GO Enrichment Analysis of Co-expressed Genes with
AT5G28740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009560: embryo sac egg cell differentiation | 0.00E+00 |
| 2 | GO:0019481: L-alanine catabolic process, by transamination | 0.00E+00 |
| 3 | GO:0051131: chaperone-mediated protein complex assembly | 2.44E-07 |
| 4 | GO:0009408: response to heat | 1.23E-05 |
| 5 | GO:0018920: glyphosate metabolic process | 1.77E-05 |
| 6 | GO:0099636: cytoplasmic streaming | 1.77E-05 |
| 7 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 1.77E-05 |
| 8 | GO:0051014: actin filament severing | 1.77E-05 |
| 9 | GO:0071277: cellular response to calcium ion | 1.77E-05 |
| 10 | GO:0061077: chaperone-mediated protein folding | 3.48E-05 |
| 11 | GO:0010155: regulation of proton transport | 4.61E-05 |
| 12 | GO:0009805: coumarin biosynthetic process | 4.61E-05 |
| 13 | GO:0010372: positive regulation of gibberellin biosynthetic process | 4.61E-05 |
| 14 | GO:0070475: rRNA base methylation | 8.18E-05 |
| 15 | GO:0009816: defense response to bacterium, incompatible interaction | 1.28E-04 |
| 16 | GO:0001709: cell fate determination | 1.69E-04 |
| 17 | GO:1902347: response to strigolactone | 1.69E-04 |
| 18 | GO:0051764: actin crosslink formation | 1.69E-04 |
| 19 | GO:0000470: maturation of LSU-rRNA | 2.72E-04 |
| 20 | GO:0009423: chorismate biosynthetic process | 3.27E-04 |
| 21 | GO:0006744: ubiquinone biosynthetic process | 3.84E-04 |
| 22 | GO:0051693: actin filament capping | 3.84E-04 |
| 23 | GO:0006402: mRNA catabolic process | 4.43E-04 |
| 24 | GO:0050821: protein stabilization | 4.43E-04 |
| 25 | GO:0048658: anther wall tapetum development | 4.43E-04 |
| 26 | GO:0006491: N-glycan processing | 4.43E-04 |
| 27 | GO:0017004: cytochrome complex assembly | 5.05E-04 |
| 28 | GO:0009699: phenylpropanoid biosynthetic process | 5.05E-04 |
| 29 | GO:0015996: chlorophyll catabolic process | 5.05E-04 |
| 30 | GO:0046685: response to arsenic-containing substance | 5.68E-04 |
| 31 | GO:0008202: steroid metabolic process | 6.32E-04 |
| 32 | GO:0090332: stomatal closure | 6.32E-04 |
| 33 | GO:0030042: actin filament depolymerization | 6.32E-04 |
| 34 | GO:0006457: protein folding | 6.66E-04 |
| 35 | GO:0009845: seed germination | 6.82E-04 |
| 36 | GO:0019538: protein metabolic process | 6.99E-04 |
| 37 | GO:0009073: aromatic amino acid family biosynthetic process | 7.68E-04 |
| 38 | GO:0010015: root morphogenesis | 7.68E-04 |
| 39 | GO:0007166: cell surface receptor signaling pathway | 9.76E-04 |
| 40 | GO:0007015: actin filament organization | 9.82E-04 |
| 41 | GO:0034605: cellular response to heat | 9.82E-04 |
| 42 | GO:0090351: seedling development | 1.06E-03 |
| 43 | GO:0070588: calcium ion transmembrane transport | 1.06E-03 |
| 44 | GO:0051017: actin filament bundle assembly | 1.21E-03 |
| 45 | GO:0006487: protein N-linked glycosylation | 1.21E-03 |
| 46 | GO:0007010: cytoskeleton organization | 1.21E-03 |
| 47 | GO:0010187: negative regulation of seed germination | 1.21E-03 |
| 48 | GO:0071215: cellular response to abscisic acid stimulus | 1.54E-03 |
| 49 | GO:0009686: gibberellin biosynthetic process | 1.54E-03 |
| 50 | GO:0080167: response to karrikin | 1.60E-03 |
| 51 | GO:0009306: protein secretion | 1.63E-03 |
| 52 | GO:0042631: cellular response to water deprivation | 1.81E-03 |
| 53 | GO:0046686: response to cadmium ion | 2.01E-03 |
| 54 | GO:0002229: defense response to oomycetes | 2.19E-03 |
| 55 | GO:0031047: gene silencing by RNA | 2.29E-03 |
| 56 | GO:0010090: trichome morphogenesis | 2.39E-03 |
| 57 | GO:0007267: cell-cell signaling | 2.60E-03 |
| 58 | GO:0010286: heat acclimation | 2.60E-03 |
| 59 | GO:0001666: response to hypoxia | 2.80E-03 |
| 60 | GO:0009615: response to virus | 2.80E-03 |
| 61 | GO:0048573: photoperiodism, flowering | 3.13E-03 |
| 62 | GO:0016049: cell growth | 3.24E-03 |
| 63 | GO:0008219: cell death | 3.36E-03 |
| 64 | GO:0048767: root hair elongation | 3.47E-03 |
| 65 | GO:0009813: flavonoid biosynthetic process | 3.47E-03 |
| 66 | GO:0045087: innate immune response | 3.94E-03 |
| 67 | GO:0008283: cell proliferation | 4.68E-03 |
| 68 | GO:0009965: leaf morphogenesis | 5.07E-03 |
| 69 | GO:0009809: lignin biosynthetic process | 5.75E-03 |
| 70 | GO:0006486: protein glycosylation | 5.75E-03 |
| 71 | GO:0010224: response to UV-B | 5.89E-03 |
| 72 | GO:0006417: regulation of translation | 6.17E-03 |
| 73 | GO:0009553: embryo sac development | 7.19E-03 |
| 74 | GO:0006396: RNA processing | 7.49E-03 |
| 75 | GO:0009742: brassinosteroid mediated signaling pathway | 7.64E-03 |
| 76 | GO:0000398: mRNA splicing, via spliceosome | 8.10E-03 |
| 77 | GO:0042742: defense response to bacterium | 8.30E-03 |
| 78 | GO:0006413: translational initiation | 1.02E-02 |
| 79 | GO:0048366: leaf development | 1.64E-02 |
| 80 | GO:0006886: intracellular protein transport | 1.98E-02 |
| 81 | GO:0006869: lipid transport | 2.07E-02 |
| 82 | GO:0006397: mRNA processing | 2.32E-02 |
| 83 | GO:0048364: root development | 2.32E-02 |
| 84 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.75E-02 |
| 85 | GO:0009651: response to salt stress | 2.80E-02 |
| 86 | GO:0009908: flower development | 3.15E-02 |
| 87 | GO:0009555: pollen development | 3.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046409: p-coumarate 3-hydroxylase activity | 0.00E+00 |
| 2 | GO:0030621: U4 snRNA binding | 0.00E+00 |
| 3 | GO:0047734: CDP-glycerol diphosphatase activity | 0.00E+00 |
| 4 | GO:0005524: ATP binding | 3.14E-06 |
| 5 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 1.77E-05 |
| 6 | GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity | 1.77E-05 |
| 7 | GO:0051082: unfolded protein binding | 2.14E-05 |
| 8 | GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | 1.23E-04 |
| 9 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 1.23E-04 |
| 10 | GO:0047631: ADP-ribose diphosphatase activity | 2.19E-04 |
| 11 | GO:0002020: protease binding | 2.19E-04 |
| 12 | GO:0017070: U6 snRNA binding | 2.19E-04 |
| 13 | GO:0003729: mRNA binding | 2.72E-04 |
| 14 | GO:0004559: alpha-mannosidase activity | 3.27E-04 |
| 15 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 4.43E-04 |
| 16 | GO:0008142: oxysterol binding | 5.05E-04 |
| 17 | GO:0005388: calcium-transporting ATPase activity | 9.08E-04 |
| 18 | GO:0033612: receptor serine/threonine kinase binding | 1.37E-03 |
| 19 | GO:0004518: nuclease activity | 2.29E-03 |
| 20 | GO:0051015: actin filament binding | 2.39E-03 |
| 21 | GO:0005515: protein binding | 3.09E-03 |
| 22 | GO:0004004: ATP-dependent RNA helicase activity | 3.13E-03 |
| 23 | GO:0030247: polysaccharide binding | 3.13E-03 |
| 24 | GO:0035091: phosphatidylinositol binding | 4.94E-03 |
| 25 | GO:0005516: calmodulin binding | 6.17E-03 |
| 26 | GO:0003779: actin binding | 7.19E-03 |
| 27 | GO:0004386: helicase activity | 7.79E-03 |
| 28 | GO:0005215: transporter activity | 9.18E-03 |
| 29 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.02E-02 |
| 30 | GO:0015297: antiporter activity | 1.04E-02 |
| 31 | GO:0003743: translation initiation factor activity | 1.20E-02 |
| 32 | GO:0042802: identical protein binding | 1.27E-02 |
| 33 | GO:0046982: protein heterodimerization activity | 1.44E-02 |
| 34 | GO:0003682: chromatin binding | 1.52E-02 |
| 35 | GO:0004497: monooxygenase activity | 1.70E-02 |
| 36 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.94E-02 |
| 37 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.05E-02 |
| 38 | GO:0004722: protein serine/threonine phosphatase activity | 2.07E-02 |
| 39 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 2.09E-02 |
| 40 | GO:0008289: lipid binding | 2.85E-02 |
| 41 | GO:0016887: ATPase activity | 3.07E-02 |
| 42 | GO:0000166: nucleotide binding | 3.39E-02 |
| 43 | GO:0003676: nucleic acid binding | 3.43E-02 |
| 44 | GO:0016740: transferase activity | 3.90E-02 |
| 45 | GO:0016301: kinase activity | 4.04E-02 |
| 46 | GO:0004674: protein serine/threonine kinase activity | 4.10E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016442: RISC complex | 1.77E-05 |
| 2 | GO:0005746: mitochondrial respiratory chain | 2.19E-04 |
| 3 | GO:0016363: nuclear matrix | 3.27E-04 |
| 4 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 5.05E-04 |
| 5 | GO:0010494: cytoplasmic stress granule | 5.68E-04 |
| 6 | GO:0005829: cytosol | 6.68E-04 |
| 7 | GO:0048471: perinuclear region of cytoplasm | 7.68E-04 |
| 8 | GO:0005884: actin filament | 7.68E-04 |
| 9 | GO:0043234: protein complex | 1.13E-03 |
| 10 | GO:0005886: plasma membrane | 1.41E-03 |
| 11 | GO:0043231: intracellular membrane-bounded organelle | 2.57E-03 |
| 12 | GO:0000932: P-body | 2.80E-03 |
| 13 | GO:0005783: endoplasmic reticulum | 2.87E-03 |
| 14 | GO:0005856: cytoskeleton | 5.07E-03 |
| 15 | GO:0005635: nuclear envelope | 6.03E-03 |
| 16 | GO:0005681: spliceosomal complex | 6.45E-03 |
| 17 | GO:0005618: cell wall | 6.54E-03 |
| 18 | GO:0016607: nuclear speck | 6.60E-03 |
| 19 | GO:0010008: endosome membrane | 6.60E-03 |
| 20 | GO:0005768: endosome | 7.47E-03 |
| 21 | GO:0009506: plasmodesma | 7.55E-03 |
| 22 | GO:0005623: cell | 8.74E-03 |
| 23 | GO:0005794: Golgi apparatus | 1.20E-02 |
| 24 | GO:0005730: nucleolus | 1.41E-02 |
| 25 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.56E-02 |
| 26 | GO:0005737: cytoplasm | 2.01E-02 |
| 27 | GO:0005743: mitochondrial inner membrane | 2.14E-02 |
| 28 | GO:0005887: integral component of plasma membrane | 2.80E-02 |
| 29 | GO:0022626: cytosolic ribosome | 3.28E-02 |
| 30 | GO:0005802: trans-Golgi network | 4.74E-02 |