GO Enrichment Analysis of Co-expressed Genes with
AT5G24980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0035269: protein O-linked mannosylation | 0.00E+00 |
| 3 | GO:0006412: translation | 2.20E-11 |
| 4 | GO:0043248: proteasome assembly | 8.25E-10 |
| 5 | GO:0042254: ribosome biogenesis | 7.01E-05 |
| 6 | GO:0045905: positive regulation of translational termination | 3.16E-04 |
| 7 | GO:0045901: positive regulation of translational elongation | 3.16E-04 |
| 8 | GO:0006452: translational frameshifting | 3.16E-04 |
| 9 | GO:0051788: response to misfolded protein | 3.16E-04 |
| 10 | GO:0006406: mRNA export from nucleus | 4.93E-04 |
| 11 | GO:0002181: cytoplasmic translation | 5.20E-04 |
| 12 | GO:0032940: secretion by cell | 5.20E-04 |
| 13 | GO:0008333: endosome to lysosome transport | 5.20E-04 |
| 14 | GO:0009647: skotomorphogenesis | 7.44E-04 |
| 15 | GO:0006168: adenine salvage | 7.44E-04 |
| 16 | GO:0071786: endoplasmic reticulum tubular network organization | 7.44E-04 |
| 17 | GO:0006166: purine ribonucleoside salvage | 7.44E-04 |
| 18 | GO:0042147: retrograde transport, endosome to Golgi | 8.29E-04 |
| 19 | GO:0000413: protein peptidyl-prolyl isomerization | 8.93E-04 |
| 20 | GO:0015031: protein transport | 9.08E-04 |
| 21 | GO:0006621: protein retention in ER lumen | 9.85E-04 |
| 22 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.14E-03 |
| 23 | GO:0007029: endoplasmic reticulum organization | 1.25E-03 |
| 24 | GO:0044209: AMP salvage | 1.25E-03 |
| 25 | GO:0006465: signal peptide processing | 1.25E-03 |
| 26 | GO:0030163: protein catabolic process | 1.33E-03 |
| 27 | GO:0006413: translational initiation | 1.65E-03 |
| 28 | GO:0009955: adaxial/abaxial pattern specification | 1.83E-03 |
| 29 | GO:1901001: negative regulation of response to salt stress | 1.83E-03 |
| 30 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.15E-03 |
| 31 | GO:0048528: post-embryonic root development | 2.15E-03 |
| 32 | GO:0009690: cytokinin metabolic process | 2.49E-03 |
| 33 | GO:0006605: protein targeting | 2.49E-03 |
| 34 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.49E-03 |
| 35 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.49E-03 |
| 36 | GO:0006506: GPI anchor biosynthetic process | 2.49E-03 |
| 37 | GO:0000724: double-strand break repair via homologous recombination | 2.63E-03 |
| 38 | GO:0006367: transcription initiation from RNA polymerase II promoter | 2.85E-03 |
| 39 | GO:0098656: anion transmembrane transport | 3.22E-03 |
| 40 | GO:0046685: response to arsenic-containing substance | 3.22E-03 |
| 41 | GO:0043069: negative regulation of programmed cell death | 4.00E-03 |
| 42 | GO:0016192: vesicle-mediated transport | 4.39E-03 |
| 43 | GO:0016925: protein sumoylation | 4.85E-03 |
| 44 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 4.85E-03 |
| 45 | GO:0006820: anion transport | 4.85E-03 |
| 46 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.92E-03 |
| 47 | GO:0046686: response to cadmium ion | 5.00E-03 |
| 48 | GO:0006626: protein targeting to mitochondrion | 5.30E-03 |
| 49 | GO:0006886: intracellular protein transport | 5.38E-03 |
| 50 | GO:0007034: vacuolar transport | 5.76E-03 |
| 51 | GO:0010167: response to nitrate | 6.23E-03 |
| 52 | GO:0006289: nucleotide-excision repair | 7.22E-03 |
| 53 | GO:0006487: protein N-linked glycosylation | 7.22E-03 |
| 54 | GO:0009116: nucleoside metabolic process | 7.22E-03 |
| 55 | GO:0015992: proton transport | 8.26E-03 |
| 56 | GO:0061077: chaperone-mediated protein folding | 8.26E-03 |
| 57 | GO:0007005: mitochondrion organization | 8.79E-03 |
| 58 | GO:0010089: xylem development | 9.92E-03 |
| 59 | GO:0019722: calcium-mediated signaling | 9.92E-03 |
| 60 | GO:0015991: ATP hydrolysis coupled proton transport | 1.11E-02 |
| 61 | GO:0006662: glycerol ether metabolic process | 1.17E-02 |
| 62 | GO:0048825: cotyledon development | 1.29E-02 |
| 63 | GO:0006623: protein targeting to vacuole | 1.29E-02 |
| 64 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.31E-02 |
| 65 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.36E-02 |
| 66 | GO:0006499: N-terminal protein myristoylation | 2.28E-02 |
| 67 | GO:0006414: translational elongation | 2.32E-02 |
| 68 | GO:0010043: response to zinc ion | 2.36E-02 |
| 69 | GO:0034599: cellular response to oxidative stress | 2.60E-02 |
| 70 | GO:0045454: cell redox homeostasis | 2.70E-02 |
| 71 | GO:0009926: auxin polar transport | 3.01E-02 |
| 72 | GO:0009736: cytokinin-activated signaling pathway | 3.72E-02 |
| 73 | GO:0006486: protein glycosylation | 3.72E-02 |
| 74 | GO:0009742: brassinosteroid mediated signaling pathway | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor | 0.00E+00 |
| 2 | GO:0005212: structural constituent of eye lens | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 8.39E-15 |
| 4 | GO:0003746: translation elongation factor activity | 1.79E-05 |
| 5 | GO:0004298: threonine-type endopeptidase activity | 2.74E-05 |
| 6 | GO:0008233: peptidase activity | 1.03E-04 |
| 7 | GO:0019843: rRNA binding | 1.53E-04 |
| 8 | GO:0045309: protein phosphorylated amino acid binding | 1.73E-04 |
| 9 | GO:0019904: protein domain specific binding | 2.39E-04 |
| 10 | GO:0004582: dolichyl-phosphate beta-D-mannosyltransferase activity | 3.16E-04 |
| 11 | GO:0008805: carbon-monoxide oxygenase activity | 3.16E-04 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.92E-04 |
| 13 | GO:0003999: adenine phosphoribosyltransferase activity | 7.44E-04 |
| 14 | GO:0070628: proteasome binding | 9.85E-04 |
| 15 | GO:0004576: oligosaccharyl transferase activity | 9.85E-04 |
| 16 | GO:0016004: phospholipase activator activity | 9.85E-04 |
| 17 | GO:0046923: ER retention sequence binding | 9.85E-04 |
| 18 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 9.85E-04 |
| 19 | GO:0031386: protein tag | 1.25E-03 |
| 20 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.25E-03 |
| 21 | GO:0031593: polyubiquitin binding | 1.53E-03 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.83E-03 |
| 23 | GO:0051920: peroxiredoxin activity | 1.83E-03 |
| 24 | GO:0008320: protein transmembrane transporter activity | 2.15E-03 |
| 25 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 2.15E-03 |
| 26 | GO:0003743: translation initiation factor activity | 2.20E-03 |
| 27 | GO:0043022: ribosome binding | 2.49E-03 |
| 28 | GO:0015288: porin activity | 2.49E-03 |
| 29 | GO:0016209: antioxidant activity | 2.49E-03 |
| 30 | GO:0008308: voltage-gated anion channel activity | 2.85E-03 |
| 31 | GO:0001055: RNA polymerase II activity | 3.60E-03 |
| 32 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 4.42E-03 |
| 33 | GO:0001054: RNA polymerase I activity | 4.42E-03 |
| 34 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.75E-03 |
| 35 | GO:0001056: RNA polymerase III activity | 4.85E-03 |
| 36 | GO:0003712: transcription cofactor activity | 6.23E-03 |
| 37 | GO:0031418: L-ascorbic acid binding | 7.22E-03 |
| 38 | GO:0043130: ubiquitin binding | 7.22E-03 |
| 39 | GO:0005528: FK506 binding | 7.22E-03 |
| 40 | GO:0047134: protein-disulfide reductase activity | 1.05E-02 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 1.23E-02 |
| 42 | GO:0004872: receptor activity | 1.29E-02 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.49E-02 |
| 44 | GO:0003684: damaged DNA binding | 1.55E-02 |
| 45 | GO:0003729: mRNA binding | 1.65E-02 |
| 46 | GO:0004721: phosphoprotein phosphatase activity | 1.98E-02 |
| 47 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.12E-02 |
| 48 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.51E-02 |
| 49 | GO:0003993: acid phosphatase activity | 2.60E-02 |
| 50 | GO:0005525: GTP binding | 2.62E-02 |
| 51 | GO:0004722: protein serine/threonine phosphatase activity | 2.96E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005674: transcription factor TFIIF complex | 0.00E+00 |
| 2 | GO:0022625: cytosolic large ribosomal subunit | 7.13E-11 |
| 3 | GO:0005840: ribosome | 1.35E-09 |
| 4 | GO:0000502: proteasome complex | 2.33E-09 |
| 5 | GO:0005783: endoplasmic reticulum | 4.93E-06 |
| 6 | GO:0009506: plasmodesma | 5.51E-06 |
| 7 | GO:0008541: proteasome regulatory particle, lid subcomplex | 5.66E-06 |
| 8 | GO:0005774: vacuolar membrane | 6.27E-06 |
| 9 | GO:0022626: cytosolic ribosome | 1.34E-05 |
| 10 | GO:0015934: large ribosomal subunit | 1.48E-05 |
| 11 | GO:0005839: proteasome core complex | 2.74E-05 |
| 12 | GO:0005794: Golgi apparatus | 2.83E-05 |
| 13 | GO:0022627: cytosolic small ribosomal subunit | 4.76E-05 |
| 14 | GO:0005789: endoplasmic reticulum membrane | 6.83E-05 |
| 15 | GO:0005829: cytosol | 1.23E-04 |
| 16 | GO:0009510: plasmodesmatal desmotubule | 1.37E-04 |
| 17 | GO:0031090: organelle membrane | 1.44E-04 |
| 18 | GO:0005773: vacuole | 1.65E-04 |
| 19 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.75E-04 |
| 20 | GO:0033185: dolichol-phosphate-mannose synthase complex | 3.16E-04 |
| 21 | GO:0005750: mitochondrial respiratory chain complex III | 3.55E-04 |
| 22 | GO:0000419: DNA-directed RNA polymerase V complex | 4.45E-04 |
| 23 | GO:0071782: endoplasmic reticulum tubular network | 7.44E-04 |
| 24 | GO:0033180: proton-transporting V-type ATPase, V1 domain | 7.44E-04 |
| 25 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 9.85E-04 |
| 26 | GO:0008250: oligosaccharyltransferase complex | 1.25E-03 |
| 27 | GO:0032580: Golgi cisterna membrane | 1.41E-03 |
| 28 | GO:0005771: multivesicular body | 1.53E-03 |
| 29 | GO:0030904: retromer complex | 1.53E-03 |
| 30 | GO:0005730: nucleolus | 1.59E-03 |
| 31 | GO:0005788: endoplasmic reticulum lumen | 1.77E-03 |
| 32 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 2.15E-03 |
| 33 | GO:0016020: membrane | 2.43E-03 |
| 34 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.49E-03 |
| 35 | GO:0005618: cell wall | 2.76E-03 |
| 36 | GO:0046930: pore complex | 2.85E-03 |
| 37 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.85E-03 |
| 38 | GO:0005736: DNA-directed RNA polymerase I complex | 3.22E-03 |
| 39 | GO:0031902: late endosome membrane | 3.26E-03 |
| 40 | GO:0005666: DNA-directed RNA polymerase III complex | 3.60E-03 |
| 41 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.00E-03 |
| 42 | GO:0005758: mitochondrial intermembrane space | 7.22E-03 |
| 43 | GO:0005732: small nucleolar ribonucleoprotein complex | 7.37E-03 |
| 44 | GO:0005741: mitochondrial outer membrane | 8.26E-03 |
| 45 | GO:0009504: cell plate | 1.29E-02 |
| 46 | GO:0005802: trans-Golgi network | 2.54E-02 |
| 47 | GO:0005737: cytoplasm | 2.64E-02 |
| 48 | GO:0005768: endosome | 2.98E-02 |
| 49 | GO:0005635: nuclear envelope | 3.91E-02 |
| 50 | GO:0005681: spliceosomal complex | 4.19E-02 |