Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000636: positive regulation of primary miRNA processing0.00E+00
2GO:0010046: response to mycotoxin0.00E+00
3GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome0.00E+00
4GO:0046398: UDP-glucuronate metabolic process0.00E+00
5GO:0052573: UDP-D-galactose metabolic process0.00E+00
6GO:2000630: positive regulation of miRNA metabolic process0.00E+00
7GO:0042353: fucose biosynthetic process0.00E+00
8GO:0007141: male meiosis I0.00E+00
9GO:0070588: calcium ion transmembrane transport4.80E-08
10GO:0030974: thiamine pyrophosphate transport8.61E-05
11GO:0033481: galacturonate biosynthetic process8.61E-05
12GO:0009609: response to symbiotic bacterium8.61E-05
13GO:0051180: vitamin transport8.61E-05
14GO:0031407: oxylipin metabolic process2.04E-04
15GO:0010289: homogalacturonan biosynthetic process2.04E-04
16GO:2000030: regulation of response to red or far red light2.04E-04
17GO:0015893: drug transport2.04E-04
18GO:0009863: salicylic acid mediated signaling pathway2.63E-04
19GO:0006081: cellular aldehyde metabolic process3.42E-04
20GO:0006011: UDP-glucose metabolic process3.42E-04
21GO:0009624: response to nematode4.13E-04
22GO:0015696: ammonium transport4.92E-04
23GO:0030100: regulation of endocytosis4.92E-04
24GO:0009226: nucleotide-sugar biosynthetic process4.92E-04
25GO:0045489: pectin biosynthetic process5.23E-04
26GO:0042991: transcription factor import into nucleus6.55E-04
27GO:1902347: response to strigolactone6.55E-04
28GO:0009694: jasmonic acid metabolic process6.55E-04
29GO:0072488: ammonium transmembrane transport6.55E-04
30GO:0006536: glutamate metabolic process6.55E-04
31GO:0033356: UDP-L-arabinose metabolic process6.55E-04
32GO:0009873: ethylene-activated signaling pathway7.35E-04
33GO:0006665: sphingolipid metabolic process8.29E-04
34GO:0010256: endomembrane system organization1.01E-03
35GO:0048232: male gamete generation1.01E-03
36GO:0009861: jasmonic acid and ethylene-dependent systemic resistance1.20E-03
37GO:0010555: response to mannitol1.20E-03
38GO:0009611: response to wounding1.22E-03
39GO:0006811: ion transport1.29E-03
40GO:1902074: response to salt1.41E-03
41GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.41E-03
42GO:0050829: defense response to Gram-negative bacterium1.41E-03
43GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway1.41E-03
44GO:2000070: regulation of response to water deprivation1.63E-03
45GO:0007155: cell adhesion1.63E-03
46GO:1900150: regulation of defense response to fungus1.63E-03
47GO:0006457: protein folding1.74E-03
48GO:0009827: plant-type cell wall modification1.86E-03
49GO:0098656: anion transmembrane transport2.10E-03
50GO:0046685: response to arsenic-containing substance2.10E-03
51GO:2000280: regulation of root development2.35E-03
52GO:0051026: chiasma assembly2.61E-03
53GO:0019538: protein metabolic process2.61E-03
54GO:0008285: negative regulation of cell proliferation2.87E-03
55GO:0071365: cellular response to auxin stimulus3.15E-03
56GO:0018107: peptidyl-threonine phosphorylation3.43E-03
57GO:0009969: xyloglucan biosynthetic process4.03E-03
58GO:0009225: nucleotide-sugar metabolic process4.03E-03
59GO:0080188: RNA-directed DNA methylation4.03E-03
60GO:2000377: regulation of reactive oxygen species metabolic process4.65E-03
61GO:0061077: chaperone-mediated protein folding5.32E-03
62GO:0009269: response to desiccation5.32E-03
63GO:0031408: oxylipin biosynthetic process5.32E-03
64GO:0009409: response to cold5.44E-03
65GO:0030433: ubiquitin-dependent ERAD pathway5.66E-03
66GO:0031348: negative regulation of defense response5.66E-03
67GO:0007131: reciprocal meiotic recombination5.66E-03
68GO:0010150: leaf senescence6.18E-03
69GO:0007623: circadian rhythm6.18E-03
70GO:0009555: pollen development6.22E-03
71GO:0046686: response to cadmium ion6.73E-03
72GO:0000271: polysaccharide biosynthetic process7.10E-03
73GO:0006814: sodium ion transport7.87E-03
74GO:0000302: response to reactive oxygen species8.66E-03
75GO:0010193: response to ozone8.66E-03
76GO:0006310: DNA recombination9.91E-03
77GO:0006904: vesicle docking involved in exocytosis1.03E-02
78GO:0009615: response to virus1.12E-02
79GO:0048366: leaf development1.13E-02
80GO:0009816: defense response to bacterium, incompatible interaction1.17E-02
81GO:0009627: systemic acquired resistance1.21E-02
82GO:0048573: photoperiodism, flowering1.26E-02
83GO:0030244: cellulose biosynthetic process1.35E-02
84GO:0009834: plant-type secondary cell wall biogenesis1.45E-02
85GO:0010119: regulation of stomatal movement1.50E-02
86GO:0071555: cell wall organization1.52E-02
87GO:0016051: carbohydrate biosynthetic process1.60E-02
88GO:0009751: response to salicylic acid1.73E-02
89GO:0009408: response to heat1.76E-02
90GO:0006839: mitochondrial transport1.76E-02
91GO:0006897: endocytosis1.81E-02
92GO:0048364: root development1.83E-02
93GO:0009753: response to jasmonic acid1.89E-02
94GO:0051707: response to other organism1.92E-02
95GO:0009640: photomorphogenesis1.92E-02
96GO:0006260: DNA replication2.19E-02
97GO:0006812: cation transport2.25E-02
98GO:0042538: hyperosmotic salinity response2.25E-02
99GO:0009736: cytokinin-activated signaling pathway2.37E-02
100GO:0009585: red, far-red light phototransduction2.37E-02
101GO:0006813: potassium ion transport2.37E-02
102GO:0010224: response to UV-B2.43E-02
103GO:0006810: transport2.47E-02
104GO:0048367: shoot system development2.73E-02
105GO:0009620: response to fungus2.85E-02
106GO:0018105: peptidyl-serine phosphorylation3.11E-02
107GO:0009742: brassinosteroid mediated signaling pathway3.17E-02
108GO:0035556: intracellular signal transduction3.29E-02
109GO:0000398: mRNA splicing, via spliceosome3.37E-02
110GO:0009845: seed germination3.78E-02
111GO:0009737: response to abscisic acid3.92E-02
112GO:0006633: fatty acid biosynthetic process4.20E-02
113GO:0006470: protein dephosphorylation4.94E-02
114GO:0007166: cell surface receptor signaling pathway4.94E-02
RankGO TermAdjusted P value
1GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity0.00E+00
2GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity0.00E+00
3GO:0047350: glucuronate-1-phosphate uridylyltransferase activity0.00E+00
4GO:0080123: jasmonate-amino synthetase activity0.00E+00
5GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity0.00E+00
6GO:0070566: adenylyltransferase activity0.00E+00
7GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity0.00E+00
8GO:0033721: aldehyde dehydrogenase (NADP+) activity0.00E+00
9GO:0005388: calcium-transporting ATPase activity3.06E-06
10GO:0090422: thiamine pyrophosphate transporter activity8.61E-05
11GO:0015085: calcium ion transmembrane transporter activity8.61E-05
12GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity8.61E-05
13GO:0016629: 12-oxophytodienoate reductase activity2.04E-04
14GO:0017040: ceramidase activity2.04E-04
15GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity3.42E-04
16GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity3.42E-04
17GO:0005516: calmodulin binding4.42E-04
18GO:0004351: glutamate decarboxylase activity4.92E-04
19GO:0005432: calcium:sodium antiporter activity4.92E-04
20GO:0050378: UDP-glucuronate 4-epimerase activity6.55E-04
21GO:0002020: protease binding8.29E-04
22GO:0009922: fatty acid elongase activity8.29E-04
23GO:0008519: ammonium transmembrane transporter activity1.01E-03
24GO:0004029: aldehyde dehydrogenase (NAD) activity1.01E-03
25GO:0019899: enzyme binding1.41E-03
26GO:0004143: diacylglycerol kinase activity1.41E-03
27GO:0015491: cation:cation antiporter activity1.63E-03
28GO:0003951: NAD+ kinase activity1.86E-03
29GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity2.35E-03
30GO:0031625: ubiquitin protein ligase binding2.80E-03
31GO:0005315: inorganic phosphate transmembrane transporter activity3.43E-03
32GO:0005262: calcium channel activity3.43E-03
33GO:0051082: unfolded protein binding3.59E-03
34GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.34E-03
35GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.34E-03
36GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.34E-03
37GO:0051087: chaperone binding4.98E-03
38GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.66E-03
39GO:0008514: organic anion transmembrane transporter activity6.36E-03
40GO:0008536: Ran GTPase binding7.48E-03
41GO:0010181: FMN binding7.87E-03
42GO:0016413: O-acetyltransferase activity1.08E-02
43GO:0005524: ATP binding1.20E-02
44GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.31E-02
45GO:0003824: catalytic activity1.71E-02
46GO:0043621: protein self-association2.02E-02
47GO:0003779: actin binding2.98E-02
48GO:0016758: transferase activity, transferring hexosyl groups3.50E-02
49GO:0004674: protein serine/threonine kinase activity3.74E-02
50GO:0016301: kinase activity3.83E-02
51GO:0030170: pyridoxal phosphate binding3.85E-02
52GO:0015144: carbohydrate transmembrane transporter activity4.06E-02
53GO:0008565: protein transporter activity4.06E-02
54GO:0030246: carbohydrate binding4.19E-02
55GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.27E-02
56GO:0015297: antiporter activity4.34E-02
57GO:0005351: sugar:proton symporter activity4.42E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane4.84E-05
2GO:0005768: endosome1.10E-04
3GO:0005802: trans-Golgi network4.95E-04
4GO:0032580: Golgi cisterna membrane7.72E-04
5GO:0005794: Golgi apparatus8.60E-04
6GO:0030173: integral component of Golgi membrane1.20E-03
7GO:0016363: nuclear matrix1.20E-03
8GO:0015030: Cajal body2.35E-03
9GO:0005743: mitochondrial inner membrane2.74E-03
10GO:0009506: plasmodesma3.23E-03
11GO:0016021: integral component of membrane4.42E-03
12GO:0005887: integral component of plasma membrane4.43E-03
13GO:0000790: nuclear chromatin6.73E-03
14GO:0000145: exocyst9.07E-03
15GO:0005643: nuclear pore1.35E-02
16GO:0090406: pollen tube1.92E-02
17GO:0043231: intracellular membrane-bounded organelle1.94E-02
18GO:0009536: plastid1.97E-02
19GO:0000139: Golgi membrane2.23E-02
20GO:0005681: spliceosomal complex2.67E-02
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Gene type



Gene DE type