co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G24360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
2	GO:0010046: response to mycotoxin	0.00E+00
3	GO:0009560: embryo sac egg cell differentiation	0.00E+00
4	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
5	GO:0010245: radial microtubular system formation	0.00E+00
6	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
7	GO:0042353: fucose biosynthetic process	0.00E+00
8	GO:0006468: protein phosphorylation	3.42E-07
9	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.50E-05
10	GO:0046777: protein autophosphorylation	3.69E-05
11	GO:0009863: salicylic acid mediated signaling pathway	7.44E-05
12	GO:0010372: positive regulation of gibberellin biosynthetic process	8.78E-05
13	GO:2000030: regulation of response to red or far red light	8.78E-05
14	GO:0006011: UDP-glucose metabolic process	1.52E-04
15	GO:0048544: recognition of pollen	1.74E-04
16	GO:0009226: nucleotide-sugar biosynthetic process	2.25E-04
17	GO:0009558: embryo sac cellularization	2.25E-04
18	GO:0030100: regulation of endocytosis	2.25E-04
19	GO:0009399: nitrogen fixation	2.25E-04
20	GO:0007112: male meiosis cytokinesis	3.05E-04
21	GO:0001709: cell fate determination	3.05E-04
22	GO:0009694: jasmonic acid metabolic process	3.05E-04
23	GO:0010483: pollen tube reception	3.05E-04
24	GO:0006536: glutamate metabolic process	3.05E-04
25	GO:0033356: UDP-L-arabinose metabolic process	3.05E-04
26	GO:0030041: actin filament polymerization	3.89E-04
27	GO:0030308: negative regulation of cell growth	3.89E-04
28	GO:0010256: endomembrane system organization	4.78E-04
29	GO:0048317: seed morphogenesis	4.78E-04
30	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	5.70E-04
31	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	6.66E-04
32	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.66E-04
33	GO:1900150: regulation of defense response to fungus	7.68E-04
34	GO:0006402: mRNA catabolic process	7.68E-04
35	GO:0045010: actin nucleation	7.68E-04
36	GO:0060321: acceptance of pollen	8.71E-04
37	GO:0007338: single fertilization	9.78E-04
38	GO:0046685: response to arsenic-containing substance	9.78E-04
39	GO:0046686: response to cadmium ion	1.12E-03
40	GO:0048829: root cap development	1.20E-03
41	GO:0009742: brassinosteroid mediated signaling pathway	1.21E-03
42	GO:0048229: gametophyte development	1.32E-03
43	GO:0071365: cellular response to auxin stimulus	1.44E-03
44	GO:0034605: cellular response to heat	1.70E-03
45	GO:0070588: calcium ion transmembrane transport	1.84E-03
46	GO:0046854: phosphatidylinositol phosphorylation	1.84E-03
47	GO:0009969: xyloglucan biosynthetic process	1.84E-03
48	GO:2000377: regulation of reactive oxygen species metabolic process	2.12E-03
49	GO:0007166: cell surface receptor signaling pathway	2.22E-03
50	GO:0061077: chaperone-mediated protein folding	2.41E-03
51	GO:0030433: ubiquitin-dependent ERAD pathway	2.56E-03
52	GO:0031348: negative regulation of defense response	2.56E-03
53	GO:0009686: gibberellin biosynthetic process	2.71E-03
54	GO:0009306: protein secretion	2.87E-03
55	GO:0010089: xylem development	2.87E-03
56	GO:0009741: response to brassinosteroid	3.36E-03
57	GO:0009960: endosperm development	3.36E-03
58	GO:0007018: microtubule-based movement	3.53E-03
59	GO:0009791: post-embryonic development	3.70E-03
60	GO:0010193: response to ozone	3.88E-03
61	GO:0031047: gene silencing by RNA	4.06E-03
62	GO:0007267: cell-cell signaling	4.60E-03
63	GO:0000910: cytokinesis	4.80E-03
64	GO:0001666: response to hypoxia	4.99E-03
65	GO:0009816: defense response to bacterium, incompatible interaction	5.18E-03
66	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	5.18E-03
67	GO:0009627: systemic acquired resistance	5.38E-03
68	GO:0048364: root development	5.67E-03
69	GO:0010311: lateral root formation	6.19E-03
70	GO:0006499: N-terminal protein myristoylation	6.40E-03
71	GO:0010119: regulation of stomatal movement	6.61E-03
72	GO:0009637: response to blue light	7.05E-03
73	GO:0006897: endocytosis	7.95E-03
74	GO:0009640: photomorphogenesis	8.41E-03
75	GO:0051707: response to other organism	8.41E-03
76	GO:0009636: response to toxic substance	9.12E-03
77	GO:0009738: abscisic acid-activated signaling pathway	9.32E-03
78	GO:0009555: pollen development	9.64E-03
79	GO:0009611: response to wounding	9.85E-03
80	GO:0009846: pollen germination	9.86E-03
81	GO:0035556: intracellular signal transduction	1.02E-02
82	GO:0009585: red, far-red light phototransduction	1.04E-02
83	GO:0010224: response to UV-B	1.06E-02
84	GO:0016310: phosphorylation	1.07E-02
85	GO:0009620: response to fungus	1.25E-02
86	GO:0009553: embryo sac development	1.30E-02
87	GO:0018105: peptidyl-serine phosphorylation	1.36E-02
88	GO:0000398: mRNA splicing, via spliceosome	1.47E-02
89	GO:0009845: seed germination	1.65E-02
90	GO:0009617: response to bacterium	2.22E-02
91	GO:0009826: unidimensional cell growth	2.60E-02
92	GO:0009860: pollen tube growth	2.82E-02
93	GO:0009723: response to ethylene	2.96E-02
94	GO:0048366: leaf development	3.00E-02
95	GO:0006886: intracellular protein transport	3.62E-02
96	GO:0009408: response to heat	4.11E-02
97	GO:0009737: response to abscisic acid	4.16E-02
98	GO:0006397: mRNA processing	4.24E-02
99	GO:0009753: response to jasmonic acid	4.32E-02
100	GO:0008152: metabolic process	4.41E-02
101	GO:0009873: ethylene-activated signaling pathway	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
2	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
3	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
4	GO:0030621: U4 snRNA binding	0.00E+00
5	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
6	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
7	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
8	GO:0070566: adenylyltransferase activity	0.00E+00
9	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
10	GO:0005524: ATP binding	4.98E-08
11	GO:0004674: protein serine/threonine kinase activity	5.77E-07
12	GO:0016301: kinase activity	1.26E-06
13	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	1.52E-04
14	GO:0004351: glutamate decarboxylase activity	2.25E-04
15	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	2.25E-04
16	GO:0043015: gamma-tubulin binding	3.05E-04
17	GO:0004356: glutamate-ammonia ligase activity	3.89E-04
18	GO:0017070: U6 snRNA binding	3.89E-04
19	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.70E-04
20	GO:0051020: GTPase binding	5.70E-04
21	GO:0019899: enzyme binding	6.66E-04
22	GO:0004143: diacylglycerol kinase activity	6.66E-04
23	GO:0102425: myricetin 3-O-glucosyltransferase activity	6.66E-04
24	GO:0102360: daphnetin 3-O-glucosyltransferase activity	6.66E-04
25	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.68E-04
26	GO:0004430: 1-phosphatidylinositol 4-kinase activity	8.71E-04
27	GO:0003951: NAD+ kinase activity	8.71E-04
28	GO:0003779: actin binding	1.12E-03
29	GO:0019888: protein phosphatase regulator activity	1.57E-03
30	GO:0005388: calcium-transporting ATPase activity	1.57E-03
31	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.82E-03
32	GO:0008017: microtubule binding	2.04E-03
33	GO:0030246: carbohydrate binding	2.04E-03
34	GO:0005516: calmodulin binding	2.35E-03
35	GO:0035251: UDP-glucosyltransferase activity	2.41E-03
36	GO:0005509: calcium ion binding	3.08E-03
37	GO:0008536: Ran GTPase binding	3.36E-03
38	GO:0004518: nuclease activity	4.06E-03
39	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.38E-03
40	GO:0004672: protein kinase activity	5.56E-03
41	GO:0004683: calmodulin-dependent protein kinase activity	5.58E-03
42	GO:0043621: protein self-association	8.88E-03
43	GO:0000166: nucleotide binding	9.64E-03
44	GO:0003777: microtubule motor activity	1.11E-02
45	GO:0031625: ubiquitin protein ligase binding	1.11E-02
46	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.25E-02
47	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.25E-02
48	GO:0051082: unfolded protein binding	1.33E-02
49	GO:0016758: transferase activity, transferring hexosyl groups	1.53E-02
50	GO:0030170: pyridoxal phosphate binding	1.68E-02
51	GO:0008565: protein transporter activity	1.77E-02
52	GO:0008194: UDP-glycosyltransferase activity	2.12E-02
53	GO:0003824: catalytic activity	2.15E-02
54	GO:0004842: ubiquitin-protein transferase activity	2.71E-02
55	GO:0003729: mRNA binding	2.92E-02

Rank	GO Term	Adjusted P value
1	GO:0043680: filiform apparatus	0.00E+00
2	GO:0005886: plasma membrane	6.36E-06
3	GO:0016442: RISC complex	3.50E-05
4	GO:0009506: plasmodesma	1.54E-04
5	GO:0030173: integral component of Golgi membrane	5.70E-04
6	GO:0046540: U4/U6 x U5 tri-snRNP complex	8.71E-04
7	GO:0010494: cytoplasmic stress granule	9.78E-04
8	GO:0048471: perinuclear region of cytoplasm	1.32E-03
9	GO:0000159: protein phosphatase type 2A complex	1.32E-03
10	GO:0009524: phragmoplast	1.50E-03
11	GO:0019013: viral nucleocapsid	1.57E-03
12	GO:0005829: cytosol	2.13E-03
13	GO:0005768: endosome	2.99E-03
14	GO:0030136: clathrin-coated vesicle	3.03E-03
15	GO:0005871: kinesin complex	3.03E-03
16	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.27E-03
17	GO:0000145: exocyst	4.06E-03
18	GO:0032580: Golgi cisterna membrane	4.42E-03
19	GO:0005778: peroxisomal membrane	4.60E-03
20	GO:0016020: membrane	4.79E-03
21	GO:0000932: P-body	4.99E-03
22	GO:0005643: nuclear pore	5.99E-03
23	GO:0043231: intracellular membrane-bounded organelle	5.99E-03
24	GO:0031902: late endosome membrane	7.95E-03
25	GO:0090406: pollen tube	8.41E-03
26	GO:0005635: nuclear envelope	1.09E-02
27	GO:0005681: spliceosomal complex	1.17E-02
28	GO:0016607: nuclear speck	1.19E-02
29	GO:0010008: endosome membrane	1.19E-02
30	GO:0012505: endomembrane system	1.30E-02
31	GO:0016021: integral component of membrane	2.54E-02
32	GO:0005874: microtubule	3.04E-02