Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G27470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
2GO:0044843: cell cycle G1/S phase transition0.00E+00
3GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
4GO:0009264: deoxyribonucleotide catabolic process0.00E+00
5GO:0046487: glyoxylate metabolic process0.00E+00
6GO:0034394: protein localization to cell surface0.00E+00
7GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
8GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
9GO:0006412: translation2.73E-47
10GO:0042254: ribosome biogenesis6.92E-17
11GO:0006511: ubiquitin-dependent protein catabolic process1.88E-15
12GO:0006626: protein targeting to mitochondrion2.60E-08
13GO:0030163: protein catabolic process5.50E-08
14GO:0000027: ribosomal large subunit assembly9.99E-08
15GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.15E-06
16GO:0048569: post-embryonic animal organ development4.55E-06
17GO:0009735: response to cytokinin1.01E-05
18GO:1902626: assembly of large subunit precursor of preribosome1.62E-05
19GO:0051603: proteolysis involved in cellular protein catabolic process5.19E-05
20GO:0042176: regulation of protein catabolic process1.47E-04
21GO:0001731: formation of translation preinitiation complex1.47E-04
22GO:0030433: ubiquitin-dependent ERAD pathway1.86E-04
23GO:0009955: adaxial/abaxial pattern specification2.00E-04
24GO:0006413: translational initiation2.74E-04
25GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.17E-04
26GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.17E-04
27GO:0032365: intracellular lipid transport3.17E-04
28GO:0006407: rRNA export from nucleus3.17E-04
29GO:1990542: mitochondrial transmembrane transport3.17E-04
30GO:0035266: meristem growth3.17E-04
31GO:0000028: ribosomal small subunit assembly3.28E-04
32GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.86E-04
33GO:0010449: root meristem growth5.72E-04
34GO:0051788: response to misfolded protein6.92E-04
35GO:0015786: UDP-glucose transport6.92E-04
36GO:0006435: threonyl-tRNA aminoacylation6.92E-04
37GO:0045859: regulation of protein kinase activity6.92E-04
38GO:0009156: ribonucleoside monophosphate biosynthetic process6.92E-04
39GO:2000072: regulation of defense response to fungus, incompatible interaction6.92E-04
40GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine6.92E-04
41GO:0006820: anion transport8.79E-04
42GO:0042256: mature ribosome assembly1.12E-03
43GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening1.12E-03
44GO:0016255: attachment of GPI anchor to protein1.12E-03
45GO:0006446: regulation of translational initiation1.12E-03
46GO:0009150: purine ribonucleotide metabolic process1.12E-03
47GO:0015783: GDP-fucose transport1.12E-03
48GO:0010043: response to zinc ion1.16E-03
49GO:0030150: protein import into mitochondrial matrix1.54E-03
50GO:0070301: cellular response to hydrogen peroxide1.61E-03
51GO:0046653: tetrahydrofolate metabolic process1.61E-03
52GO:0006241: CTP biosynthetic process1.61E-03
53GO:0072334: UDP-galactose transmembrane transport1.61E-03
54GO:0009647: skotomorphogenesis1.61E-03
55GO:0006165: nucleoside diphosphate phosphorylation1.61E-03
56GO:0006228: UTP biosynthetic process1.61E-03
57GO:0006164: purine nucleotide biosynthetic process1.61E-03
58GO:0001676: long-chain fatty acid metabolic process1.61E-03
59GO:0046513: ceramide biosynthetic process1.61E-03
60GO:0008283: cell proliferation1.78E-03
61GO:0009965: leaf morphogenesis2.07E-03
62GO:0006183: GTP biosynthetic process2.16E-03
63GO:0010363: regulation of plant-type hypersensitive response2.16E-03
64GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway2.16E-03
65GO:0009165: nucleotide biosynthetic process2.16E-03
66GO:1902183: regulation of shoot apical meristem development2.76E-03
67GO:0010375: stomatal complex patterning2.76E-03
68GO:0019408: dolichol biosynthetic process2.76E-03
69GO:0036065: fucosylation2.76E-03
70GO:0015031: protein transport3.23E-03
71GO:0000470: maturation of LSU-rRNA3.40E-03
72GO:0043248: proteasome assembly3.40E-03
73GO:0045040: protein import into mitochondrial outer membrane3.40E-03
74GO:1901001: negative regulation of response to salt stress4.10E-03
75GO:0009094: L-phenylalanine biosynthetic process4.10E-03
76GO:0006458: 'de novo' protein folding4.10E-03
77GO:0000245: spliceosomal complex assembly4.10E-03
78GO:0009554: megasporogenesis4.10E-03
79GO:0048528: post-embryonic root development4.84E-03
80GO:0000338: protein deneddylation4.84E-03
81GO:0015937: coenzyme A biosynthetic process4.84E-03
82GO:0009396: folic acid-containing compound biosynthetic process4.84E-03
83GO:0009645: response to low light intensity stimulus4.84E-03
84GO:0000398: mRNA splicing, via spliceosome4.91E-03
85GO:0046686: response to cadmium ion5.02E-03
86GO:0031540: regulation of anthocyanin biosynthetic process5.62E-03
87GO:0010208: pollen wall assembly6.44E-03
88GO:0001558: regulation of cell growth6.44E-03
89GO:0010204: defense response signaling pathway, resistance gene-independent6.44E-03
90GO:0030968: endoplasmic reticulum unfolded protein response6.44E-03
91GO:0043562: cellular response to nitrogen levels6.44E-03
92GO:0098656: anion transmembrane transport7.30E-03
93GO:0048507: meristem development7.30E-03
94GO:0006189: 'de novo' IMP biosynthetic process7.30E-03
95GO:0015780: nucleotide-sugar transport7.30E-03
96GO:0035999: tetrahydrofolate interconversion8.21E-03
97GO:0042761: very long-chain fatty acid biosynthetic process8.21E-03
98GO:0007275: multicellular organism development8.28E-03
99GO:0045087: innate immune response9.01E-03
100GO:0010162: seed dormancy process9.15E-03
101GO:0009870: defense response signaling pathway, resistance gene-dependent9.15E-03
102GO:0045036: protein targeting to chloroplast9.15E-03
103GO:0006298: mismatch repair9.15E-03
104GO:0010015: root morphogenesis1.01E-02
105GO:0006913: nucleocytoplasmic transport1.01E-02
106GO:0048229: gametophyte development1.01E-02
107GO:0006414: translational elongation1.10E-02
108GO:0006790: sulfur compound metabolic process1.11E-02
109GO:0006312: mitotic recombination1.11E-02
110GO:2000012: regulation of auxin polar transport1.22E-02
111GO:0010102: lateral root morphogenesis1.22E-02
112GO:0008643: carbohydrate transport1.26E-02
113GO:0048467: gynoecium development1.33E-02
114GO:0009969: xyloglucan biosynthetic process1.44E-02
115GO:0009116: nucleoside metabolic process1.67E-02
116GO:0009944: polarity specification of adaxial/abaxial axis1.67E-02
117GO:0006289: nucleotide-excision repair1.67E-02
118GO:0006487: protein N-linked glycosylation1.67E-02
119GO:0051302: regulation of cell division1.80E-02
120GO:0010073: meristem maintenance1.80E-02
121GO:0061077: chaperone-mediated protein folding1.92E-02
122GO:0006366: transcription from RNA polymerase II promoter1.92E-02
123GO:0007005: mitochondrion organization2.05E-02
124GO:0009553: embryo sac development2.18E-02
125GO:0009294: DNA mediated transformation2.18E-02
126GO:0010584: pollen exine formation2.31E-02
127GO:0051028: mRNA transport2.45E-02
128GO:0009651: response to salt stress2.54E-02
129GO:0008033: tRNA processing2.59E-02
130GO:0000413: protein peptidyl-prolyl isomerization2.59E-02
131GO:0008360: regulation of cell shape2.73E-02
132GO:0010154: fruit development2.73E-02
133GO:0010305: leaf vascular tissue pattern formation2.73E-02
134GO:0042752: regulation of circadian rhythm2.88E-02
135GO:0010183: pollen tube guidance3.02E-02
136GO:0048825: cotyledon development3.02E-02
137GO:0009556: microsporogenesis3.02E-02
138GO:0009793: embryo development ending in seed dormancy3.03E-02
139GO:0009845: seed germination3.04E-02
140GO:0010193: response to ozone3.17E-02
141GO:0006635: fatty acid beta-oxidation3.17E-02
142GO:0016579: protein deubiquitination3.96E-02
143GO:0016126: sterol biosynthetic process4.12E-02
144GO:0042128: nitrate assimilation4.46E-02
145GO:0048573: photoperiodism, flowering4.63E-02
146GO:0009734: auxin-activated signaling pathway4.67E-02
147GO:0016049: cell growth4.80E-02
RankGO TermAdjusted P value
1GO:0030272: 5-formyltetrahydrofolate cyclo-ligase activity0.00E+00
2GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
3GO:0004631: phosphomevalonate kinase activity0.00E+00
4GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity0.00E+00
5GO:0004532: exoribonuclease activity0.00E+00
6GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
7GO:0003735: structural constituent of ribosome2.80E-58
8GO:0004298: threonine-type endopeptidase activity5.22E-13
9GO:0003729: mRNA binding2.00E-12
10GO:0008233: peptidase activity1.84E-08
11GO:0003746: translation elongation factor activity6.16E-07
12GO:0019843: rRNA binding1.33E-06
13GO:0036402: proteasome-activating ATPase activity2.15E-06
14GO:0015288: porin activity9.03E-06
15GO:0008097: 5S rRNA binding3.61E-05
16GO:0003743: translation initiation factor activity6.42E-05
17GO:0017025: TBP-class protein binding8.93E-05
18GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.10E-04
19GO:0031369: translation initiation factor binding1.47E-04
20GO:0000824: inositol tetrakisphosphate 3-kinase activity3.17E-04
21GO:0004679: AMP-activated protein kinase activity3.17E-04
22GO:0047326: inositol tetrakisphosphate 5-kinase activity3.17E-04
23GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity3.17E-04
24GO:0005080: protein kinase C binding3.17E-04
25GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity3.17E-04
26GO:0035614: snRNA stem-loop binding3.17E-04
27GO:0016817: hydrolase activity, acting on acid anhydrides3.17E-04
28GO:0000166: nucleotide binding4.01E-04
29GO:0008308: voltage-gated anion channel activity4.03E-04
30GO:0030234: enzyme regulator activity6.67E-04
31GO:0004594: pantothenate kinase activity6.92E-04
32GO:0032934: sterol binding6.92E-04
33GO:0003923: GPI-anchor transamidase activity6.92E-04
34GO:0004829: threonine-tRNA ligase activity6.92E-04
35GO:0043141: ATP-dependent 5'-3' DNA helicase activity6.92E-04
36GO:0035241: protein-arginine omega-N monomethyltransferase activity6.92E-04
37GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity6.92E-04
38GO:0030619: U1 snRNA binding6.92E-04
39GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity6.92E-04
40GO:0050291: sphingosine N-acyltransferase activity6.92E-04
41GO:0008469: histone-arginine N-methyltransferase activity1.12E-03
42GO:0015462: ATPase-coupled protein transmembrane transporter activity1.12E-03
43GO:0008253: 5'-nucleotidase activity1.12E-03
44GO:0004148: dihydrolipoyl dehydrogenase activity1.12E-03
45GO:0005457: GDP-fucose transmembrane transporter activity1.12E-03
46GO:0016887: ATPase activity1.15E-03
47GO:0017077: oxidative phosphorylation uncoupler activity1.61E-03
48GO:0004749: ribose phosphate diphosphokinase activity1.61E-03
49GO:0005460: UDP-glucose transmembrane transporter activity1.61E-03
50GO:0004550: nucleoside diphosphate kinase activity1.61E-03
51GO:0047627: adenylylsulfatase activity1.61E-03
52GO:0004664: prephenate dehydratase activity2.16E-03
53GO:0070628: proteasome binding2.16E-03
54GO:0047769: arogenate dehydratase activity2.16E-03
55GO:0008514: organic anion transmembrane transporter activity2.42E-03
56GO:0005459: UDP-galactose transmembrane transporter activity2.76E-03
57GO:0045547: dehydrodolichyl diphosphate synthase activity2.76E-03
58GO:0004888: transmembrane signaling receptor activity2.76E-03
59GO:0004040: amidase activity2.76E-03
60GO:0030983: mismatched DNA binding3.40E-03
61GO:0031593: polyubiquitin binding3.40E-03
62GO:0102391: decanoate--CoA ligase activity4.10E-03
63GO:0019887: protein kinase regulator activity4.10E-03
64GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.84E-03
65GO:0005338: nucleotide-sugar transmembrane transporter activity4.84E-03
66GO:0008235: metalloexopeptidase activity4.84E-03
67GO:0004467: long-chain fatty acid-CoA ligase activity4.84E-03
68GO:0030674: protein binding, bridging5.62E-03
69GO:0008135: translation factor activity, RNA binding6.44E-03
70GO:0008417: fucosyltransferase activity7.30E-03
71GO:0000989: transcription factor activity, transcription factor binding7.30E-03
72GO:0044183: protein binding involved in protein folding1.01E-02
73GO:0005524: ATP binding1.15E-02
74GO:0015266: protein channel activity1.22E-02
75GO:0004175: endopeptidase activity1.33E-02
76GO:0004535: poly(A)-specific ribonuclease activity1.33E-02
77GO:0005515: protein binding1.44E-02
78GO:0003723: RNA binding1.49E-02
79GO:0004407: histone deacetylase activity1.67E-02
80GO:0043130: ubiquitin binding1.67E-02
81GO:0001046: core promoter sequence-specific DNA binding1.67E-02
82GO:0003714: transcription corepressor activity1.67E-02
83GO:0051087: chaperone binding1.80E-02
84GO:0005216: ion channel activity1.80E-02
85GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.92E-02
86GO:0010181: FMN binding2.88E-02
87GO:0003684: damaged DNA binding3.64E-02
88GO:0005525: GTP binding3.96E-02
89GO:0016597: amino acid binding3.96E-02
RankGO TermAdjusted P value
1GO:0005832: chaperonin-containing T-complex0.00E+00
2GO:0022626: cytosolic ribosome1.44E-48
3GO:0005829: cytosol1.30E-36
4GO:0022625: cytosolic large ribosomal subunit1.04E-34
5GO:0005840: ribosome2.95E-34
6GO:0000502: proteasome complex3.70E-33
7GO:0022627: cytosolic small ribosomal subunit2.47E-25
8GO:0005737: cytoplasm3.33E-20
9GO:0009506: plasmodesma9.77E-18
10GO:0005730: nucleolus3.63E-16
11GO:0015934: large ribosomal subunit2.49E-13
12GO:0005839: proteasome core complex5.22E-13
13GO:0008541: proteasome regulatory particle, lid subcomplex8.35E-13
14GO:0005774: vacuolar membrane4.69E-12
15GO:0015935: small ribosomal subunit3.13E-09
16GO:0031595: nuclear proteasome complex5.57E-08
17GO:0008540: proteasome regulatory particle, base subcomplex4.16E-07
18GO:0005618: cell wall1.35E-06
19GO:0005773: vacuole1.72E-06
20GO:0031597: cytosolic proteasome complex3.73E-06
21GO:0046930: pore complex1.30E-05
22GO:0019773: proteasome core complex, alpha-subunit complex1.30E-05
23GO:0016020: membrane1.31E-05
24GO:0009507: chloroplast1.44E-05
25GO:0005838: proteasome regulatory particle1.62E-05
26GO:0005853: eukaryotic translation elongation factor 1 complex1.62E-05
27GO:0005852: eukaryotic translation initiation factor 3 complex4.02E-05
28GO:0005886: plasma membrane1.34E-04
29GO:0016282: eukaryotic 43S preinitiation complex1.47E-04
30GO:0005741: mitochondrial outer membrane1.63E-04
31GO:0033290: eukaryotic 48S preinitiation complex2.00E-04
32GO:0031359: integral component of chloroplast outer membrane2.60E-04
33GO:0030686: 90S preribosome3.17E-04
34GO:0032389: MutLalpha complex3.17E-04
35GO:0005712: chiasma3.17E-04
36GO:0005742: mitochondrial outer membrane translocase complex4.03E-04
37GO:0005743: mitochondrial inner membrane4.15E-04
38GO:0046861: glyoxysomal membrane1.12E-03
39GO:0042765: GPI-anchor transamidase complex1.12E-03
40GO:0005758: mitochondrial intermembrane space1.54E-03
41GO:0005744: mitochondrial inner membrane presequence translocase complex2.42E-03
42GO:0000795: synaptonemal complex2.76E-03
43GO:0000813: ESCRT I complex2.76E-03
44GO:0000974: Prp19 complex3.40E-03
45GO:0030529: intracellular ribonucleoprotein complex5.44E-03
46GO:0009514: glyoxysome6.44E-03
47GO:0005777: peroxisome6.98E-03
48GO:0005685: U1 snRNP7.30E-03
49GO:0008180: COP9 signalosome7.30E-03
50GO:0015030: Cajal body8.21E-03
51GO:0071011: precatalytic spliceosome8.21E-03
52GO:0071013: catalytic step 2 spliceosome1.01E-02
53GO:0048471: perinuclear region of cytoplasm1.01E-02
54GO:0019013: viral nucleocapsid1.22E-02
55GO:0005769: early endosome1.56E-02
56GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.61E-02
57GO:0005681: spliceosomal complex1.86E-02
58GO:0005747: mitochondrial respiratory chain complex I1.92E-02
59GO:0005834: heterotrimeric G-protein complex1.99E-02
60GO:0000790: nuclear chromatin2.45E-02
61GO:0009536: plastid2.63E-02
62GO:0016592: mediator complex3.32E-02
63GO:0032580: Golgi cisterna membrane3.64E-02
64GO:0009707: chloroplast outer membrane4.98E-02
65GO:0005643: nuclear pore4.98E-02
<
Gene type



Gene DE type