GO Enrichment Analysis of Co-expressed Genes with
AT5G25780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006458: 'de novo' protein folding | 4.52E-06 |
| 2 | GO:0006407: rRNA export from nucleus | 3.00E-05 |
| 3 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 3.00E-05 |
| 4 | GO:0035266: meristem growth | 3.00E-05 |
| 5 | GO:0006434: seryl-tRNA aminoacylation | 3.00E-05 |
| 6 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.00E-05 |
| 7 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.00E-05 |
| 8 | GO:0061077: chaperone-mediated protein folding | 7.45E-05 |
| 9 | GO:0045859: regulation of protein kinase activity | 7.58E-05 |
| 10 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 7.58E-05 |
| 11 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 7.58E-05 |
| 12 | GO:0045041: protein import into mitochondrial intermembrane space | 7.58E-05 |
| 13 | GO:0048569: post-embryonic animal organ development | 7.58E-05 |
| 14 | GO:0006435: threonyl-tRNA aminoacylation | 7.58E-05 |
| 15 | GO:0007005: mitochondrion organization | 8.26E-05 |
| 16 | GO:0042256: mature ribosome assembly | 1.32E-04 |
| 17 | GO:0051131: chaperone-mediated protein complex assembly | 1.97E-04 |
| 18 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 1.97E-04 |
| 19 | GO:0016554: cytidine to uridine editing | 4.20E-04 |
| 20 | GO:0000741: karyogamy | 4.20E-04 |
| 21 | GO:0000245: spliceosomal complex assembly | 5.02E-04 |
| 22 | GO:0042026: protein refolding | 5.02E-04 |
| 23 | GO:0000028: ribosomal small subunit assembly | 6.76E-04 |
| 24 | GO:0006364: rRNA processing | 6.82E-04 |
| 25 | GO:0043562: cellular response to nitrogen levels | 7.68E-04 |
| 26 | GO:0046686: response to cadmium ion | 8.29E-04 |
| 27 | GO:0007338: single fertilization | 8.63E-04 |
| 28 | GO:0048507: meristem development | 8.63E-04 |
| 29 | GO:0009553: embryo sac development | 9.27E-04 |
| 30 | GO:0010449: root meristem growth | 9.61E-04 |
| 31 | GO:0006298: mismatch repair | 1.06E-03 |
| 32 | GO:0006259: DNA metabolic process | 1.06E-03 |
| 33 | GO:0006412: translation | 1.16E-03 |
| 34 | GO:0006312: mitotic recombination | 1.27E-03 |
| 35 | GO:2000012: regulation of auxin polar transport | 1.38E-03 |
| 36 | GO:0000027: ribosomal large subunit assembly | 1.86E-03 |
| 37 | GO:0010073: meristem maintenance | 1.98E-03 |
| 38 | GO:0008033: tRNA processing | 2.80E-03 |
| 39 | GO:0010305: leaf vascular tissue pattern formation | 2.94E-03 |
| 40 | GO:0010197: polar nucleus fusion | 2.94E-03 |
| 41 | GO:0010154: fruit development | 2.94E-03 |
| 42 | GO:0006635: fatty acid beta-oxidation | 3.40E-03 |
| 43 | GO:0080156: mitochondrial mRNA modification | 3.40E-03 |
| 44 | GO:0009567: double fertilization forming a zygote and endosperm | 3.87E-03 |
| 45 | GO:0016579: protein deubiquitination | 4.20E-03 |
| 46 | GO:0042128: nitrate assimilation | 4.70E-03 |
| 47 | GO:0010311: lateral root formation | 5.41E-03 |
| 48 | GO:0009744: response to sucrose | 7.34E-03 |
| 49 | GO:0009555: pollen development | 7.91E-03 |
| 50 | GO:0000154: rRNA modification | 7.96E-03 |
| 51 | GO:0048316: seed development | 1.04E-02 |
| 52 | GO:0006396: RNA processing | 1.18E-02 |
| 53 | GO:0000398: mRNA splicing, via spliceosome | 1.28E-02 |
| 54 | GO:0009845: seed germination | 1.43E-02 |
| 55 | GO:0009790: embryo development | 1.51E-02 |
| 56 | GO:0006633: fatty acid biosynthetic process | 1.59E-02 |
| 57 | GO:0006413: translational initiation | 1.62E-02 |
| 58 | GO:0009451: RNA modification | 1.73E-02 |
| 59 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.76E-02 |
| 60 | GO:0042254: ribosome biogenesis | 2.36E-02 |
| 61 | GO:0006970: response to osmotic stress | 2.45E-02 |
| 62 | GO:0048366: leaf development | 2.61E-02 |
| 63 | GO:0009408: response to heat | 3.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003729: mRNA binding | 1.04E-05 |
| 2 | GO:0044183: protein binding involved in protein folding | 2.52E-05 |
| 3 | GO:0004828: serine-tRNA ligase activity | 3.00E-05 |
| 4 | GO:0004679: AMP-activated protein kinase activity | 3.00E-05 |
| 5 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 7.58E-05 |
| 6 | GO:0004829: threonine-tRNA ligase activity | 7.58E-05 |
| 7 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 7.58E-05 |
| 8 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 7.58E-05 |
| 9 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 7.58E-05 |
| 10 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 7.58E-05 |
| 11 | GO:0005524: ATP binding | 9.70E-05 |
| 12 | GO:0008469: histone-arginine N-methyltransferase activity | 1.32E-04 |
| 13 | GO:0003735: structural constituent of ribosome | 2.03E-04 |
| 14 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.20E-04 |
| 15 | GO:0030983: mismatched DNA binding | 4.20E-04 |
| 16 | GO:0019887: protein kinase regulator activity | 5.02E-04 |
| 17 | GO:0030515: snoRNA binding | 5.88E-04 |
| 18 | GO:0030674: protein binding, bridging | 6.76E-04 |
| 19 | GO:0003678: DNA helicase activity | 8.63E-04 |
| 20 | GO:0051082: unfolded protein binding | 9.54E-04 |
| 21 | GO:0019843: rRNA binding | 1.18E-03 |
| 22 | GO:0004176: ATP-dependent peptidase activity | 2.11E-03 |
| 23 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.11E-03 |
| 24 | GO:0003723: RNA binding | 2.34E-03 |
| 25 | GO:0010181: FMN binding | 3.09E-03 |
| 26 | GO:0004004: ATP-dependent RNA helicase activity | 4.88E-03 |
| 27 | GO:0008236: serine-type peptidase activity | 5.05E-03 |
| 28 | GO:0050897: cobalt ion binding | 5.78E-03 |
| 29 | GO:0003746: translation elongation factor activity | 6.16E-03 |
| 30 | GO:0003697: single-stranded DNA binding | 6.16E-03 |
| 31 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.74E-03 |
| 32 | GO:0016887: ATPase activity | 6.91E-03 |
| 33 | GO:0000166: nucleotide binding | 7.91E-03 |
| 34 | GO:0005525: GTP binding | 1.30E-02 |
| 35 | GO:0016829: lyase activity | 1.43E-02 |
| 36 | GO:0004252: serine-type endopeptidase activity | 1.46E-02 |
| 37 | GO:0003743: translation initiation factor activity | 1.90E-02 |
| 38 | GO:0008168: methyltransferase activity | 2.26E-02 |
| 39 | GO:0008233: peptidase activity | 2.68E-02 |
| 40 | GO:0003924: GTPase activity | 3.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0005730: nucleolus | 5.21E-08 |
| 3 | GO:0005829: cytosol | 6.50E-08 |
| 4 | GO:0032040: small-subunit processome | 2.99E-05 |
| 5 | GO:0032389: MutLalpha complex | 3.00E-05 |
| 6 | GO:0005712: chiasma | 3.00E-05 |
| 7 | GO:0030686: 90S preribosome | 3.00E-05 |
| 8 | GO:0022626: cytosolic ribosome | 1.23E-04 |
| 9 | GO:0005739: mitochondrion | 3.06E-04 |
| 10 | GO:0000795: synaptonemal complex | 3.42E-04 |
| 11 | GO:0031428: box C/D snoRNP complex | 4.20E-04 |
| 12 | GO:0005618: cell wall | 7.20E-04 |
| 13 | GO:0048471: perinuclear region of cytoplasm | 1.16E-03 |
| 14 | GO:0005759: mitochondrial matrix | 1.47E-03 |
| 15 | GO:0015935: small ribosomal subunit | 2.11E-03 |
| 16 | GO:0022627: cytosolic small ribosomal subunit | 2.11E-03 |
| 17 | GO:0000790: nuclear chromatin | 2.66E-03 |
| 18 | GO:0015934: large ribosomal subunit | 5.78E-03 |
| 19 | GO:0005681: spliceosomal complex | 1.02E-02 |
| 20 | GO:0005747: mitochondrial respiratory chain complex I | 1.04E-02 |
| 21 | GO:0005840: ribosome | 1.69E-02 |
| 22 | GO:0009506: plasmodesma | 2.08E-02 |
| 23 | GO:0046658: anchored component of plasma membrane | 2.08E-02 |
| 24 | GO:0005737: cytoplasm | 2.54E-02 |
| 25 | GO:0022625: cytosolic large ribosomal subunit | 2.81E-02 |
| 26 | GO:0009507: chloroplast | 4.58E-02 |