GO Enrichment Analysis of Co-expressed Genes with
AT5G27600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 2 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 3 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 4 | GO:0046686: response to cadmium ion | 3.38E-09 |
| 5 | GO:0006099: tricarboxylic acid cycle | 2.39E-08 |
| 6 | GO:0009058: biosynthetic process | 1.64E-05 |
| 7 | GO:0042964: thioredoxin reduction | 5.48E-05 |
| 8 | GO:0006106: fumarate metabolic process | 5.48E-05 |
| 9 | GO:1990542: mitochondrial transmembrane transport | 5.48E-05 |
| 10 | GO:0009820: alkaloid metabolic process | 5.48E-05 |
| 11 | GO:0010365: positive regulation of ethylene biosynthetic process | 5.48E-05 |
| 12 | GO:0006807: nitrogen compound metabolic process | 8.50E-05 |
| 13 | GO:0034635: glutathione transport | 1.34E-04 |
| 14 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.34E-04 |
| 15 | GO:0019752: carboxylic acid metabolic process | 1.34E-04 |
| 16 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.34E-04 |
| 17 | GO:0042325: regulation of phosphorylation | 1.34E-04 |
| 18 | GO:0008652: cellular amino acid biosynthetic process | 2.28E-04 |
| 19 | GO:0006421: asparaginyl-tRNA aminoacylation | 2.28E-04 |
| 20 | GO:0009413: response to flooding | 3.33E-04 |
| 21 | GO:0051365: cellular response to potassium ion starvation | 4.45E-04 |
| 22 | GO:0009164: nucleoside catabolic process | 5.66E-04 |
| 23 | GO:0006564: L-serine biosynthetic process | 5.66E-04 |
| 24 | GO:0016973: poly(A)+ mRNA export from nucleus | 5.66E-04 |
| 25 | GO:0009228: thiamine biosynthetic process | 6.92E-04 |
| 26 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.92E-04 |
| 27 | GO:0030643: cellular phosphate ion homeostasis | 8.25E-04 |
| 28 | GO:0050829: defense response to Gram-negative bacterium | 9.62E-04 |
| 29 | GO:1900057: positive regulation of leaf senescence | 9.62E-04 |
| 30 | GO:0045454: cell redox homeostasis | 1.09E-03 |
| 31 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.11E-03 |
| 32 | GO:0006102: isocitrate metabolic process | 1.11E-03 |
| 33 | GO:0007186: G-protein coupled receptor signaling pathway | 1.26E-03 |
| 34 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.26E-03 |
| 35 | GO:0019430: removal of superoxide radicals | 1.26E-03 |
| 36 | GO:0009846: pollen germination | 1.32E-03 |
| 37 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.41E-03 |
| 38 | GO:0006098: pentose-phosphate shunt | 1.41E-03 |
| 39 | GO:0046685: response to arsenic-containing substance | 1.41E-03 |
| 40 | GO:2000280: regulation of root development | 1.58E-03 |
| 41 | GO:0055114: oxidation-reduction process | 1.92E-03 |
| 42 | GO:0009682: induced systemic resistance | 1.93E-03 |
| 43 | GO:0006108: malate metabolic process | 2.30E-03 |
| 44 | GO:0006006: glucose metabolic process | 2.30E-03 |
| 45 | GO:0000162: tryptophan biosynthetic process | 2.90E-03 |
| 46 | GO:0040008: regulation of growth | 3.27E-03 |
| 47 | GO:0006874: cellular calcium ion homeostasis | 3.32E-03 |
| 48 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.77E-03 |
| 49 | GO:0080092: regulation of pollen tube growth | 3.77E-03 |
| 50 | GO:0030245: cellulose catabolic process | 3.77E-03 |
| 51 | GO:0009561: megagametogenesis | 4.23E-03 |
| 52 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.30E-03 |
| 53 | GO:0010501: RNA secondary structure unwinding | 4.71E-03 |
| 54 | GO:0006520: cellular amino acid metabolic process | 4.96E-03 |
| 55 | GO:0048868: pollen tube development | 4.96E-03 |
| 56 | GO:0010183: pollen tube guidance | 5.48E-03 |
| 57 | GO:0009860: pollen tube growth | 5.68E-03 |
| 58 | GO:0002229: defense response to oomycetes | 5.74E-03 |
| 59 | GO:0016579: protein deubiquitination | 7.11E-03 |
| 60 | GO:0006979: response to oxidative stress | 7.19E-03 |
| 61 | GO:0010029: regulation of seed germination | 7.69E-03 |
| 62 | GO:0016311: dephosphorylation | 8.60E-03 |
| 63 | GO:0016049: cell growth | 8.60E-03 |
| 64 | GO:0048767: root hair elongation | 9.22E-03 |
| 65 | GO:0009853: photorespiration | 1.05E-02 |
| 66 | GO:0009409: response to cold | 1.05E-02 |
| 67 | GO:0042542: response to hydrogen peroxide | 1.22E-02 |
| 68 | GO:0009926: auxin polar transport | 1.26E-02 |
| 69 | GO:0008643: carbohydrate transport | 1.33E-02 |
| 70 | GO:0009809: lignin biosynthetic process | 1.55E-02 |
| 71 | GO:0009555: pollen development | 1.72E-02 |
| 72 | GO:0006096: glycolytic process | 1.75E-02 |
| 73 | GO:0048316: seed development | 1.79E-02 |
| 74 | GO:0048367: shoot system development | 1.79E-02 |
| 75 | GO:0009620: response to fungus | 1.87E-02 |
| 76 | GO:0009553: embryo sac development | 1.95E-02 |
| 77 | GO:0042545: cell wall modification | 1.95E-02 |
| 78 | GO:0009793: embryo development ending in seed dormancy | 2.06E-02 |
| 79 | GO:0042744: hydrogen peroxide catabolic process | 2.57E-02 |
| 80 | GO:0006413: translational initiation | 2.80E-02 |
| 81 | GO:0010150: leaf senescence | 2.94E-02 |
| 82 | GO:0045490: pectin catabolic process | 2.94E-02 |
| 83 | GO:0007166: cell surface receptor signaling pathway | 3.24E-02 |
| 84 | GO:0009651: response to salt stress | 3.28E-02 |
| 85 | GO:0009617: response to bacterium | 3.34E-02 |
| 86 | GO:0009723: response to ethylene | 4.45E-02 |
| 87 | GO:0046777: protein autophosphorylation | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 2 | GO:0008186: RNA-dependent ATPase activity | 0.00E+00 |
| 3 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 4 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 8.37E-06 |
| 5 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 8.37E-06 |
| 6 | GO:0030170: pyridoxal phosphate binding | 1.83E-05 |
| 7 | GO:0048037: cofactor binding | 5.48E-05 |
| 8 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 5.48E-05 |
| 9 | GO:0004333: fumarate hydratase activity | 5.48E-05 |
| 10 | GO:0010013: N-1-naphthylphthalamic acid binding | 5.48E-05 |
| 11 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 5.48E-05 |
| 12 | GO:0004817: cysteine-tRNA ligase activity | 1.34E-04 |
| 13 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.34E-04 |
| 14 | GO:0019172: glyoxalase III activity | 1.34E-04 |
| 15 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.34E-04 |
| 16 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.34E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.28E-04 |
| 18 | GO:0004816: asparagine-tRNA ligase activity | 2.28E-04 |
| 19 | GO:0004791: thioredoxin-disulfide reductase activity | 3.14E-04 |
| 20 | GO:0019201: nucleotide kinase activity | 3.33E-04 |
| 21 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.33E-04 |
| 22 | GO:0004108: citrate (Si)-synthase activity | 3.33E-04 |
| 23 | GO:0017077: oxidative phosphorylation uncoupler activity | 3.33E-04 |
| 24 | GO:0004930: G-protein coupled receptor activity | 4.45E-04 |
| 25 | GO:0004834: tryptophan synthase activity | 4.45E-04 |
| 26 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 4.45E-04 |
| 27 | GO:0005524: ATP binding | 6.79E-04 |
| 28 | GO:0036402: proteasome-activating ATPase activity | 6.92E-04 |
| 29 | GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 8.25E-04 |
| 30 | GO:0004017: adenylate kinase activity | 8.25E-04 |
| 31 | GO:0004656: procollagen-proline 4-dioxygenase activity | 8.25E-04 |
| 32 | GO:0016831: carboxy-lyase activity | 9.62E-04 |
| 33 | GO:0004033: aldo-keto reductase (NADP) activity | 1.11E-03 |
| 34 | GO:0008135: translation factor activity, RNA binding | 1.26E-03 |
| 35 | GO:0003724: RNA helicase activity | 1.26E-03 |
| 36 | GO:0051287: NAD binding | 1.28E-03 |
| 37 | GO:0004743: pyruvate kinase activity | 1.58E-03 |
| 38 | GO:0030955: potassium ion binding | 1.58E-03 |
| 39 | GO:0016844: strictosidine synthase activity | 1.58E-03 |
| 40 | GO:0004177: aminopeptidase activity | 1.93E-03 |
| 41 | GO:0008026: ATP-dependent helicase activity | 2.12E-03 |
| 42 | GO:0019888: protein phosphatase regulator activity | 2.30E-03 |
| 43 | GO:0005217: intracellular ligand-gated ion channel activity | 2.70E-03 |
| 44 | GO:0017025: TBP-class protein binding | 2.70E-03 |
| 45 | GO:0004970: ionotropic glutamate receptor activity | 2.70E-03 |
| 46 | GO:0031418: L-ascorbic acid binding | 3.11E-03 |
| 47 | GO:0004298: threonine-type endopeptidase activity | 3.54E-03 |
| 48 | GO:0003743: translation initiation factor activity | 3.99E-03 |
| 49 | GO:0008810: cellulase activity | 4.00E-03 |
| 50 | GO:0008514: organic anion transmembrane transporter activity | 4.23E-03 |
| 51 | GO:0047134: protein-disulfide reductase activity | 4.47E-03 |
| 52 | GO:0005507: copper ion binding | 4.56E-03 |
| 53 | GO:0000287: magnesium ion binding | 5.18E-03 |
| 54 | GO:0004601: peroxidase activity | 5.28E-03 |
| 55 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.74E-03 |
| 56 | GO:0016791: phosphatase activity | 6.55E-03 |
| 57 | GO:0016597: amino acid binding | 7.11E-03 |
| 58 | GO:0004004: ATP-dependent RNA helicase activity | 8.29E-03 |
| 59 | GO:0050897: cobalt ion binding | 9.86E-03 |
| 60 | GO:0030145: manganese ion binding | 9.86E-03 |
| 61 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.05E-02 |
| 62 | GO:0003993: acid phosphatase activity | 1.09E-02 |
| 63 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.12E-02 |
| 64 | GO:0050661: NADP binding | 1.15E-02 |
| 65 | GO:0045330: aspartyl esterase activity | 1.67E-02 |
| 66 | GO:0045735: nutrient reservoir activity | 1.75E-02 |
| 67 | GO:0030599: pectinesterase activity | 1.91E-02 |
| 68 | GO:0016746: transferase activity, transferring acyl groups | 2.04E-02 |
| 69 | GO:0004252: serine-type endopeptidase activity | 2.52E-02 |
| 70 | GO:0008565: protein transporter activity | 2.66E-02 |
| 71 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.80E-02 |
| 72 | GO:0046910: pectinesterase inhibitor activity | 2.80E-02 |
| 73 | GO:0016301: kinase activity | 3.44E-02 |
| 74 | GO:0003824: catalytic activity | 3.82E-02 |
| 75 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| 76 | GO:0050660: flavin adenine dinucleotide binding | 4.45E-02 |
| 77 | GO:0008233: peptidase activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0005829: cytosol | 4.58E-07 |
| 3 | GO:0045252: oxoglutarate dehydrogenase complex | 5.48E-05 |
| 4 | GO:0045239: tricarboxylic acid cycle enzyme complex | 5.48E-05 |
| 5 | GO:0005618: cell wall | 1.56E-04 |
| 6 | GO:0009506: plasmodesma | 2.04E-04 |
| 7 | GO:0005759: mitochondrial matrix | 3.43E-04 |
| 8 | GO:0009536: plastid | 3.65E-04 |
| 9 | GO:0031597: cytosolic proteasome complex | 8.25E-04 |
| 10 | GO:0009986: cell surface | 9.62E-04 |
| 11 | GO:0031595: nuclear proteasome complex | 9.62E-04 |
| 12 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.26E-03 |
| 13 | GO:0000502: proteasome complex | 1.42E-03 |
| 14 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.58E-03 |
| 15 | GO:0009505: plant-type cell wall | 1.94E-03 |
| 16 | GO:0031307: integral component of mitochondrial outer membrane | 2.11E-03 |
| 17 | GO:0005774: vacuolar membrane | 2.26E-03 |
| 18 | GO:0005839: proteasome core complex | 3.54E-03 |
| 19 | GO:0071944: cell periphery | 6.27E-03 |
| 20 | GO:0005739: mitochondrion | 7.51E-03 |
| 21 | GO:0009707: chloroplast outer membrane | 8.91E-03 |
| 22 | GO:0005643: nuclear pore | 8.91E-03 |
| 23 | GO:0005886: plasma membrane | 1.61E-02 |
| 24 | GO:0005635: nuclear envelope | 1.63E-02 |
| 25 | GO:0005747: mitochondrial respiratory chain complex I | 1.79E-02 |
| 26 | GO:0005737: cytoplasm | 1.88E-02 |
| 27 | GO:0009543: chloroplast thylakoid lumen | 2.34E-02 |
| 28 | GO:0009570: chloroplast stroma | 2.36E-02 |
| 29 | GO:0005783: endoplasmic reticulum | 2.59E-02 |
| 30 | GO:0005802: trans-Golgi network | 2.76E-02 |
| 31 | GO:0005768: endosome | 3.13E-02 |
| 32 | GO:0048046: apoplast | 3.62E-02 |
| 33 | GO:0031969: chloroplast membrane | 4.68E-02 |