Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G28640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905177: tracheary element differentiation0.00E+00
2GO:0090627: plant epidermal cell differentiation0.00E+00
3GO:0042761: very long-chain fatty acid biosynthetic process2.19E-05
4GO:0010025: wax biosynthetic process6.61E-05
5GO:0048569: post-embryonic animal organ development8.78E-05
6GO:0071367: cellular response to brassinosteroid stimulus1.52E-04
7GO:0010623: programmed cell death involved in cell development1.52E-04
8GO:0010371: regulation of gibberellin biosynthetic process2.25E-04
9GO:1901000: regulation of response to salt stress2.25E-04
10GO:0030100: regulation of endocytosis2.25E-04
11GO:0010104: regulation of ethylene-activated signaling pathway2.25E-04
12GO:0022622: root system development3.05E-04
13GO:0010508: positive regulation of autophagy3.05E-04
14GO:0006461: protein complex assembly3.89E-04
15GO:0009823: cytokinin catabolic process3.89E-04
16GO:0006656: phosphatidylcholine biosynthetic process3.89E-04
17GO:0009913: epidermal cell differentiation4.78E-04
18GO:0071470: cellular response to osmotic stress5.70E-04
19GO:0010103: stomatal complex morphogenesis6.66E-04
20GO:0032880: regulation of protein localization6.66E-04
21GO:0009636: response to toxic substance6.92E-04
22GO:2000070: regulation of response to water deprivation7.68E-04
23GO:0030091: protein repair7.68E-04
24GO:0009690: cytokinin metabolic process7.68E-04
25GO:0001558: regulation of cell growth8.71E-04
26GO:0043086: negative regulation of catalytic activity9.63E-04
27GO:0016024: CDP-diacylglycerol biosynthetic process1.44E-03
28GO:0009058: biosynthetic process1.50E-03
29GO:0006094: gluconeogenesis1.57E-03
30GO:2000012: regulation of auxin polar transport1.57E-03
31GO:0010143: cutin biosynthetic process1.70E-03
32GO:0006289: nucleotide-excision repair2.12E-03
33GO:0051302: regulation of cell division2.26E-03
34GO:0007017: microtubule-based process2.26E-03
35GO:0010431: seed maturation2.41E-03
36GO:0071369: cellular response to ethylene stimulus2.71E-03
37GO:0071215: cellular response to abscisic acid stimulus2.71E-03
38GO:0010089: xylem development2.87E-03
39GO:0006284: base-excision repair2.87E-03
40GO:0008284: positive regulation of cell proliferation3.03E-03
41GO:0009958: positive gravitropism3.36E-03
42GO:0048825: cotyledon development3.70E-03
43GO:0010583: response to cyclopentenone4.06E-03
44GO:0006310: DNA recombination4.42E-03
45GO:0006974: cellular response to DNA damage stimulus5.38E-03
46GO:0006281: DNA repair5.43E-03
47GO:0009407: toxin catabolic process6.40E-03
48GO:0048527: lateral root development6.61E-03
49GO:0006631: fatty acid metabolic process7.95E-03
50GO:0000209: protein polyubiquitination8.65E-03
51GO:0009555: pollen development9.64E-03
52GO:0006096: glycolytic process1.17E-02
53GO:0009742: brassinosteroid mediated signaling pathway1.38E-02
54GO:0009845: seed germination1.65E-02
55GO:0071555: cell wall organization1.96E-02
56GO:0006979: response to oxidative stress1.97E-02
57GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.12E-02
58GO:0030154: cell differentiation2.13E-02
59GO:0015031: protein transport2.49E-02
60GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.19E-02
61GO:0045454: cell redox homeostasis3.54E-02
62GO:0016042: lipid catabolic process4.03E-02
63GO:0006629: lipid metabolic process4.11E-02
RankGO TermAdjusted P value
1GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity3.50E-05
2GO:0004105: choline-phosphate cytidylyltransferase activity3.50E-05
3GO:0050736: O-malonyltransferase activity8.78E-05
4GO:0017108: 5'-flap endonuclease activity1.52E-04
5GO:0019104: DNA N-glycosylase activity3.05E-04
6GO:0019139: cytokinin dehydrogenase activity3.89E-04
7GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.78E-04
8GO:0004332: fructose-bisphosphate aldolase activity4.78E-04
9GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.78E-04
10GO:0033743: peptide-methionine (R)-S-oxide reductase activity5.70E-04
11GO:0003924: GTPase activity6.94E-04
12GO:0016209: antioxidant activity7.68E-04
13GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups9.93E-04
14GO:0047372: acylglycerol lipase activity1.32E-03
15GO:0008083: growth factor activity1.70E-03
16GO:0016740: transferase activity1.80E-03
17GO:0046910: pectinesterase inhibitor activity1.82E-03
18GO:0005525: GTP binding2.63E-03
19GO:0061630: ubiquitin protein ligase activity3.88E-03
20GO:0004518: nuclease activity4.06E-03
21GO:0003684: damaged DNA binding4.42E-03
22GO:0016791: phosphatase activity4.42E-03
23GO:0005200: structural constituent of cytoskeleton4.60E-03
24GO:0016614: oxidoreductase activity, acting on CH-OH group of donors6.61E-03
25GO:0004364: glutathione transferase activity8.18E-03
26GO:0031625: ubiquitin protein ligase binding1.11E-02
27GO:0016874: ligase activity1.27E-02
28GO:0016746: transferase activity, transferring acyl groups1.36E-02
29GO:0044212: transcription regulatory region DNA binding1.96E-02
30GO:0043565: sequence-specific DNA binding2.70E-02
31GO:0016788: hydrolase activity, acting on ester bonds2.71E-02
32GO:0050660: flavin adenine dinucleotide binding2.96E-02
33GO:0052689: carboxylic ester hydrolase activity3.34E-02
34GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.54E-02
35GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.82E-02
RankGO TermAdjusted P value
1GO:0033557: Slx1-Slx4 complex0.00E+00
2GO:0005798: Golgi-associated vesicle4.78E-04
3GO:0045298: tubulin complex9.78E-04
4GO:0005769: early endosome1.97E-03
5GO:0005615: extracellular space2.17E-03
6GO:0005783: endoplasmic reticulum1.08E-02
7GO:0005622: intracellular1.72E-02
8GO:0005874: microtubule3.04E-02
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Gene type



Gene DE type