GO Enrichment Analysis of Co-expressed Genes with
AT5G27390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080127: fruit septum development | 0.00E+00 |
| 2 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 5 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 6 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 7 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 8 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 9 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 10 | GO:0015979: photosynthesis | 1.46E-09 |
| 11 | GO:0018026: peptidyl-lysine monomethylation | 1.89E-06 |
| 12 | GO:0009773: photosynthetic electron transport in photosystem I | 1.37E-05 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 2.56E-05 |
| 14 | GO:0061077: chaperone-mediated protein folding | 6.16E-05 |
| 15 | GO:0042371: vitamin K biosynthetic process | 2.00E-04 |
| 16 | GO:0043686: co-translational protein modification | 2.00E-04 |
| 17 | GO:0046167: glycerol-3-phosphate biosynthetic process | 2.00E-04 |
| 18 | GO:0043007: maintenance of rDNA | 2.00E-04 |
| 19 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.00E-04 |
| 20 | GO:0000476: maturation of 4.5S rRNA | 2.00E-04 |
| 21 | GO:0000967: rRNA 5'-end processing | 2.00E-04 |
| 22 | GO:0009657: plastid organization | 2.04E-04 |
| 23 | GO:0010027: thylakoid membrane organization | 2.94E-04 |
| 24 | GO:0034470: ncRNA processing | 4.48E-04 |
| 25 | GO:0006650: glycerophospholipid metabolic process | 4.48E-04 |
| 26 | GO:0006741: NADP biosynthetic process | 4.48E-04 |
| 27 | GO:0019388: galactose catabolic process | 4.48E-04 |
| 28 | GO:0005977: glycogen metabolic process | 7.29E-04 |
| 29 | GO:0019674: NAD metabolic process | 7.29E-04 |
| 30 | GO:0048281: inflorescence morphogenesis | 7.29E-04 |
| 31 | GO:0046168: glycerol-3-phosphate catabolic process | 7.29E-04 |
| 32 | GO:0006412: translation | 7.80E-04 |
| 33 | GO:0009590: detection of gravity | 1.04E-03 |
| 34 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.04E-03 |
| 35 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.04E-03 |
| 36 | GO:0019363: pyridine nucleotide biosynthetic process | 1.04E-03 |
| 37 | GO:0010239: chloroplast mRNA processing | 1.04E-03 |
| 38 | GO:0006072: glycerol-3-phosphate metabolic process | 1.04E-03 |
| 39 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.04E-03 |
| 40 | GO:0010148: transpiration | 1.04E-03 |
| 41 | GO:0009658: chloroplast organization | 1.16E-03 |
| 42 | GO:0010021: amylopectin biosynthetic process | 1.38E-03 |
| 43 | GO:0006808: regulation of nitrogen utilization | 1.38E-03 |
| 44 | GO:0006109: regulation of carbohydrate metabolic process | 1.38E-03 |
| 45 | GO:0015994: chlorophyll metabolic process | 1.38E-03 |
| 46 | GO:0010236: plastoquinone biosynthetic process | 1.76E-03 |
| 47 | GO:0031365: N-terminal protein amino acid modification | 1.76E-03 |
| 48 | GO:0000304: response to singlet oxygen | 1.76E-03 |
| 49 | GO:0019252: starch biosynthetic process | 1.82E-03 |
| 50 | GO:0042549: photosystem II stabilization | 2.17E-03 |
| 51 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.17E-03 |
| 52 | GO:0042793: transcription from plastid promoter | 2.17E-03 |
| 53 | GO:0010190: cytochrome b6f complex assembly | 2.17E-03 |
| 54 | GO:0003006: developmental process involved in reproduction | 2.17E-03 |
| 55 | GO:0042026: protein refolding | 2.60E-03 |
| 56 | GO:1901259: chloroplast rRNA processing | 2.60E-03 |
| 57 | GO:0042372: phylloquinone biosynthetic process | 2.60E-03 |
| 58 | GO:0006458: 'de novo' protein folding | 2.60E-03 |
| 59 | GO:0010103: stomatal complex morphogenesis | 3.06E-03 |
| 60 | GO:0009772: photosynthetic electron transport in photosystem II | 3.06E-03 |
| 61 | GO:0070370: cellular heat acclimation | 3.06E-03 |
| 62 | GO:0009627: systemic acquired resistance | 3.12E-03 |
| 63 | GO:0006810: transport | 3.43E-03 |
| 64 | GO:0016311: dephosphorylation | 3.47E-03 |
| 65 | GO:0000105: histidine biosynthetic process | 3.55E-03 |
| 66 | GO:0016559: peroxisome fission | 3.55E-03 |
| 67 | GO:0005978: glycogen biosynthetic process | 3.55E-03 |
| 68 | GO:0032544: plastid translation | 4.06E-03 |
| 69 | GO:0017004: cytochrome complex assembly | 4.06E-03 |
| 70 | GO:0001558: regulation of cell growth | 4.06E-03 |
| 71 | GO:0048507: meristem development | 4.60E-03 |
| 72 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.15E-03 |
| 73 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.74E-03 |
| 74 | GO:0042254: ribosome biogenesis | 6.24E-03 |
| 75 | GO:0006415: translational termination | 6.34E-03 |
| 76 | GO:0019684: photosynthesis, light reaction | 6.34E-03 |
| 77 | GO:0009089: lysine biosynthetic process via diaminopimelate | 6.34E-03 |
| 78 | GO:0009073: aromatic amino acid family biosynthetic process | 6.34E-03 |
| 79 | GO:0043085: positive regulation of catalytic activity | 6.34E-03 |
| 80 | GO:0005983: starch catabolic process | 6.96E-03 |
| 81 | GO:0010582: floral meristem determinacy | 6.96E-03 |
| 82 | GO:0006006: glucose metabolic process | 7.61E-03 |
| 83 | GO:0048467: gynoecium development | 8.28E-03 |
| 84 | GO:0010020: chloroplast fission | 8.28E-03 |
| 85 | GO:0010207: photosystem II assembly | 8.28E-03 |
| 86 | GO:0010030: positive regulation of seed germination | 8.97E-03 |
| 87 | GO:0019853: L-ascorbic acid biosynthetic process | 8.97E-03 |
| 88 | GO:0000162: tryptophan biosynthetic process | 9.68E-03 |
| 89 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.04E-02 |
| 90 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.12E-02 |
| 91 | GO:0051302: regulation of cell division | 1.12E-02 |
| 92 | GO:0048511: rhythmic process | 1.19E-02 |
| 93 | GO:0019915: lipid storage | 1.19E-02 |
| 94 | GO:0031408: oxylipin biosynthetic process | 1.19E-02 |
| 95 | GO:0005975: carbohydrate metabolic process | 1.20E-02 |
| 96 | GO:0032259: methylation | 1.25E-02 |
| 97 | GO:0019748: secondary metabolic process | 1.27E-02 |
| 98 | GO:0071369: cellular response to ethylene stimulus | 1.35E-02 |
| 99 | GO:0001944: vasculature development | 1.35E-02 |
| 100 | GO:0006012: galactose metabolic process | 1.35E-02 |
| 101 | GO:0009561: megagametogenesis | 1.43E-02 |
| 102 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.52E-02 |
| 103 | GO:0042631: cellular response to water deprivation | 1.60E-02 |
| 104 | GO:0006662: glycerol ether metabolic process | 1.69E-02 |
| 105 | GO:0042752: regulation of circadian rhythm | 1.78E-02 |
| 106 | GO:0008654: phospholipid biosynthetic process | 1.87E-02 |
| 107 | GO:0002229: defense response to oomycetes | 1.97E-02 |
| 108 | GO:1901657: glycosyl compound metabolic process | 2.16E-02 |
| 109 | GO:0009735: response to cytokinin | 2.43E-02 |
| 110 | GO:0009793: embryo development ending in seed dormancy | 2.46E-02 |
| 111 | GO:0018298: protein-chromophore linkage | 3.09E-02 |
| 112 | GO:0009813: flavonoid biosynthetic process | 3.20E-02 |
| 113 | GO:0010218: response to far red light | 3.31E-02 |
| 114 | GO:0006499: N-terminal protein myristoylation | 3.31E-02 |
| 115 | GO:0009637: response to blue light | 3.65E-02 |
| 116 | GO:0034599: cellular response to oxidative stress | 3.77E-02 |
| 117 | GO:0006631: fatty acid metabolic process | 4.13E-02 |
| 118 | GO:0010114: response to red light | 4.37E-02 |
| 119 | GO:0009965: leaf morphogenesis | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 2 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 3 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 7 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 8 | GO:0005528: FK506 binding | 1.10E-06 |
| 9 | GO:0019843: rRNA binding | 2.66E-06 |
| 10 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.90E-06 |
| 11 | GO:0016279: protein-lysine N-methyltransferase activity | 2.94E-05 |
| 12 | GO:0004033: aldo-keto reductase (NADP) activity | 1.64E-04 |
| 13 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.00E-04 |
| 14 | GO:0042736: NADH kinase activity | 2.00E-04 |
| 15 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 2.00E-04 |
| 16 | GO:0050308: sugar-phosphatase activity | 2.00E-04 |
| 17 | GO:0042586: peptide deformylase activity | 2.00E-04 |
| 18 | GO:0019203: carbohydrate phosphatase activity | 2.00E-04 |
| 19 | GO:0047746: chlorophyllase activity | 4.48E-04 |
| 20 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.48E-04 |
| 21 | GO:0004614: phosphoglucomutase activity | 4.48E-04 |
| 22 | GO:0019156: isoamylase activity | 4.48E-04 |
| 23 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.48E-04 |
| 24 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 7.29E-04 |
| 25 | GO:0017150: tRNA dihydrouridine synthase activity | 7.29E-04 |
| 26 | GO:0005504: fatty acid binding | 7.29E-04 |
| 27 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.04E-03 |
| 28 | GO:0016851: magnesium chelatase activity | 1.04E-03 |
| 29 | GO:0016149: translation release factor activity, codon specific | 1.04E-03 |
| 30 | GO:0042277: peptide binding | 1.38E-03 |
| 31 | GO:0004659: prenyltransferase activity | 1.38E-03 |
| 32 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.38E-03 |
| 33 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.38E-03 |
| 34 | GO:0080032: methyl jasmonate esterase activity | 1.38E-03 |
| 35 | GO:0019199: transmembrane receptor protein kinase activity | 1.38E-03 |
| 36 | GO:0045430: chalcone isomerase activity | 1.38E-03 |
| 37 | GO:0003735: structural constituent of ribosome | 1.96E-03 |
| 38 | GO:2001070: starch binding | 2.17E-03 |
| 39 | GO:0080030: methyl indole-3-acetate esterase activity | 2.17E-03 |
| 40 | GO:0004556: alpha-amylase activity | 2.17E-03 |
| 41 | GO:0003951: NAD+ kinase activity | 4.06E-03 |
| 42 | GO:0003747: translation release factor activity | 4.60E-03 |
| 43 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 4.60E-03 |
| 44 | GO:0008047: enzyme activator activity | 5.74E-03 |
| 45 | GO:0000287: magnesium ion binding | 5.96E-03 |
| 46 | GO:0044183: protein binding involved in protein folding | 6.34E-03 |
| 47 | GO:0004521: endoribonuclease activity | 6.96E-03 |
| 48 | GO:0031072: heat shock protein binding | 7.61E-03 |
| 49 | GO:0004565: beta-galactosidase activity | 7.61E-03 |
| 50 | GO:0016491: oxidoreductase activity | 9.36E-03 |
| 51 | GO:0003887: DNA-directed DNA polymerase activity | 9.68E-03 |
| 52 | GO:0031409: pigment binding | 9.68E-03 |
| 53 | GO:0004857: enzyme inhibitor activity | 1.04E-02 |
| 54 | GO:0051082: unfolded protein binding | 1.14E-02 |
| 55 | GO:0030570: pectate lyase activity | 1.35E-02 |
| 56 | GO:0047134: protein-disulfide reductase activity | 1.52E-02 |
| 57 | GO:0004252: serine-type endopeptidase activity | 1.59E-02 |
| 58 | GO:0004791: thioredoxin-disulfide reductase activity | 1.78E-02 |
| 59 | GO:0048038: quinone binding | 1.97E-02 |
| 60 | GO:0008017: microtubule binding | 2.07E-02 |
| 61 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.16E-02 |
| 62 | GO:0016787: hydrolase activity | 2.16E-02 |
| 63 | GO:0003684: damaged DNA binding | 2.25E-02 |
| 64 | GO:0008483: transaminase activity | 2.35E-02 |
| 65 | GO:0016168: chlorophyll binding | 2.66E-02 |
| 66 | GO:0102483: scopolin beta-glucosidase activity | 2.87E-02 |
| 67 | GO:0008168: methyltransferase activity | 2.95E-02 |
| 68 | GO:0016788: hydrolase activity, acting on ester bonds | 3.13E-02 |
| 69 | GO:0003993: acid phosphatase activity | 3.77E-02 |
| 70 | GO:0008422: beta-glucosidase activity | 3.89E-02 |
| 71 | GO:0004185: serine-type carboxypeptidase activity | 4.37E-02 |
| 72 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.62E-02 |
| 73 | GO:0043621: protein self-association | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.65E-46 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.16E-25 |
| 4 | GO:0009570: chloroplast stroma | 2.48E-17 |
| 5 | GO:0009534: chloroplast thylakoid | 6.81E-16 |
| 6 | GO:0009941: chloroplast envelope | 9.71E-15 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 5.48E-12 |
| 8 | GO:0009579: thylakoid | 7.28E-11 |
| 9 | GO:0009538: photosystem I reaction center | 2.86E-06 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.88E-06 |
| 11 | GO:0005840: ribosome | 1.87E-05 |
| 12 | GO:0030095: chloroplast photosystem II | 2.65E-05 |
| 13 | GO:0031977: thylakoid lumen | 6.93E-05 |
| 14 | GO:0031969: chloroplast membrane | 3.04E-04 |
| 15 | GO:0010287: plastoglobule | 3.33E-04 |
| 16 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.48E-04 |
| 17 | GO:0009508: plastid chromosome | 5.25E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 7.29E-04 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 8.95E-04 |
| 20 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 1.04E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 1.82E-03 |
| 22 | GO:0010319: stromule | 2.50E-03 |
| 23 | GO:0009295: nucleoid | 2.50E-03 |
| 24 | GO:0048046: apoplast | 2.53E-03 |
| 25 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.60E-03 |
| 26 | GO:0055028: cortical microtubule | 5.74E-03 |
| 27 | GO:0030076: light-harvesting complex | 8.97E-03 |
| 28 | GO:0043234: protein complex | 9.68E-03 |
| 29 | GO:0042651: thylakoid membrane | 1.12E-02 |
| 30 | GO:0015935: small ribosomal subunit | 1.19E-02 |
| 31 | GO:0009532: plastid stroma | 1.19E-02 |
| 32 | GO:0009522: photosystem I | 1.78E-02 |
| 33 | GO:0009523: photosystem II | 1.87E-02 |
| 34 | GO:0030529: intracellular ribonucleoprotein complex | 2.55E-02 |
| 35 | GO:0009707: chloroplast outer membrane | 3.09E-02 |