co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G27700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007530: sex determination	0.00E+00
2	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
3	GO:0006412: translation	2.63E-144
4	GO:0042254: ribosome biogenesis	1.62E-58
5	GO:0000027: ribosomal large subunit assembly	3.42E-12
6	GO:0000028: ribosomal small subunit assembly	4.55E-09
7	GO:0000387: spliceosomal snRNP assembly	1.88E-06
8	GO:0000398: mRNA splicing, via spliceosome	9.55E-06
9	GO:0009955: adaxial/abaxial pattern specification	1.19E-05
10	GO:1902626: assembly of large subunit precursor of preribosome	3.70E-05
11	GO:0006626: protein targeting to mitochondrion	1.66E-04
12	GO:0006414: translational elongation	4.68E-04
13	GO:2001006: regulation of cellulose biosynthetic process	4.98E-04
14	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.98E-04
15	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.98E-04
16	GO:0018002: N-terminal peptidyl-glutamic acid acetylation	4.98E-04
17	GO:0006407: rRNA export from nucleus	4.98E-04
18	GO:0006475: internal protein amino acid acetylation	4.98E-04
19	GO:0015801: aromatic amino acid transport	4.98E-04
20	GO:0017198: N-terminal peptidyl-serine acetylation	4.98E-04
21	GO:0030490: maturation of SSU-rRNA	4.98E-04
22	GO:0009245: lipid A biosynthetic process	9.28E-04
23	GO:0048569: post-embryonic animal organ development	1.07E-03
24	GO:0006452: translational frameshifting	1.07E-03
25	GO:0045905: positive regulation of translational termination	1.07E-03
26	GO:0071668: plant-type cell wall assembly	1.07E-03
27	GO:0045901: positive regulation of translational elongation	1.07E-03
28	GO:0009735: response to cytokinin	1.49E-03
29	GO:0009150: purine ribonucleotide metabolic process	1.75E-03
30	GO:0002181: cytoplasmic translation	1.75E-03
31	GO:0045793: positive regulation of cell size	1.75E-03
32	GO:0034227: tRNA thio-modification	1.75E-03
33	GO:0042256: mature ribosome assembly	1.75E-03
34	GO:0090506: axillary shoot meristem initiation	1.75E-03
35	GO:0006446: regulation of translational initiation	2.16E-03
36	GO:0070301: cellular response to hydrogen peroxide	2.54E-03
37	GO:0006241: CTP biosynthetic process	2.54E-03
38	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.54E-03
39	GO:0006165: nucleoside diphosphate phosphorylation	2.54E-03
40	GO:0006228: UTP biosynthetic process	2.54E-03
41	GO:0006168: adenine salvage	2.54E-03
42	GO:0032877: positive regulation of DNA endoreduplication	2.54E-03
43	GO:0006166: purine ribonucleoside salvage	2.54E-03
44	GO:0042274: ribosomal small subunit biogenesis	3.42E-03
45	GO:0006183: GTP biosynthetic process	3.42E-03
46	GO:2000032: regulation of secondary shoot formation	3.42E-03
47	GO:0051781: positive regulation of cell division	3.42E-03
48	GO:0006413: translational initiation	4.17E-03
49	GO:0007029: endoplasmic reticulum organization	4.38E-03
50	GO:0044209: AMP salvage	4.38E-03
51	GO:0009965: leaf morphogenesis	4.91E-03
52	GO:0000470: maturation of LSU-rRNA	5.43E-03
53	GO:0043248: proteasome assembly	5.43E-03
54	GO:0045040: protein import into mitochondrial outer membrane	5.43E-03
55	GO:0001731: formation of translation preinitiation complex	5.43E-03
56	GO:0000911: cytokinesis by cell plate formation	6.56E-03
57	GO:0098655: cation transmembrane transport	6.56E-03
58	GO:0000245: spliceosomal complex assembly	6.56E-03
59	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	7.76E-03
60	GO:0032880: regulation of protein localization	7.76E-03
61	GO:0009793: embryo development ending in seed dormancy	8.93E-03
62	GO:0009690: cytokinin metabolic process	9.03E-03
63	GO:0022900: electron transport chain	1.04E-02
64	GO:0009808: lignin metabolic process	1.04E-02
65	GO:0098656: anion transmembrane transport	1.18E-02
66	GO:0048589: developmental growth	1.18E-02
67	GO:0015031: protein transport	1.41E-02
68	GO:0006913: nucleocytoplasmic transport	1.64E-02
69	GO:0010015: root morphogenesis	1.64E-02
70	GO:0006790: sulfur compound metabolic process	1.81E-02
71	GO:0006820: anion transport	1.81E-02
72	GO:0016925: protein sumoylation	1.81E-02
73	GO:0010102: lateral root morphogenesis	1.98E-02
74	GO:0010628: positive regulation of gene expression	1.98E-02
75	GO:0048467: gynoecium development	2.16E-02
76	GO:0009651: response to salt stress	2.22E-02
77	GO:0008283: cell proliferation	2.31E-02
78	GO:0010039: response to iron ion	2.34E-02
79	GO:0009644: response to high light intensity	2.50E-02
80	GO:0009116: nucleoside metabolic process	2.72E-02
81	GO:0030150: protein import into mitochondrial matrix	2.72E-02
82	GO:0006406: mRNA export from nucleus	2.72E-02
83	GO:0006289: nucleotide-excision repair	2.72E-02
84	GO:0003333: amino acid transmembrane transport	3.13E-02
85	GO:0007005: mitochondrion organization	3.33E-02
86	GO:0040007: growth	3.55E-02
87	GO:0019722: calcium-mediated signaling	3.77E-02
88	GO:0010089: xylem development	3.77E-02
89	GO:0015991: ATP hydrolysis coupled proton transport	4.21E-02
90	GO:0000413: protein peptidyl-prolyl isomerization	4.21E-02
91	GO:0006662: glycerol ether metabolic process	4.44E-02
92	GO:0010183: pollen tube guidance	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0003735: structural constituent of ribosome	1.17E-184
2	GO:0003729: mRNA binding	1.51E-31
3	GO:0019843: rRNA binding	5.01E-13
4	GO:0001055: RNA polymerase II activity	6.96E-05
5	GO:0008097: 5S rRNA binding	7.91E-05
6	GO:0001054: RNA polymerase I activity	1.12E-04
7	GO:0001056: RNA polymerase III activity	1.37E-04
8	GO:0031177: phosphopantetheine binding	2.98E-04
9	GO:0000035: acyl binding	3.98E-04
10	GO:1990189: peptide-serine-N-acetyltransferase activity	4.98E-04
11	GO:1990190: peptide-glutamate-N-acetyltransferase activity	4.98E-04
12	GO:0005080: protein kinase C binding	4.98E-04
13	GO:0035614: snRNA stem-loop binding	4.98E-04
14	GO:0003746: translation elongation factor activity	5.03E-04
15	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	6.37E-04
16	GO:0043022: ribosome binding	6.37E-04
17	GO:0015173: aromatic amino acid transmembrane transporter activity	1.07E-03
18	GO:0030619: U1 snRNA binding	1.07E-03
19	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.17E-03
20	GO:0003723: RNA binding	1.21E-03
21	GO:0005047: signal recognition particle binding	1.75E-03
22	GO:0070181: small ribosomal subunit rRNA binding	1.75E-03
23	GO:0070180: large ribosomal subunit rRNA binding	1.75E-03
24	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.26E-03
25	GO:0003999: adenine phosphoribosyltransferase activity	2.54E-03
26	GO:0022890: inorganic cation transmembrane transporter activity	2.54E-03
27	GO:0004550: nucleoside diphosphate kinase activity	2.54E-03
28	GO:0047627: adenylylsulfatase activity	2.54E-03
29	GO:0010011: auxin binding	3.42E-03
30	GO:0005275: amine transmembrane transporter activity	4.38E-03
31	GO:0031386: protein tag	4.38E-03
32	GO:0003743: translation initiation factor activity	5.88E-03
33	GO:0051920: peroxiredoxin activity	6.56E-03
34	GO:0042162: telomeric DNA binding	7.76E-03
35	GO:0008121: ubiquinol-cytochrome-c reductase activity	7.76E-03
36	GO:0015288: porin activity	9.03E-03
37	GO:0016209: antioxidant activity	9.03E-03
38	GO:0008308: voltage-gated anion channel activity	1.04E-02
39	GO:0050897: cobalt ion binding	1.63E-02
40	GO:0004129: cytochrome-c oxidase activity	1.64E-02
41	GO:0008794: arsenate reductase (glutaredoxin) activity	1.64E-02
42	GO:0046961: proton-transporting ATPase activity, rotational mechanism	1.64E-02
43	GO:0044183: protein binding involved in protein folding	1.64E-02
44	GO:0015266: protein channel activity	1.98E-02
45	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.70E-02
46	GO:0047134: protein-disulfide reductase activity	3.99E-02
47	GO:0008080: N-acetyltransferase activity	4.44E-02
48	GO:0015035: protein disulfide oxidoreductase activity	4.55E-02
49	GO:0004791: thioredoxin-disulfide reductase activity	4.68E-02
50	GO:0004872: receptor activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0005675: holo TFIIH complex	0.00E+00
3	GO:0005840: ribosome	2.11E-131
4	GO:0022626: cytosolic ribosome	7.44E-117
5	GO:0022625: cytosolic large ribosomal subunit	1.13E-108
6	GO:0022627: cytosolic small ribosomal subunit	9.49E-79
7	GO:0005730: nucleolus	1.63E-35
8	GO:0005829: cytosol	7.73E-35
9	GO:0005737: cytoplasm	2.57E-34
10	GO:0009506: plasmodesma	4.23E-21
11	GO:0015934: large ribosomal subunit	2.07E-13
12	GO:0005774: vacuolar membrane	1.17E-11
13	GO:0016020: membrane	1.69E-09
14	GO:0015935: small ribosomal subunit	2.71E-08
15	GO:0005732: small nucleolar ribonucleoprotein complex	3.97E-08
16	GO:0005618: cell wall	2.62E-07
17	GO:0005665: DNA-directed RNA polymerase II, core complex	5.34E-06
18	GO:0019013: viral nucleocapsid	7.16E-06
19	GO:0005773: vacuole	9.09E-06
20	GO:0000419: DNA-directed RNA polymerase V complex	1.54E-05
21	GO:0034719: SMN-Sm protein complex	3.70E-05
22	GO:0005853: eukaryotic translation elongation factor 1 complex	3.70E-05
23	GO:0005736: DNA-directed RNA polymerase I complex	5.29E-05
24	GO:0005685: U1 snRNP	5.29E-05
25	GO:0005666: DNA-directed RNA polymerase III complex	6.96E-05
26	GO:0071011: precatalytic spliceosome	6.96E-05
27	GO:0071013: catalytic step 2 spliceosome	1.12E-04
28	GO:0005682: U5 snRNP	1.37E-04
29	GO:0005750: mitochondrial respiratory chain complex III	1.98E-04
30	GO:0097526: spliceosomal tri-snRNP complex	2.11E-04
31	GO:0005687: U4 snRNP	2.11E-04
32	GO:0005681: spliceosomal complex	2.80E-04
33	GO:0009507: chloroplast	3.24E-04
34	GO:0005689: U12-type spliceosomal complex	3.98E-04
35	GO:0072546: ER membrane protein complex	4.98E-04
36	GO:0030686: 90S preribosome	4.98E-04
37	GO:0005742: mitochondrial outer membrane translocase complex	7.77E-04
38	GO:0005886: plasma membrane	9.21E-04
39	GO:0071010: prespliceosome	1.07E-03
40	GO:0035145: exon-exon junction complex	1.07E-03
41	GO:0005697: telomerase holoenzyme complex	1.07E-03
42	GO:0031415: NatA complex	1.07E-03
43	GO:0005686: U2 snRNP	1.27E-03
44	GO:0000418: DNA-directed RNA polymerase IV complex	1.27E-03
45	GO:0000439: core TFIIH complex	1.75E-03
46	GO:0034715: pICln-Sm protein complex	1.75E-03
47	GO:0005753: mitochondrial proton-transporting ATP synthase complex	2.42E-03
48	GO:0033180: proton-transporting V-type ATPase, V1 domain	2.54E-03
49	GO:1990726: Lsm1-7-Pat1 complex	2.54E-03
50	GO:0005758: mitochondrial intermembrane space	3.00E-03
51	GO:0070469: respiratory chain	3.31E-03
52	GO:0005746: mitochondrial respiratory chain	4.38E-03
53	GO:0016282: eukaryotic 43S preinitiation complex	5.43E-03
54	GO:0000243: commitment complex	5.43E-03
55	GO:0000502: proteasome complex	6.19E-03
56	GO:0005762: mitochondrial large ribosomal subunit	6.56E-03
57	GO:0033290: eukaryotic 48S preinitiation complex	6.56E-03
58	GO:0016272: prefoldin complex	6.56E-03
59	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	9.03E-03
60	GO:0005688: U6 snRNP	9.03E-03
61	GO:0071004: U2-type prespliceosome	9.03E-03
62	GO:0045273: respiratory chain complex II	9.03E-03
63	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.04E-02
64	GO:0046930: pore complex	1.04E-02
65	GO:0031901: early endosome membrane	1.18E-02
66	GO:0016604: nuclear body	1.33E-02
67	GO:0015030: Cajal body	1.33E-02
68	GO:0005852: eukaryotic translation initiation factor 3 complex	1.64E-02
69	GO:0008541: proteasome regulatory particle, lid subcomplex	1.64E-02
70	GO:0005622: intracellular	1.77E-02
71	GO:0031307: integral component of mitochondrial outer membrane	1.81E-02
72	GO:0009508: plastid chromosome	1.98E-02
73	GO:0005769: early endosome	2.53E-02
74	GO:0005741: mitochondrial outer membrane	3.13E-02
75	GO:0005747: mitochondrial respiratory chain complex I	3.80E-02