co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G25930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010247: detection of phosphate ion	0.00E+00
2	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
3	GO:0032499: detection of peptidoglycan	0.00E+00
4	GO:2001143: N-methylnicotinate transport	0.00E+00
5	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
6	GO:0090352: regulation of nitrate assimilation	0.00E+00
7	GO:2001142: nicotinate transport	0.00E+00
8	GO:0006468: protein phosphorylation	1.11E-10
9	GO:0042742: defense response to bacterium	2.84E-07
10	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.95E-06
11	GO:0070588: calcium ion transmembrane transport	6.43E-06
12	GO:0010337: regulation of salicylic acid metabolic process	2.21E-05
13	GO:0010555: response to mannitol	3.14E-05
14	GO:2000067: regulation of root morphogenesis	3.14E-05
15	GO:0007186: G-protein coupled receptor signaling pathway	7.06E-05
16	GO:0071366: cellular response to indolebutyric acid stimulus	9.88E-05
17	GO:0080157: regulation of plant-type cell wall organization or biogenesis	9.88E-05
18	GO:0032491: detection of molecule of fungal origin	9.88E-05
19	GO:1900384: regulation of flavonol biosynthetic process	9.88E-05
20	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	9.88E-05
21	GO:0010726: positive regulation of hydrogen peroxide metabolic process	9.88E-05
22	GO:0010113: negative regulation of systemic acquired resistance	9.88E-05
23	GO:0009750: response to fructose	1.48E-04
24	GO:0007166: cell surface receptor signaling pathway	1.54E-04
25	GO:0009617: response to bacterium	1.66E-04
26	GO:0002221: pattern recognition receptor signaling pathway	2.32E-04
27	GO:0046740: transport of virus in host, cell to cell	2.32E-04
28	GO:0071395: cellular response to jasmonic acid stimulus	2.32E-04
29	GO:0010155: regulation of proton transport	2.32E-04
30	GO:0010372: positive regulation of gibberellin biosynthetic process	2.32E-04
31	GO:0035556: intracellular signal transduction	3.25E-04
32	GO:0042344: indole glucosinolate catabolic process	3.86E-04
33	GO:0010447: response to acidic pH	3.86E-04
34	GO:0002679: respiratory burst involved in defense response	5.54E-04
35	GO:0071323: cellular response to chitin	5.54E-04
36	GO:0010071: root meristem specification	5.54E-04
37	GO:0030100: regulation of endocytosis	5.54E-04
38	GO:0009749: response to glucose	7.16E-04
39	GO:0071219: cellular response to molecule of bacterial origin	7.37E-04
40	GO:0080142: regulation of salicylic acid biosynthetic process	7.37E-04
41	GO:0009652: thigmotropism	7.37E-04
42	GO:0002229: defense response to oomycetes	7.65E-04
43	GO:0043484: regulation of RNA splicing	9.32E-04
44	GO:0030041: actin filament polymerization	9.32E-04
45	GO:0045038: protein import into chloroplast thylakoid membrane	9.32E-04
46	GO:0006904: vesicle docking involved in exocytosis	9.73E-04
47	GO:0010942: positive regulation of cell death	1.14E-03
48	GO:0015691: cadmium ion transport	1.14E-03
49	GO:0006751: glutathione catabolic process	1.14E-03
50	GO:0048317: seed morphogenesis	1.14E-03
51	GO:0016049: cell growth	1.33E-03
52	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.36E-03
53	GO:0008219: cell death	1.40E-03
54	GO:0009817: defense response to fungus, incompatible interaction	1.40E-03
55	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.59E-03
56	GO:0010044: response to aluminum ion	1.59E-03
57	GO:0006955: immune response	1.59E-03
58	GO:0071446: cellular response to salicylic acid stimulus	1.59E-03
59	GO:1900150: regulation of defense response to fungus	1.84E-03
60	GO:0006402: mRNA catabolic process	1.84E-03
61	GO:0010078: maintenance of root meristem identity	1.84E-03
62	GO:2000070: regulation of response to water deprivation	1.84E-03
63	GO:0045010: actin nucleation	1.84E-03
64	GO:0010492: maintenance of shoot apical meristem identity	1.84E-03
65	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.84E-03
66	GO:0006887: exocytosis	2.09E-03
67	GO:0009744: response to sucrose	2.27E-03
68	GO:0051865: protein autoubiquitination	2.37E-03
69	GO:0048589: developmental growth	2.37E-03
70	GO:0010200: response to chitin	2.42E-03
71	GO:0046777: protein autophosphorylation	2.53E-03
72	GO:2000280: regulation of root development	2.65E-03
73	GO:0008202: steroid metabolic process	2.65E-03
74	GO:0007064: mitotic sister chromatid cohesion	2.95E-03
75	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.95E-03
76	GO:0052544: defense response by callose deposition in cell wall	3.25E-03
77	GO:0016925: protein sumoylation	3.57E-03
78	GO:0007165: signal transduction	3.73E-03
79	GO:0009737: response to abscisic acid	3.88E-03
80	GO:0050826: response to freezing	3.89E-03
81	GO:0034605: cellular response to heat	4.22E-03
82	GO:0018105: peptidyl-serine phosphorylation	4.44E-03
83	GO:0042343: indole glucosinolate metabolic process	4.57E-03
84	GO:0006979: response to oxidative stress	4.60E-03
85	GO:0016310: phosphorylation	4.96E-03
86	GO:0009863: salicylic acid mediated signaling pathway	5.28E-03
87	GO:0006487: protein N-linked glycosylation	5.28E-03
88	GO:0098542: defense response to other organism	6.03E-03
89	GO:0031348: negative regulation of defense response	6.42E-03
90	GO:0006952: defense response	6.66E-03
91	GO:0009686: gibberellin biosynthetic process	6.82E-03
92	GO:0071215: cellular response to abscisic acid stimulus	6.82E-03
93	GO:0009306: protein secretion	7.23E-03
94	GO:0000271: polysaccharide biosynthetic process	8.07E-03
95	GO:0080022: primary root development	8.07E-03
96	GO:0006606: protein import into nucleus	8.07E-03
97	GO:0042631: cellular response to water deprivation	8.07E-03
98	GO:0009960: endosperm development	8.50E-03
99	GO:0045489: pectin biosynthetic process	8.50E-03
100	GO:0010468: regulation of gene expression	8.86E-03
101	GO:0048544: recognition of pollen	8.94E-03
102	GO:0010183: pollen tube guidance	9.39E-03
103	GO:0031047: gene silencing by RNA	1.03E-02
104	GO:0009630: gravitropism	1.03E-02
105	GO:1901657: glycosyl compound metabolic process	1.08E-02
106	GO:0010286: heat acclimation	1.18E-02
107	GO:0001666: response to hypoxia	1.28E-02
108	GO:0009816: defense response to bacterium, incompatible interaction	1.33E-02
109	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.33E-02
110	GO:0048366: leaf development	1.36E-02
111	GO:0009627: systemic acquired resistance	1.38E-02
112	GO:0048573: photoperiodism, flowering	1.43E-02
113	GO:0048481: plant ovule development	1.54E-02
114	GO:0009813: flavonoid biosynthetic process	1.60E-02
115	GO:0009910: negative regulation of flower development	1.71E-02
116	GO:0045087: innate immune response	1.82E-02
117	GO:0016051: carbohydrate biosynthetic process	1.82E-02
118	GO:0009637: response to blue light	1.82E-02
119	GO:0006897: endocytosis	2.06E-02
120	GO:0051707: response to other organism	2.18E-02
121	GO:0048364: root development	2.21E-02
122	GO:0006855: drug transmembrane transport	2.44E-02
123	GO:0031347: regulation of defense response	2.50E-02
124	GO:0009626: plant-type hypersensitive response	3.18E-02
125	GO:0009620: response to fungus	3.25E-02
126	GO:0046686: response to cadmium ion	3.35E-02
127	GO:0009553: embryo sac development	3.39E-02
128	GO:0009742: brassinosteroid mediated signaling pathway	3.62E-02
129	GO:0009738: abscisic acid-activated signaling pathway	3.63E-02
130	GO:0009611: response to wounding	3.83E-02
131	GO:0009845: seed germination	4.30E-02
132	GO:0016036: cellular response to phosphate starvation	4.86E-02
133	GO:0040008: regulation of growth	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
3	GO:0090416: nicotinate transporter activity	0.00E+00
4	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
5	GO:0016301: kinase activity	3.17E-08
6	GO:0005524: ATP binding	4.96E-08
7	GO:0004674: protein serine/threonine kinase activity	5.32E-08
8	GO:0004672: protein kinase activity	1.41E-06
9	GO:0031683: G-protein beta/gamma-subunit complex binding	1.95E-06
10	GO:0001664: G-protein coupled receptor binding	1.95E-06
11	GO:0005388: calcium-transporting ATPase activity	4.21E-06
12	GO:0005516: calmodulin binding	1.31E-05
13	GO:0015085: calcium ion transmembrane transporter activity	9.88E-05
14	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.08E-04
15	GO:1990585: hydroxyproline O-arabinosyltransferase activity	2.32E-04
16	GO:0035091: phosphatidylinositol binding	2.47E-04
17	GO:0003840: gamma-glutamyltransferase activity	3.86E-04
18	GO:0036374: glutathione hydrolase activity	3.86E-04
19	GO:0004871: signal transducer activity	5.16E-04
20	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	5.54E-04
21	GO:0015086: cadmium ion transmembrane transporter activity	5.54E-04
22	GO:0019789: SUMO transferase activity	5.54E-04
23	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	5.54E-04
24	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.54E-04
25	GO:0008536: Ran GTPase binding	6.24E-04
26	GO:0019199: transmembrane receptor protein kinase activity	7.37E-04
27	GO:0045431: flavonol synthase activity	9.32E-04
28	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.21E-03
29	GO:0004683: calmodulin-dependent protein kinase activity	1.27E-03
30	GO:0004143: diacylglycerol kinase activity	1.59E-03
31	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.59E-03
32	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.59E-03
33	GO:0046982: protein heterodimerization activity	1.73E-03
34	GO:0046872: metal ion binding	1.76E-03
35	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.84E-03
36	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.84E-03
37	GO:0003951: NAD+ kinase activity	2.10E-03
38	GO:0008142: oxysterol binding	2.10E-03
39	GO:0003924: GTPase activity	3.80E-03
40	GO:0008139: nuclear localization sequence binding	3.89E-03
41	GO:0003779: actin binding	4.18E-03
42	GO:0008061: chitin binding	4.57E-03
43	GO:0016758: transferase activity, transferring hexosyl groups	5.24E-03
44	GO:0033612: receptor serine/threonine kinase binding	6.03E-03
45	GO:0035251: UDP-glucosyltransferase activity	6.03E-03
46	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.42E-03
47	GO:0022891: substrate-specific transmembrane transporter activity	6.82E-03
48	GO:0016757: transferase activity, transferring glycosyl groups	8.76E-03
49	GO:0019901: protein kinase binding	9.39E-03
50	GO:0004518: nuclease activity	1.03E-02
51	GO:0003682: chromatin binding	1.22E-02
52	GO:0008375: acetylglucosaminyltransferase activity	1.38E-02
53	GO:0030247: polysaccharide binding	1.43E-02
54	GO:0102483: scopolin beta-glucosidase activity	1.43E-02
55	GO:0005525: GTP binding	1.48E-02
56	GO:0042803: protein homodimerization activity	1.80E-02
57	GO:0008422: beta-glucosidase activity	1.94E-02
58	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.94E-02
59	GO:0005515: protein binding	2.44E-02
60	GO:0004842: ubiquitin-protein transferase activity	2.89E-02
61	GO:0008289: lipid binding	2.94E-02
62	GO:0003729: mRNA binding	3.16E-02
63	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.25E-02
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.25E-02
65	GO:0016874: ligase activity	3.32E-02
66	GO:0022857: transmembrane transporter activity	3.32E-02
67	GO:0015035: protein disulfide oxidoreductase activity	3.54E-02
68	GO:0015144: carbohydrate transmembrane transporter activity	4.62E-02
69	GO:0008565: protein transporter activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0005886: plasma membrane	4.06E-12
3	GO:0070062: extracellular exosome	4.63E-06
4	GO:0016442: RISC complex	9.88E-05
5	GO:0080085: signal recognition particle, chloroplast targeting	2.32E-04
6	GO:0005834: heterotrimeric G-protein complex	4.46E-04
7	GO:0000145: exocyst	8.14E-04
8	GO:0010494: cytoplasmic stress granule	2.37E-03
9	GO:0090404: pollen tube tip	3.25E-03
10	GO:0048471: perinuclear region of cytoplasm	3.25E-03
11	GO:0016021: integral component of membrane	3.37E-03
12	GO:0043231: intracellular membrane-bounded organelle	4.30E-03
13	GO:0043234: protein complex	4.92E-03
14	GO:0005875: microtubule associated complex	4.92E-03
15	GO:0005887: integral component of plasma membrane	5.60E-03
16	GO:0031965: nuclear membrane	9.39E-03
17	GO:0005778: peroxisomal membrane	1.18E-02
18	GO:0000932: P-body	1.28E-02
19	GO:0005788: endoplasmic reticulum lumen	1.33E-02
20	GO:0005768: endosome	1.68E-02
21	GO:0000786: nucleosome	1.76E-02
22	GO:0090406: pollen tube	2.18E-02
23	GO:0031966: mitochondrial membrane	2.57E-02
24	GO:0005635: nuclear envelope	2.83E-02
25	GO:0016607: nuclear speck	3.11E-02
26	GO:0010008: endosome membrane	3.11E-02
27	GO:0009524: phragmoplast	4.22E-02