03
116	GO:0098542: defense response to other organism	9.72E-03
117	GO:0016226: iron-sulfur cluster assembly	1.04E-02
118	GO:0019748: secondary metabolic process	1.04E-02
119	GO:0009625: response to insect	1.10E-02
120	GO:0009058: biosynthetic process	1.13E-02
121	GO:0006817: phosphate ion transport	1.17E-02
122	GO:0042744: hydrogen peroxide catabolic process	1.22E-02
123	GO:0042391: regulation of membrane potential	1.31E-02
124	GO:0010087: phloem or xylem histogenesis	1.31E-02
125	GO:0048653: anther development	1.31E-02
126	GO:0009958: positive gravitropism	1.38E-02
127	GO:0010154: fruit development	1.38E-02
128	GO:0010150: leaf senescence	1.48E-02
129	GO:0008654: phospholipid biosynthetic process	1.52E-02
130	GO:0055072: iron ion homeostasis	1.52E-02
131	GO:0006635: fatty acid beta-oxidation	1.60E-02
132	GO:0019761: glucosinolate biosynthetic process	1.67E-02
133	GO:0030163: protein catabolic process	1.75E-02
134	GO:0010252: auxin homeostasis	1.83E-02
135	GO:0009611: response to wounding	1.93E-02
136	GO:0009615: response to virus	2.07E-02
137	GO:0042128: nitrate assimilation	2.24E-02
138	GO:0006508: proteolysis	2.41E-02
139	GO:0008219: cell death	2.51E-02
140	GO:0055085: transmembrane transport	2.54E-02
141	GO:0010311: lateral root formation	2.60E-02
142	GO:0009813: flavonoid biosynthetic process	2.60E-02
143	GO:0009407: toxin catabolic process	2.69E-02
144	GO:0006811: ion transport	2.69E-02
145	GO:0010218: response to far red light	2.69E-02
146	GO:0007568: aging	2.78E-02
147	GO:0044550: secondary metabolite biosynthetic process	3.09E-02
148	GO:0006631: fatty acid metabolic process	3.35E-02
149	GO:0045454: cell redox homeostasis	3.40E-02
150	GO:0042542: response to hydrogen peroxide	3.45E-02
151	GO:0009640: photomorphogenesis	3.55E-02
152	GO:0010114: response to red light	3.55E-02
153	GO:0016042: lipid catabolic process	4.07E-02
154	GO:0031347: regulation of defense response	4.07E-02
155	GO:0009751: response to salicylic acid	4.12E-02
156	GO:0009585: red, far-red light phototransduction	4.39E-02
157	GO:0009414: response to water deprivation	4.39E-02
158	GO:0010224: response to UV-B	4.50E-02
159	GO:0042742: defense response to bacterium	4.52E-02
160	GO:0006979: response to oxidative stress	4.56E-02
161	GO:0006857: oligopeptide transport	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0000250: lanosterol synthase activity	0.00E+00
2	GO:0047782: coniferin beta-glucosidase activity	0.00E+00
3	GO:0046316: gluconokinase activity	0.00E+00
4	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
5	GO:0003842: 1-pyrroline-5-carboxylate dehydrogenase activity	0.00E+00
6	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
7	GO:0033961: cis-stilbene-oxide hydrolase activity	0.00E+00
8	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
9	GO:1902417: (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity	0.00E+00
10	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
11	GO:0009045: xylose isomerase activity	0.00E+00
12	GO:0080109: indole-3-acetonitrile nitrile hydratase activity	1.29E-06
13	GO:0080061: indole-3-acetonitrile nitrilase activity	4.78E-06
14	GO:0000257: nitrilase activity	1.11E-05
15	GO:0080032: methyl jasmonate esterase activity	2.06E-05
16	GO:0008177: succinate dehydrogenase (ubiquinone) activity	3.35E-05
17	GO:0080030: methyl indole-3-acetate esterase activity	4.99E-05
18	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.92E-05
19	GO:0005507: copper ion binding	8.53E-05
20	GO:0016491: oxidoreductase activity	8.91E-05
21	GO:0070401: NADP+ binding	1.62E-04
22	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.62E-04
23	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	1.62E-04
24	GO:0045437: uridine nucleosidase activity	1.62E-04
25	GO:0009671: nitrate:proton symporter activity	1.62E-04
26	GO:0071992: phytochelatin transmembrane transporter activity	1.62E-04
27	GO:0004307: ethanolaminephosphotransferase activity	1.62E-04
28	GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	1.62E-04
29	GO:0016229: steroid dehydrogenase activity	1.62E-04
30	GO:0004347: glucose-6-phosphate isomerase activity	1.62E-04
31	GO:0001530: lipopolysaccharide binding	1.62E-04
32	GO:0016780: phosphotransferase activity, for other substituted phosphate groups	1.62E-04
33	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.84E-04
34	GO:0051213: dioxygenase activity	1.99E-04
35	GO:0102483: scopolin beta-glucosidase activity	2.49E-04
36	GO:0008559: xenobiotic-transporting ATPase activity	3.02E-04
37	GO:0030572: phosphatidyltransferase activity	3.69E-04
38	GO:0047517: 1,4-beta-D-xylan synthase activity	3.69E-04
39	GO:0004142: diacylglycerol cholinephosphotransferase activity	3.69E-04
40	GO:0051980: iron-nicotianamine transmembrane transporter activity	3.69E-04
41	GO:0004362: glutathione-disulfide reductase activity	3.69E-04
42	GO:0015179: L-amino acid transmembrane transporter activity	3.69E-04
43	GO:0004047: aminomethyltransferase activity	3.69E-04
44	GO:0047724: inosine nucleosidase activity	3.69E-04
45	GO:0008422: beta-glucosidase activity	4.38E-04
46	GO:0004867: serine-type endopeptidase inhibitor activity	5.00E-04
47	GO:0004557: alpha-galactosidase activity	6.04E-04
48	GO:0052692: raffinose alpha-galactosidase activity	6.04E-04
49	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	6.04E-04
50	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	6.04E-04
51	GO:0010277: chlorophyllide a oxygenase [overall] activity	6.04E-04
52	GO:0016788: hydrolase activity, acting on ester bonds	7.70E-04
53	GO:0004108: citrate (Si)-synthase activity	8.63E-04
54	GO:0015203: polyamine transmembrane transporter activity	8.63E-04
55	GO:0080031: methyl salicylate esterase activity	8.63E-04
56	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	8.63E-04
57	GO:0015186: L-glutamine transmembrane transporter activity	8.63E-04
58	GO:0016760: cellulose synthase (UDP-forming) activity	8.83E-04
59	GO:0009044: xylan 1,4-beta-xylosidase activity	1.14E-03
60	GO:0050302: indole-3-acetaldehyde oxidase activity	1.14E-03
61	GO:0005253: anion channel activity	1.14E-03
62	GO:0016866: intramolecular transferase activity	1.14E-03
63	GO:0004301: epoxide hydrolase activity	1.14E-03
64	GO:0004659: prenyltransferase activity	1.14E-03
65	GO:0000104: succinate dehydrogenase activity	1.45E-03
66	GO:0051538: 3 iron, 4 sulfur cluster binding	1.45E-03
67	GO:0004356: glutamate-ammonia ligase activity	1.45E-03
68	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.47E-03
69	GO:0046872: metal ion binding	1.51E-03
70	GO:0004197: cysteine-type endopeptidase activity	1.56E-03
71	GO:0016759: cellulose synthase activity	1.77E-03
72	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.78E-03
73	GO:0004462: lactoylglutathione lyase activity	1.78E-03
74	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.78E-03
75	GO:0016615: malate dehydrogenase activity	1.78E-03
76	GO:0004866: endopeptidase inhibitor activity	1.78E-03
77	GO:0005247: voltage-gated chloride channel activity	1.78E-03
78	GO:0030170: pyridoxal phosphate binding	1.84E-03
79	GO:0030060: L-malate dehydrogenase activity	2.14E-03
80	GO:0005261: cation channel activity	2.14E-03
81	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.14E-03
82	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.14E-03
83	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.47E-03
84	GO:0004033: aldo-keto reductase (NADP) activity	2.91E-03
85	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.91E-03
86	GO:0008271: secondary active sulfate transmembrane transporter activity	3.33E-03
87	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.46E-03
88	GO:0050661: NADP binding	3.93E-03
89	GO:0015174: basic amino acid transmembrane transporter activity	4.22E-03
90	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.22E-03
91	GO:0051537: 2 iron, 2 sulfur cluster binding	4.81E-03
92	GO:0015293: symporter activity	4.99E-03
93	GO:0052716: hydroquinone:oxygen oxidoreductase activity	5.69E-03
94	GO:0015198: oligopeptide transporter activity	5.69E-03
95	GO:0015116: sulfate transmembrane transporter activity	5.69E-03
96	GO:0004022: alcohol dehydrogenase (NAD) activity	6.22E-03
97	GO:0008234: cysteine-type peptidase activity	6.63E-03
98	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.76E-03
99	GO:0008061: chitin binding	7.32E-03
100	GO:0004190: aspartic-type endopeptidase activity	7.32E-03
101	GO:0030552: cAMP binding	7.32E-03
102	GO:0030553: cGMP binding	7.32E-03
103	GO:0020037: heme binding	7.69E-03
104	GO:0008134: transcription factor binding	8.48E-03
105	GO:0051536: iron-sulfur cluster binding	8.48E-03
106	GO:0005216: ion channel activity	9.09E-03
107	GO:0008324: cation transmembrane transporter activity	9.09E-03
108	GO:0004540: ribonuclease activity	9.72E-03
109	GO:0035251: UDP-glucosyltransferase activity	9.72E-03
110	GO:0009055: electron carrier activity	9.93E-03
111	GO:0003756: protein disulfide isomerase activity	1.17E-02
112	GO:0004252: serine-type endopeptidase activity	1.19E-02
113	GO:0005249: voltage-gated potassium channel activity	1.31E-02
114	GO:0030551: cyclic nucleotide binding	1.31E-02
115	GO:0015297: antiporter activity	1.41E-02
116	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.88E-02
117	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.91E-02
118	GO:0008483: transaminase activity	1.91E-02
119	GO:0004601: peroxidase activity	2.29E-02
120	GO:0016740: transferase activity	2.41E-02
121	GO:0008270: zinc ion binding	2.44E-02
122	GO:0015238: drug transmembrane transporter activity	2.60E-02
123	GO:0050660: flavin adenine dinucleotide binding	2.65E-02
124	GO:0050897: cobalt ion binding	2.78E-02
125	GO:0052689: carboxylic ester hydrolase activity	3.14E-02
126	GO:0005516: calmodulin binding	3.14E-02
127	GO:0051539: 4 iron, 4 sulfur cluster binding	3.26E-02
128	GO:0004364: glutathione transferase activity	3.45E-02
129	GO:0004185: serine-type carboxypeptidase activity	3.55E-02
130	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.67E-02
131	GO:0051287: NAD binding	4.07E-02
132	GO:0005506: iron ion binding	4.43E-02
133	GO:0003690: double-stranded DNA binding	4.50E-02
134	GO:0016298: lipase activity	4.50E-02
135	GO:0044212: transcription regulatory region DNA binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0005759: mitochondrial matrix	2.22E-06
2	GO:0048046: apoplast	1.04E-04
3	GO:0005576: extracellular region	1.77E-04
4	GO:0005777: peroxisome	2.83E-04
5	GO:0045281: succinate dehydrogenase complex	3.69E-04
6	GO:0005578: proteinaceous extracellular matrix	3.96E-04
7	GO:0005764: lysosome	4.47E-04
8	GO:0005615: extracellular space	4.56E-04
9	GO:0005773: vacuole	1.06E-03
10	GO:0055035: plastid thylakoid membrane	1.45E-03
11	GO:0034707: chloride channel complex	1.78E-03
12	GO:0045273: respiratory chain complex II	2.91E-03
13	GO:0000325: plant-type vacuole	3.16E-03
14	GO:0010494: cytoplasmic stress granule	3.77E-03
15	GO:0005618: cell wall	4.60E-03
16	GO:0031012: extracellular matrix	6.22E-03
17	GO:0005774: vacuolar membrane	1.03E-02
18	GO:0005887: integral component of plasma membrane	1.34E-02
19	GO:0005886: plasma membrane	1.53E-02
20	GO:0005829: cytosol	1.59E-02
21	GO:0000932: P-body	2.07E-02
22	GO:0019005: SCF ubiquitin ligase complex	2.51E-02
23	GO:0005737: cytoplasm	2.84E-02
24	GO:0031966: mitochondrial membrane	4.18E-02
25	GO:0005794: Golgi apparatus	4.84E-02