GO Enrichment Analysis of Co-expressed Genes with
AT5G23750
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 6 | GO:0000476: maturation of 4.5S rRNA | 3.90E-05 |
| 7 | GO:0009443: pyridoxal 5'-phosphate salvage | 3.90E-05 |
| 8 | GO:0000967: rRNA 5'-end processing | 3.90E-05 |
| 9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 3.90E-05 |
| 10 | GO:1904964: positive regulation of phytol biosynthetic process | 3.90E-05 |
| 11 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.90E-05 |
| 12 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 9.72E-05 |
| 13 | GO:0034755: iron ion transmembrane transport | 9.72E-05 |
| 14 | GO:0009629: response to gravity | 9.72E-05 |
| 15 | GO:0000256: allantoin catabolic process | 9.72E-05 |
| 16 | GO:0034470: ncRNA processing | 9.72E-05 |
| 17 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 9.72E-05 |
| 18 | GO:0010136: ureide catabolic process | 1.68E-04 |
| 19 | GO:0006145: purine nucleobase catabolic process | 2.48E-04 |
| 20 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.48E-04 |
| 21 | GO:2001141: regulation of RNA biosynthetic process | 2.48E-04 |
| 22 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.48E-04 |
| 23 | GO:0006021: inositol biosynthetic process | 3.33E-04 |
| 24 | GO:0046855: inositol phosphate dephosphorylation | 5.22E-04 |
| 25 | GO:0006655: phosphatidylglycerol biosynthetic process | 5.22E-04 |
| 26 | GO:0042549: photosystem II stabilization | 5.22E-04 |
| 27 | GO:0031540: regulation of anthocyanin biosynthetic process | 8.37E-04 |
| 28 | GO:0017004: cytochrome complex assembly | 9.50E-04 |
| 29 | GO:0071482: cellular response to light stimulus | 9.50E-04 |
| 30 | GO:0006754: ATP biosynthetic process | 1.07E-03 |
| 31 | GO:0006879: cellular iron ion homeostasis | 1.44E-03 |
| 32 | GO:0006352: DNA-templated transcription, initiation | 1.44E-03 |
| 33 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.58E-03 |
| 34 | GO:0006790: sulfur compound metabolic process | 1.58E-03 |
| 35 | GO:0010207: photosystem II assembly | 1.86E-03 |
| 36 | GO:0019853: L-ascorbic acid biosynthetic process | 2.01E-03 |
| 37 | GO:0046854: phosphatidylinositol phosphorylation | 2.01E-03 |
| 38 | GO:0006863: purine nucleobase transport | 2.16E-03 |
| 39 | GO:0006418: tRNA aminoacylation for protein translation | 2.48E-03 |
| 40 | GO:0000413: protein peptidyl-prolyl isomerization | 3.50E-03 |
| 41 | GO:0015979: photosynthesis | 4.82E-03 |
| 42 | GO:0042128: nitrate assimilation | 5.91E-03 |
| 43 | GO:0016311: dephosphorylation | 6.35E-03 |
| 44 | GO:0009817: defense response to fungus, incompatible interaction | 6.58E-03 |
| 45 | GO:0048481: plant ovule development | 6.58E-03 |
| 46 | GO:0018298: protein-chromophore linkage | 6.58E-03 |
| 47 | GO:0006810: transport | 6.62E-03 |
| 48 | GO:0009813: flavonoid biosynthetic process | 6.80E-03 |
| 49 | GO:0009637: response to blue light | 7.75E-03 |
| 50 | GO:0010114: response to red light | 9.25E-03 |
| 51 | GO:0009926: auxin polar transport | 9.25E-03 |
| 52 | GO:0006855: drug transmembrane transport | 1.03E-02 |
| 53 | GO:0010224: response to UV-B | 1.17E-02 |
| 54 | GO:0009793: embryo development ending in seed dormancy | 1.18E-02 |
| 55 | GO:0006413: translational initiation | 2.05E-02 |
| 56 | GO:0009658: chloroplast organization | 2.94E-02 |
| 57 | GO:0080167: response to karrikin | 3.43E-02 |
| 58 | GO:0045454: cell redox homeostasis | 3.90E-02 |
| 59 | GO:0032259: methylation | 4.39E-02 |
| 60 | GO:0055114: oxidation-reduction process | 4.41E-02 |
| 61 | GO:0016042: lipid catabolic process | 4.43E-02 |
| 62 | GO:0009753: response to jasmonic acid | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 3 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0004830: tryptophan-tRNA ligase activity | 3.90E-05 |
| 8 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.90E-05 |
| 9 | GO:0008934: inositol monophosphate 1-phosphatase activity | 9.72E-05 |
| 10 | GO:0052833: inositol monophosphate 4-phosphatase activity | 9.72E-05 |
| 11 | GO:0052832: inositol monophosphate 3-phosphatase activity | 9.72E-05 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.68E-04 |
| 13 | GO:0004751: ribose-5-phosphate isomerase activity | 1.68E-04 |
| 14 | GO:0070402: NADPH binding | 1.68E-04 |
| 15 | GO:0016987: sigma factor activity | 3.33E-04 |
| 16 | GO:0043495: protein anchor | 3.33E-04 |
| 17 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 3.33E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 3.33E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.33E-04 |
| 20 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.22E-04 |
| 21 | GO:0019899: enzyme binding | 7.28E-04 |
| 22 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.17E-04 |
| 23 | GO:0004033: aldo-keto reductase (NADP) activity | 8.37E-04 |
| 24 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.07E-03 |
| 25 | GO:0005381: iron ion transmembrane transporter activity | 1.19E-03 |
| 26 | GO:0005528: FK506 binding | 2.32E-03 |
| 27 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.48E-03 |
| 28 | GO:0043424: protein histidine kinase binding | 2.48E-03 |
| 29 | GO:0022891: substrate-specific transmembrane transporter activity | 2.97E-03 |
| 30 | GO:0004812: aminoacyl-tRNA ligase activity | 3.32E-03 |
| 31 | GO:0048038: quinone binding | 4.26E-03 |
| 32 | GO:0005215: transporter activity | 4.62E-03 |
| 33 | GO:0016168: chlorophyll binding | 5.69E-03 |
| 34 | GO:0015238: drug transmembrane transporter activity | 6.80E-03 |
| 35 | GO:0050897: cobalt ion binding | 7.27E-03 |
| 36 | GO:0004364: glutathione transferase activity | 8.99E-03 |
| 37 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.77E-03 |
| 38 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.14E-02 |
| 39 | GO:0031625: ubiquitin protein ligase binding | 1.23E-02 |
| 40 | GO:0016746: transferase activity, transferring acyl groups | 1.49E-02 |
| 41 | GO:0015297: antiporter activity | 2.09E-02 |
| 42 | GO:0003743: translation initiation factor activity | 2.41E-02 |
| 43 | GO:0042802: identical protein binding | 2.56E-02 |
| 44 | GO:0008168: methyltransferase activity | 2.86E-02 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 2.98E-02 |
| 46 | GO:0050660: flavin adenine dinucleotide binding | 3.27E-02 |
| 47 | GO:0061630: ubiquitin protein ligase activity | 3.56E-02 |
| 48 | GO:0052689: carboxylic ester hydrolase activity | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.05E-15 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.02E-09 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 5.88E-06 |
| 4 | GO:0031977: thylakoid lumen | 3.25E-05 |
| 5 | GO:0009534: chloroplast thylakoid | 3.26E-05 |
| 6 | GO:0009523: photosystem II | 2.16E-04 |
| 7 | GO:0009533: chloroplast stromal thylakoid | 7.28E-04 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-03 |
| 9 | GO:0009508: plastid chromosome | 1.72E-03 |
| 10 | GO:0009941: chloroplast envelope | 1.76E-03 |
| 11 | GO:0009579: thylakoid | 2.09E-03 |
| 12 | GO:0042651: thylakoid membrane | 2.48E-03 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 2.48E-03 |
| 14 | GO:0019898: extrinsic component of membrane | 4.06E-03 |
| 15 | GO:0009295: nucleoid | 5.05E-03 |
| 16 | GO:0009570: chloroplast stroma | 1.21E-02 |
| 17 | GO:0005747: mitochondrial respiratory chain complex I | 1.31E-02 |
| 18 | GO:0005759: mitochondrial matrix | 2.02E-02 |
| 19 | GO:0009705: plant-type vacuole membrane | 2.16E-02 |
| 20 | GO:0031969: chloroplast membrane | 3.43E-02 |