co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G24870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
2	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
3	GO:0006593: ornithine catabolic process	0.00E+00
4	GO:0042430: indole-containing compound metabolic process	0.00E+00
5	GO:0023052: signaling	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
8	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
9	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
10	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
11	GO:0001881: receptor recycling	0.00E+00
12	GO:0055114: oxidation-reduction process	1.59E-05
13	GO:0006097: glyoxylate cycle	2.79E-05
14	GO:0009610: response to symbiotic fungus	7.88E-05
15	GO:0006096: glycolytic process	8.48E-05
16	GO:0006102: isocitrate metabolic process	1.02E-04
17	GO:0061014: positive regulation of mRNA catabolic process	1.46E-04
18	GO:0010265: SCF complex assembly	1.46E-04
19	GO:0019544: arginine catabolic process to glutamate	1.46E-04
20	GO:0019605: butyrate metabolic process	1.46E-04
21	GO:0015798: myo-inositol transport	1.46E-04
22	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.46E-04
23	GO:0006083: acetate metabolic process	1.46E-04
24	GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic	1.46E-04
25	GO:0080144: amino acid homeostasis	1.56E-04
26	GO:0009915: phloem sucrose loading	3.33E-04
27	GO:0006212: uracil catabolic process	3.33E-04
28	GO:0006101: citrate metabolic process	3.33E-04
29	GO:0019483: beta-alanine biosynthetic process	3.33E-04
30	GO:0019752: carboxylic acid metabolic process	3.33E-04
31	GO:1990069: stomatal opening	3.33E-04
32	GO:0008333: endosome to lysosome transport	5.47E-04
33	GO:0051646: mitochondrion localization	5.47E-04
34	GO:0045793: positive regulation of cell size	5.47E-04
35	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	5.47E-04
36	GO:0010587: miRNA catabolic process	7.83E-04
37	GO:0006809: nitric oxide biosynthetic process	7.83E-04
38	GO:0009743: response to carbohydrate	7.83E-04
39	GO:0001676: long-chain fatty acid metabolic process	7.83E-04
40	GO:0032877: positive regulation of DNA endoreduplication	7.83E-04
41	GO:0010154: fruit development	1.03E-03
42	GO:0051781: positive regulation of cell division	1.04E-03
43	GO:0048442: sepal development	1.04E-03
44	GO:0032366: intracellular sterol transport	1.04E-03
45	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.04E-03
46	GO:0006623: protein targeting to vacuole	1.19E-03
47	GO:1902183: regulation of shoot apical meristem development	1.31E-03
48	GO:0009435: NAD biosynthetic process	1.31E-03
49	GO:0009697: salicylic acid biosynthetic process	1.31E-03
50	GO:0098719: sodium ion import across plasma membrane	1.31E-03
51	GO:0006564: L-serine biosynthetic process	1.31E-03
52	GO:0042744: hydrogen peroxide catabolic process	1.57E-03
53	GO:0009635: response to herbicide	1.61E-03
54	GO:0006561: proline biosynthetic process	1.61E-03
55	GO:0009816: defense response to bacterium, incompatible interaction	1.92E-03
56	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.93E-03
57	GO:0006694: steroid biosynthetic process	1.93E-03
58	GO:0010189: vitamin E biosynthetic process	1.93E-03
59	GO:0010044: response to aluminum ion	2.27E-03
60	GO:1900056: negative regulation of leaf senescence	2.27E-03
61	GO:0070370: cellular heat acclimation	2.27E-03
62	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.27E-03
63	GO:0009651: response to salt stress	2.29E-03
64	GO:0009414: response to water deprivation	2.54E-03
65	GO:0006402: mRNA catabolic process	2.63E-03
66	GO:0009642: response to light intensity	2.63E-03
67	GO:0048658: anther wall tapetum development	2.63E-03
68	GO:0031540: regulation of anthocyanin biosynthetic process	2.63E-03
69	GO:0040029: regulation of gene expression, epigenetic	2.63E-03
70	GO:0006972: hyperosmotic response	3.00E-03
71	GO:0015996: chlorophyll catabolic process	3.00E-03
72	GO:0007389: pattern specification process	3.00E-03
73	GO:0043562: cellular response to nitrogen levels	3.00E-03
74	GO:0006099: tricarboxylic acid cycle	3.11E-03
75	GO:0015780: nucleotide-sugar transport	3.40E-03
76	GO:0009821: alkaloid biosynthetic process	3.40E-03
77	GO:0006754: ATP biosynthetic process	3.40E-03
78	GO:0048589: developmental growth	3.40E-03
79	GO:0009060: aerobic respiration	3.40E-03
80	GO:0006631: fatty acid metabolic process	3.53E-03
81	GO:0051453: regulation of intracellular pH	3.81E-03
82	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.81E-03
83	GO:0010192: mucilage biosynthetic process	4.23E-03
84	GO:0048441: petal development	4.23E-03
85	GO:0006032: chitin catabolic process	4.23E-03
86	GO:0048829: root cap development	4.23E-03
87	GO:0006855: drug transmembrane transport	4.46E-03
88	GO:0072593: reactive oxygen species metabolic process	4.67E-03
89	GO:0000272: polysaccharide catabolic process	4.67E-03
90	GO:0016485: protein processing	4.67E-03
91	GO:0008361: regulation of cell size	5.13E-03
92	GO:0002213: defense response to insect	5.13E-03
93	GO:0006094: gluconeogenesis	5.60E-03
94	GO:0010102: lateral root morphogenesis	5.60E-03
95	GO:0006807: nitrogen compound metabolic process	5.60E-03
96	GO:0006006: glucose metabolic process	5.60E-03
97	GO:0009266: response to temperature stimulus	6.09E-03
98	GO:0002237: response to molecule of bacterial origin	6.09E-03
99	GO:0007034: vacuolar transport	6.09E-03
100	GO:0009626: plant-type hypersensitive response	6.48E-03
101	GO:0090351: seedling development	6.59E-03
102	GO:0006071: glycerol metabolic process	7.10E-03
103	GO:0006636: unsaturated fatty acid biosynthetic process	7.10E-03
104	GO:0009751: response to salicylic acid	7.35E-03
105	GO:0009695: jasmonic acid biosynthetic process	8.18E-03
106	GO:0048511: rhythmic process	8.73E-03
107	GO:0031408: oxylipin biosynthetic process	8.73E-03
108	GO:0003333: amino acid transmembrane transport	8.73E-03
109	GO:0015992: proton transport	8.73E-03
110	GO:0016226: iron-sulfur cluster assembly	9.30E-03
111	GO:0035428: hexose transmembrane transport	9.30E-03
112	GO:0001944: vasculature development	9.89E-03
113	GO:0006979: response to oxidative stress	1.04E-02
114	GO:0010584: pollen exine formation	1.05E-02
115	GO:0042147: retrograde transport, endosome to Golgi	1.11E-02
116	GO:0010118: stomatal movement	1.17E-02
117	GO:0015991: ATP hydrolysis coupled proton transport	1.17E-02
118	GO:0042631: cellular response to water deprivation	1.17E-02
119	GO:0080022: primary root development	1.17E-02
120	GO:0034220: ion transmembrane transport	1.17E-02
121	GO:0010051: xylem and phloem pattern formation	1.17E-02
122	GO:0046323: glucose import	1.24E-02
123	GO:0006520: cellular amino acid metabolic process	1.24E-02
124	GO:0010197: polar nucleus fusion	1.24E-02
125	GO:0010150: leaf senescence	1.27E-02
126	GO:0015986: ATP synthesis coupled proton transport	1.30E-02
127	GO:0006814: sodium ion transport	1.30E-02
128	GO:0009749: response to glucose	1.37E-02
129	GO:0009735: response to cytokinin	1.38E-02
130	GO:0010193: response to ozone	1.43E-02
131	GO:0009630: gravitropism	1.50E-02
132	GO:0006914: autophagy	1.64E-02
133	GO:0010286: heat acclimation	1.72E-02
134	GO:0071805: potassium ion transmembrane transport	1.72E-02
135	GO:0000910: cytokinesis	1.79E-02
136	GO:0016126: sterol biosynthetic process	1.86E-02
137	GO:0009615: response to virus	1.86E-02
138	GO:0009826: unidimensional cell growth	1.89E-02
139	GO:0042128: nitrate assimilation	2.01E-02
140	GO:0006950: response to stress	2.09E-02
141	GO:0009817: defense response to fungus, incompatible interaction	2.25E-02
142	GO:0008219: cell death	2.25E-02
143	GO:0009723: response to ethylene	2.28E-02
144	GO:0080167: response to karrikin	2.44E-02
145	GO:0007568: aging	2.49E-02
146	GO:0010119: regulation of stomatal movement	2.49E-02
147	GO:0044550: secondary metabolite biosynthetic process	2.65E-02
148	GO:0045087: innate immune response	2.66E-02
149	GO:0009737: response to abscisic acid	3.17E-02
150	GO:0051707: response to other organism	3.19E-02
151	GO:0008643: carbohydrate transport	3.37E-02
152	GO:0009636: response to toxic substance	3.47E-02
153	GO:0031347: regulation of defense response	3.65E-02
154	GO:0042538: hyperosmotic salinity response	3.75E-02
155	GO:0009664: plant-type cell wall organization	3.75E-02
156	GO:0009753: response to jasmonic acid	3.86E-02
157	GO:0009809: lignin biosynthetic process	3.94E-02
158	GO:0051603: proteolysis involved in cellular protein catabolic process	4.04E-02
159	GO:0009620: response to fungus	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
2	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
3	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
4	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0008734: L-aspartate oxidase activity	0.00E+00
7	GO:0032441: pheophorbide a oxygenase activity	0.00E+00
8	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
9	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
10	GO:0003796: lysozyme activity	0.00E+00
11	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
12	GO:0008752: FMN reductase activity	0.00E+00
13	GO:0016229: steroid dehydrogenase activity	1.46E-04
14	GO:0008940: nitrate reductase activity	1.46E-04
15	GO:0009703: nitrate reductase (NADH) activity	1.46E-04
16	GO:0004347: glucose-6-phosphate isomerase activity	1.46E-04
17	GO:0003987: acetate-CoA ligase activity	1.46E-04
18	GO:0070401: NADP+ binding	1.46E-04
19	GO:0047760: butyrate-CoA ligase activity	1.46E-04
20	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.46E-04
21	GO:0004321: fatty-acyl-CoA synthase activity	1.46E-04
22	GO:0019786: Atg8-specific protease activity	1.46E-04
23	GO:0043546: molybdopterin cofactor binding	1.46E-04
24	GO:0050464: nitrate reductase (NADPH) activity	1.46E-04
25	GO:0004618: phosphoglycerate kinase activity	3.33E-04
26	GO:0004617: phosphoglycerate dehydrogenase activity	3.33E-04
27	GO:0004047: aminomethyltransferase activity	3.33E-04
28	GO:0003994: aconitate hydratase activity	3.33E-04
29	GO:0047517: 1,4-beta-D-xylan synthase activity	3.33E-04
30	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	3.33E-04
31	GO:0004534: 5'-3' exoribonuclease activity	3.33E-04
32	GO:0019779: Atg8 activating enzyme activity	3.33E-04
33	GO:0005366: myo-inositol:proton symporter activity	3.33E-04
34	GO:0008517: folic acid transporter activity	3.33E-04
35	GO:0020037: heme binding	4.36E-04
36	GO:0052692: raffinose alpha-galactosidase activity	5.47E-04
37	GO:0010277: chlorophyllide a oxygenase [overall] activity	5.47E-04
38	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	5.47E-04
39	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.47E-04
40	GO:0004557: alpha-galactosidase activity	5.47E-04
41	GO:0051287: NAD binding	5.69E-04
42	GO:0035198: miRNA binding	7.83E-04
43	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	7.83E-04
44	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	7.83E-04
45	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.83E-04
46	GO:0010011: auxin binding	1.04E-03
47	GO:0008409: 5'-3' exonuclease activity	1.04E-03
48	GO:0019776: Atg8 ligase activity	1.04E-03
49	GO:0004659: prenyltransferase activity	1.04E-03
50	GO:0030151: molybdenum ion binding	1.31E-03
51	GO:0004040: amidase activity	1.31E-03
52	GO:0016208: AMP binding	1.61E-03
53	GO:0102391: decanoate--CoA ligase activity	1.93E-03
54	GO:0016831: carboxy-lyase activity	2.27E-03
55	GO:0005338: nucleotide-sugar transmembrane transporter activity	2.27E-03
56	GO:0004467: long-chain fatty acid-CoA ligase activity	2.27E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	2.63E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	2.63E-03
59	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.63E-03
60	GO:0016207: 4-coumarate-CoA ligase activity	3.40E-03
61	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.40E-03
62	GO:0000989: transcription factor activity, transcription factor binding	3.40E-03
63	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	3.40E-03
64	GO:0004601: peroxidase activity	3.47E-03
65	GO:0016844: strictosidine synthase activity	3.81E-03
66	GO:0004568: chitinase activity	4.23E-03
67	GO:0015386: potassium:proton antiporter activity	4.67E-03
68	GO:0008794: arsenate reductase (glutaredoxin) activity	4.67E-03
69	GO:0008559: xenobiotic-transporting ATPase activity	4.67E-03
70	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.13E-03
71	GO:0004022: alcohol dehydrogenase (NAD) activity	5.60E-03
72	GO:0008266: poly(U) RNA binding	6.09E-03
73	GO:0004722: protein serine/threonine phosphatase activity	6.45E-03
74	GO:0008270: zinc ion binding	7.30E-03
75	GO:0051536: iron-sulfur cluster binding	7.63E-03
76	GO:0004298: threonine-type endopeptidase activity	8.73E-03
77	GO:0004252: serine-type endopeptidase activity	1.02E-02
78	GO:0030170: pyridoxal phosphate binding	1.02E-02
79	GO:0005351: sugar:proton symporter activity	1.24E-02
80	GO:0001085: RNA polymerase II transcription factor binding	1.24E-02
81	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.24E-02
82	GO:0005199: structural constituent of cell wall	1.24E-02
83	GO:0005355: glucose transmembrane transporter activity	1.30E-02
84	GO:0010181: FMN binding	1.30E-02
85	GO:0016887: ATPase activity	1.31E-02
86	GO:0004872: receptor activity	1.37E-02
87	GO:0004197: cysteine-type endopeptidase activity	1.50E-02
88	GO:0005524: ATP binding	1.53E-02
89	GO:0016491: oxidoreductase activity	1.55E-02
90	GO:0015385: sodium:proton antiporter activity	1.57E-02
91	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.61E-02
92	GO:0016597: amino acid binding	1.79E-02
93	GO:0015250: water channel activity	1.86E-02
94	GO:0000287: magnesium ion binding	1.93E-02
95	GO:0016788: hydrolase activity, acting on ester bonds	2.01E-02
96	GO:0030247: polysaccharide binding	2.09E-02
97	GO:0015238: drug transmembrane transporter activity	2.33E-02
98	GO:0008233: peptidase activity	2.40E-02
99	GO:0004222: metalloendopeptidase activity	2.41E-02
100	GO:0005507: copper ion binding	2.42E-02
101	GO:0019825: oxygen binding	2.42E-02
102	GO:0004497: monooxygenase activity	2.44E-02
103	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.49E-02
104	GO:0003993: acid phosphatase activity	2.75E-02
105	GO:0008422: beta-glucosidase activity	2.83E-02
106	GO:0050661: NADP binding	2.92E-02
107	GO:0051539: 4 iron, 4 sulfur cluster binding	2.92E-02
108	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.16E-02
109	GO:0051537: 2 iron, 2 sulfur cluster binding	3.37E-02
110	GO:0005506: iron ion binding	3.68E-02
111	GO:0016298: lipase activity	4.04E-02
112	GO:0005215: transporter activity	4.24E-02
113	GO:0008234: cysteine-type peptidase activity	4.24E-02
114	GO:0015171: amino acid transmembrane transporter activity	4.24E-02
115	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.54E-02
116	GO:0016874: ligase activity	4.85E-02
117	GO:0022857: transmembrane transporter activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005773: vacuole	2.65E-07
2	GO:0010494: cytoplasmic stress granule	1.56E-04
3	GO:0005777: peroxisome	2.02E-04
4	GO:0005774: vacuolar membrane	2.19E-04
5	GO:0005759: mitochondrial matrix	2.57E-04
6	GO:0005618: cell wall	3.23E-04
7	GO:0005886: plasma membrane	3.27E-04
8	GO:0045254: pyruvate dehydrogenase complex	3.33E-04
9	GO:0046861: glyoxysomal membrane	5.47E-04
10	GO:0009530: primary cell wall	5.47E-04
11	GO:0005775: vacuolar lumen	7.83E-04
12	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.04E-03
13	GO:0005844: polysome	1.04E-03
14	GO:0005776: autophagosome	1.04E-03
15	GO:0016020: membrane	1.51E-03
16	GO:0030904: retromer complex	1.61E-03
17	GO:0005771: multivesicular body	1.61E-03
18	GO:0000932: P-body	1.81E-03
19	GO:0000421: autophagosome membrane	2.63E-03
20	GO:0000325: plant-type vacuole	2.72E-03
21	GO:0009514: glyoxysome	3.00E-03
22	GO:0019773: proteasome core complex, alpha-subunit complex	3.00E-03
23	GO:0005783: endoplasmic reticulum	4.06E-03
24	GO:0017119: Golgi transport complex	4.23E-03
25	GO:0000502: proteasome complex	5.15E-03
26	GO:0005764: lysosome	6.09E-03
27	GO:0005750: mitochondrial respiratory chain complex III	6.09E-03
28	GO:0005753: mitochondrial proton-transporting ATP synthase complex	6.59E-03
29	GO:0016021: integral component of membrane	6.83E-03
30	GO:0009506: plasmodesma	7.31E-03
31	GO:0005758: mitochondrial intermembrane space	7.63E-03
32	GO:0005839: proteasome core complex	8.73E-03
33	GO:0005741: mitochondrial outer membrane	8.73E-03
34	GO:0031410: cytoplasmic vesicle	9.30E-03
35	GO:0005615: extracellular space	1.42E-02
36	GO:0005794: Golgi apparatus	1.55E-02
37	GO:0032580: Golgi cisterna membrane	1.64E-02
38	GO:0005576: extracellular region	1.73E-02
39	GO:0005829: cytosol	1.92E-02
40	GO:0005788: endoplasmic reticulum lumen	1.94E-02
41	GO:0005667: transcription factor complex	2.01E-02
42	GO:0009707: chloroplast outer membrane	2.25E-02
43	GO:0031902: late endosome membrane	3.01E-02
44	GO:0090406: pollen tube	3.19E-02
45	GO:0031966: mitochondrial membrane	3.75E-02
46	GO:0010008: endosome membrane	4.54E-02
47	GO:0005747: mitochondrial respiratory chain complex I	4.54E-02
48	GO:0005887: integral component of plasma membrane	4.86E-02