co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G23360

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010412: mannan metabolic process	0.00E+00
2	GO:1905177: tracheary element differentiation	0.00E+00
3	GO:0009631: cold acclimation	2.37E-05
4	GO:0035435: phosphate ion transmembrane transport	4.99E-05
5	GO:0009819: drought recovery	1.20E-04
6	GO:0009609: response to symbiotic bacterium	1.62E-04
7	GO:1902265: abscisic acid homeostasis	1.62E-04
8	GO:0015709: thiosulfate transport	3.69E-04
9	GO:0071422: succinate transmembrane transport	3.69E-04
10	GO:1901679: nucleotide transmembrane transport	3.69E-04
11	GO:0009873: ethylene-activated signaling pathway	5.78E-04
12	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	6.04E-04
13	GO:0080121: AMP transport	6.04E-04
14	GO:0044210: 'de novo' CTP biosynthetic process	6.04E-04
15	GO:0010623: programmed cell death involved in cell development	6.04E-04
16	GO:0010371: regulation of gibberellin biosynthetic process	8.63E-04
17	GO:1901000: regulation of response to salt stress	8.63E-04
18	GO:0015729: oxaloacetate transport	8.63E-04
19	GO:0030100: regulation of endocytosis	8.63E-04
20	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.83E-04
21	GO:0001944: vasculature development	8.83E-04
22	GO:0070417: cellular response to cold	1.03E-03
23	GO:0042631: cellular response to water deprivation	1.11E-03
24	GO:0009687: abscisic acid metabolic process	1.14E-03
25	GO:0046345: abscisic acid catabolic process	1.14E-03
26	GO:0046355: mannan catabolic process	1.14E-03
27	GO:0022622: root system development	1.14E-03
28	GO:0006552: leucine catabolic process	1.14E-03
29	GO:0010508: positive regulation of autophagy	1.14E-03
30	GO:0015867: ATP transport	1.14E-03
31	GO:0071585: detoxification of cadmium ion	1.14E-03
32	GO:0042991: transcription factor import into nucleus	1.14E-03
33	GO:0009737: response to abscisic acid	1.19E-03
34	GO:0006461: protein complex assembly	1.45E-03
35	GO:0071423: malate transmembrane transport	1.45E-03
36	GO:0009823: cytokinin catabolic process	1.45E-03
37	GO:0006656: phosphatidylcholine biosynthetic process	1.45E-03
38	GO:0000302: response to reactive oxygen species	1.47E-03
39	GO:0009409: response to cold	1.63E-03
40	GO:0019760: glucosinolate metabolic process	1.77E-03
41	GO:0009828: plant-type cell wall loosening	1.77E-03
42	GO:0015866: ADP transport	1.78E-03
43	GO:0047484: regulation of response to osmotic stress	1.78E-03
44	GO:1900425: negative regulation of defense response to bacterium	1.78E-03
45	GO:0006574: valine catabolic process	1.78E-03
46	GO:0010555: response to mannitol	2.14E-03
47	GO:0009955: adaxial/abaxial pattern specification	2.14E-03
48	GO:0071470: cellular response to osmotic stress	2.14E-03
49	GO:0045926: negative regulation of growth	2.14E-03
50	GO:0009082: branched-chain amino acid biosynthetic process	2.14E-03
51	GO:0098655: cation transmembrane transport	2.14E-03
52	GO:0045490: pectin catabolic process	2.42E-03
53	GO:0010103: stomatal complex morphogenesis	2.52E-03
54	GO:0032880: regulation of protein localization	2.52E-03
55	GO:0008272: sulfate transport	2.52E-03
56	GO:0050829: defense response to Gram-negative bacterium	2.52E-03
57	GO:1902074: response to salt	2.52E-03
58	GO:0048767: root hair elongation	2.87E-03
59	GO:0035265: organ growth	2.91E-03
60	GO:0009690: cytokinin metabolic process	2.91E-03
61	GO:0009704: de-etiolation	2.91E-03
62	GO:0009414: response to water deprivation	3.32E-03
63	GO:0016051: carbohydrate biosynthetic process	3.46E-03
64	GO:0098656: anion transmembrane transport	3.77E-03
65	GO:0006098: pentose-phosphate shunt	3.77E-03
66	GO:0006839: mitochondrial transport	3.93E-03
67	GO:0006631: fatty acid metabolic process	4.10E-03
68	GO:0042761: very long-chain fatty acid biosynthetic process	4.22E-03
69	GO:2000280: regulation of root development	4.22E-03
70	GO:0008283: cell proliferation	4.45E-03
71	GO:0009641: shade avoidance	4.69E-03
72	GO:0006949: syncytium formation	4.69E-03
73	GO:0000038: very long-chain fatty acid metabolic process	5.19E-03
74	GO:0009664: plant-type cell wall organization	5.58E-03
75	GO:0042538: hyperosmotic salinity response	5.58E-03
76	GO:0016024: CDP-diacylglycerol biosynthetic process	5.69E-03
77	GO:0045037: protein import into chloroplast stroma	5.69E-03
78	GO:0010200: response to chitin	5.78E-03
79	GO:0050826: response to freezing	6.22E-03
80	GO:0018107: peptidyl-threonine phosphorylation	6.22E-03
81	GO:2000012: regulation of auxin polar transport	6.22E-03
82	GO:0030048: actin filament-based movement	6.22E-03
83	GO:0010143: cutin biosynthetic process	6.76E-03
84	GO:0006351: transcription, DNA-templated	6.78E-03
85	GO:0043086: negative regulation of catalytic activity	7.08E-03
86	GO:0010030: positive regulation of seed germination	7.32E-03
87	GO:0006355: regulation of transcription, DNA-templated	7.43E-03
88	GO:0010025: wax biosynthetic process	7.90E-03
89	GO:0042545: cell wall modification	8.27E-03
90	GO:0030150: protein import into mitochondrial matrix	8.48E-03
91	GO:0006289: nucleotide-excision repair	8.48E-03
92	GO:0007017: microtubule-based process	9.09E-03
93	GO:0009269: response to desiccation	9.72E-03
94	GO:0009058: biosynthetic process	1.13E-02
95	GO:0010089: xylem development	1.17E-02
96	GO:0006284: base-excision repair	1.17E-02
97	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.24E-02
98	GO:0008284: positive regulation of cell proliferation	1.24E-02
99	GO:0006979: response to oxidative stress	1.31E-02
100	GO:0000226: microtubule cytoskeleton organization	1.31E-02
101	GO:0042335: cuticle development	1.31E-02
102	GO:0048868: pollen tube development	1.38E-02
103	GO:0010268: brassinosteroid homeostasis	1.38E-02
104	GO:0045489: pectin biosynthetic process	1.38E-02
105	GO:0009958: positive gravitropism	1.38E-02
106	GO:0030154: cell differentiation	1.47E-02
107	GO:0010150: leaf senescence	1.48E-02
108	GO:0048825: cotyledon development	1.52E-02
109	GO:0009749: response to glucose	1.52E-02
110	GO:0016132: brassinosteroid biosynthetic process	1.60E-02
111	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.60E-02
112	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.65E-02
113	GO:0009739: response to gibberellin	1.65E-02
114	GO:0010583: response to cyclopentenone	1.67E-02
115	GO:0016125: sterol metabolic process	1.83E-02
116	GO:0009639: response to red or far red light	1.83E-02
117	GO:0006310: DNA recombination	1.83E-02
118	GO:0015031: protein transport	1.85E-02
119	GO:0009611: response to wounding	1.93E-02
120	GO:0009911: positive regulation of flower development	2.07E-02
121	GO:0009826: unidimensional cell growth	2.21E-02
122	GO:0006974: cellular response to DNA damage stimulus	2.24E-02
123	GO:0016049: cell growth	2.42E-02
124	GO:0006970: response to osmotic stress	2.47E-02
125	GO:0048366: leaf development	2.70E-02
126	GO:0007568: aging	2.78E-02
127	GO:0048527: lateral root development	2.78E-02
128	GO:0009651: response to salt stress	2.80E-02
129	GO:0080167: response to karrikin	2.84E-02
130	GO:0009637: response to blue light	2.97E-02
131	GO:0009744: response to sucrose	3.55E-02
132	GO:0009640: photomorphogenesis	3.55E-02
133	GO:0010114: response to red light	3.55E-02
134	GO:0000209: protein polyubiquitination	3.66E-02
135	GO:0009644: response to high light intensity	3.76E-02
136	GO:0016042: lipid catabolic process	4.07E-02
137	GO:0009751: response to salicylic acid	4.12E-02
138	GO:0006281: DNA repair	4.18E-02
139	GO:0009408: response to heat	4.18E-02
140	GO:0009585: red, far-red light phototransduction	4.39E-02
141	GO:0009736: cytokinin-activated signaling pathway	4.39E-02
142	GO:0009753: response to jasmonic acid	4.48E-02
143	GO:0071555: cell wall organization	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0003883: CTP synthase activity	1.11E-05
2	GO:0004105: choline-phosphate cytidylyltransferase activity	1.62E-04
3	GO:0005534: galactose binding	1.62E-04
4	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	1.62E-04
5	GO:0043565: sequence-specific DNA binding	3.12E-04
6	GO:0046910: pectinesterase inhibitor activity	3.42E-04
7	GO:0015117: thiosulfate transmembrane transporter activity	3.69E-04
8	GO:1901677: phosphate transmembrane transporter activity	3.69E-04
9	GO:0008083: growth factor activity	4.47E-04
10	GO:0005310: dicarboxylic acid transmembrane transporter activity	6.04E-04
11	GO:0015141: succinate transmembrane transporter activity	6.04E-04
12	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	6.04E-04
13	GO:0017108: 5'-flap endonuclease activity	6.04E-04
14	GO:0052654: L-leucine transaminase activity	8.63E-04
15	GO:0052655: L-valine transaminase activity	8.63E-04
16	GO:0015131: oxaloacetate transmembrane transporter activity	8.63E-04
17	GO:0052656: L-isoleucine transaminase activity	8.63E-04
18	GO:0016985: mannan endo-1,4-beta-mannosidase activity	1.14E-03
19	GO:0019104: DNA N-glycosylase activity	1.14E-03
20	GO:0004084: branched-chain-amino-acid transaminase activity	1.14E-03
21	GO:0010294: abscisic acid glucosyltransferase activity	1.45E-03
22	GO:0009922: fatty acid elongase activity	1.45E-03
23	GO:0019139: cytokinin dehydrogenase activity	1.45E-03
24	GO:0080122: AMP transmembrane transporter activity	1.45E-03
25	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.78E-03
26	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.78E-03
27	GO:0015217: ADP transmembrane transporter activity	2.14E-03
28	GO:0005347: ATP transmembrane transporter activity	2.14E-03
29	GO:0015140: malate transmembrane transporter activity	2.52E-03
30	GO:0015288: porin activity	2.91E-03
31	GO:0016209: antioxidant activity	2.91E-03
32	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.00E-03
33	GO:0044212: transcription regulatory region DNA binding	3.47E-03
34	GO:0015020: glucuronosyltransferase activity	4.69E-03
35	GO:0015116: sulfate transmembrane transporter activity	5.69E-03
36	GO:0061630: ubiquitin protein ligase activity	5.90E-03
37	GO:0015114: phosphate ion transmembrane transporter activity	6.22E-03
38	GO:0015266: protein channel activity	6.22E-03
39	GO:0045330: aspartyl esterase activity	6.63E-03
40	GO:0003774: motor activity	6.76E-03
41	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.76E-03
42	GO:0008146: sulfotransferase activity	7.32E-03
43	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.90E-03
44	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.90E-03
45	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.90E-03
46	GO:0030599: pectinesterase activity	8.03E-03
47	GO:0043130: ubiquitin binding	8.48E-03
48	GO:0003924: GTPase activity	9.08E-03
49	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.04E-02
50	GO:0030570: pectate lyase activity	1.10E-02
51	GO:0003713: transcription coactivator activity	1.38E-02
52	GO:0004518: nuclease activity	1.67E-02
53	GO:0003684: damaged DNA binding	1.83E-02
54	GO:0016791: phosphatase activity	1.83E-02
55	GO:0005200: structural constituent of cytoskeleton	1.91E-02
56	GO:0008375: acetylglucosaminyltransferase activity	2.24E-02
57	GO:0016788: hydrolase activity, acting on ester bonds	2.34E-02
58	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.51E-02
59	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.66E-02
60	GO:0004222: metalloendopeptidase activity	2.69E-02
61	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.78E-02
62	GO:0016757: transferase activity, transferring glycosyl groups	2.86E-02
63	GO:0003993: acid phosphatase activity	3.06E-02
64	GO:0052689: carboxylic ester hydrolase activity	3.14E-02
65	GO:0005525: GTP binding	3.50E-02
66	GO:0003690: double-stranded DNA binding	4.50E-02
67	GO:0015171: amino acid transmembrane transporter activity	4.72E-02
68	GO:0031625: ubiquitin protein ligase binding	4.72E-02
69	GO:0008234: cysteine-type peptidase activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0033557: Slx1-Slx4 complex	0.00E+00
2	GO:0034426: etioplast membrane	0.00E+00
3	GO:0031357: integral component of chloroplast inner membrane	1.29E-06
4	GO:0009527: plastid outer membrane	1.14E-03
5	GO:0005618: cell wall	1.53E-03
6	GO:0005798: Golgi-associated vesicle	1.78E-03
7	GO:0031305: integral component of mitochondrial inner membrane	2.91E-03
8	GO:0046930: pore complex	3.33E-03
9	GO:0045298: tubulin complex	3.77E-03
10	GO:0009505: plant-type cell wall	5.15E-03
11	GO:0031012: extracellular matrix	6.22E-03
12	GO:0005769: early endosome	7.90E-03
13	GO:0031225: anchored component of membrane	8.71E-03
14	GO:0005622: intracellular	1.06E-02
15	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.17E-02
16	GO:0005615: extracellular space	1.65E-02
17	GO:0071944: cell periphery	1.75E-02
18	GO:0046658: anchored component of plasma membrane	1.96E-02
19	GO:0009707: chloroplast outer membrane	2.51E-02
20	GO:0005743: mitochondrial inner membrane	3.89E-02