GO Enrichment Analysis of Co-expressed Genes with
AT5G23310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006044: N-acetylglucosamine metabolic process | 0.00E+00 |
| 2 | GO:0009249: protein lipoylation | 0.00E+00 |
| 3 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 4 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 5 | GO:0036172: thiamine salvage | 0.00E+00 |
| 6 | GO:0010423: negative regulation of brassinosteroid biosynthetic process | 0.00E+00 |
| 7 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 8 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 9 | GO:0006796: phosphate-containing compound metabolic process | 6.61E-05 |
| 10 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.56E-04 |
| 11 | GO:0034971: histone H3-R17 methylation | 1.93E-04 |
| 12 | GO:0034970: histone H3-R2 methylation | 1.93E-04 |
| 13 | GO:0016031: tRNA import into mitochondrion | 1.93E-04 |
| 14 | GO:0034972: histone H3-R26 methylation | 1.93E-04 |
| 15 | GO:1902265: abscisic acid homeostasis | 1.93E-04 |
| 16 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 4.33E-04 |
| 17 | GO:0019441: tryptophan catabolic process to kynurenine | 4.33E-04 |
| 18 | GO:0016122: xanthophyll metabolic process | 4.33E-04 |
| 19 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 4.33E-04 |
| 20 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.33E-04 |
| 21 | GO:0060359: response to ammonium ion | 4.33E-04 |
| 22 | GO:2000071: regulation of defense response by callose deposition | 4.33E-04 |
| 23 | GO:0007154: cell communication | 4.33E-04 |
| 24 | GO:0009150: purine ribonucleotide metabolic process | 7.06E-04 |
| 25 | GO:0071492: cellular response to UV-A | 7.06E-04 |
| 26 | GO:0043157: response to cation stress | 7.06E-04 |
| 27 | GO:0010476: gibberellin mediated signaling pathway | 7.06E-04 |
| 28 | GO:0010325: raffinose family oligosaccharide biosynthetic process | 7.06E-04 |
| 29 | GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation | 7.06E-04 |
| 30 | GO:0031022: nuclear migration along microfilament | 7.06E-04 |
| 31 | GO:0006591: ornithine metabolic process | 7.06E-04 |
| 32 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 7.06E-04 |
| 33 | GO:0009399: nitrogen fixation | 1.01E-03 |
| 34 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.01E-03 |
| 35 | GO:0009647: skotomorphogenesis | 1.01E-03 |
| 36 | GO:0033014: tetrapyrrole biosynthetic process | 1.01E-03 |
| 37 | GO:0009902: chloroplast relocation | 1.34E-03 |
| 38 | GO:0034613: cellular protein localization | 1.34E-03 |
| 39 | GO:0006542: glutamine biosynthetic process | 1.34E-03 |
| 40 | GO:0071486: cellular response to high light intensity | 1.34E-03 |
| 41 | GO:0009939: positive regulation of gibberellic acid mediated signaling pathway | 1.34E-03 |
| 42 | GO:0009765: photosynthesis, light harvesting | 1.34E-03 |
| 43 | GO:0009649: entrainment of circadian clock | 1.34E-03 |
| 44 | GO:0008295: spermidine biosynthetic process | 1.34E-03 |
| 45 | GO:0006749: glutathione metabolic process | 1.34E-03 |
| 46 | GO:0046283: anthocyanin-containing compound metabolic process | 1.70E-03 |
| 47 | GO:0009229: thiamine diphosphate biosynthetic process | 1.70E-03 |
| 48 | GO:0009107: lipoate biosynthetic process | 1.70E-03 |
| 49 | GO:0010117: photoprotection | 1.70E-03 |
| 50 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.10E-03 |
| 51 | GO:0016070: RNA metabolic process | 2.10E-03 |
| 52 | GO:0009959: negative gravitropism | 2.10E-03 |
| 53 | GO:0070814: hydrogen sulfide biosynthetic process | 2.10E-03 |
| 54 | GO:0031053: primary miRNA processing | 2.10E-03 |
| 55 | GO:0009228: thiamine biosynthetic process | 2.10E-03 |
| 56 | GO:0042793: transcription from plastid promoter | 2.10E-03 |
| 57 | GO:0033365: protein localization to organelle | 2.10E-03 |
| 58 | GO:0009117: nucleotide metabolic process | 2.10E-03 |
| 59 | GO:0009903: chloroplast avoidance movement | 2.52E-03 |
| 60 | GO:0048444: floral organ morphogenesis | 2.52E-03 |
| 61 | GO:0034389: lipid particle organization | 2.52E-03 |
| 62 | GO:0009704: de-etiolation | 3.43E-03 |
| 63 | GO:0009231: riboflavin biosynthetic process | 3.43E-03 |
| 64 | GO:0048564: photosystem I assembly | 3.43E-03 |
| 65 | GO:0045292: mRNA cis splicing, via spliceosome | 3.43E-03 |
| 66 | GO:0010928: regulation of auxin mediated signaling pathway | 3.43E-03 |
| 67 | GO:0009407: toxin catabolic process | 3.83E-03 |
| 68 | GO:0006526: arginine biosynthetic process | 3.93E-03 |
| 69 | GO:0032544: plastid translation | 3.93E-03 |
| 70 | GO:0022900: electron transport chain | 3.93E-03 |
| 71 | GO:0010100: negative regulation of photomorphogenesis | 3.93E-03 |
| 72 | GO:0006783: heme biosynthetic process | 4.44E-03 |
| 73 | GO:0009056: catabolic process | 4.44E-03 |
| 74 | GO:0015780: nucleotide-sugar transport | 4.44E-03 |
| 75 | GO:0019432: triglyceride biosynthetic process | 4.44E-03 |
| 76 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.99E-03 |
| 77 | GO:0009098: leucine biosynthetic process | 4.99E-03 |
| 78 | GO:1900865: chloroplast RNA modification | 4.99E-03 |
| 79 | GO:0009688: abscisic acid biosynthetic process | 5.55E-03 |
| 80 | GO:0009641: shade avoidance | 5.55E-03 |
| 81 | GO:0009970: cellular response to sulfate starvation | 5.55E-03 |
| 82 | GO:0000103: sulfate assimilation | 5.55E-03 |
| 83 | GO:0009682: induced systemic resistance | 6.13E-03 |
| 84 | GO:0006790: sulfur compound metabolic process | 6.73E-03 |
| 85 | GO:0050826: response to freezing | 7.36E-03 |
| 86 | GO:0006094: gluconeogenesis | 7.36E-03 |
| 87 | GO:0030048: actin filament-based movement | 7.36E-03 |
| 88 | GO:0009585: red, far-red light phototransduction | 7.63E-03 |
| 89 | GO:0010207: photosystem II assembly | 8.01E-03 |
| 90 | GO:0006071: glycerol metabolic process | 9.35E-03 |
| 91 | GO:0000162: tryptophan biosynthetic process | 9.35E-03 |
| 92 | GO:0006874: cellular calcium ion homeostasis | 1.08E-02 |
| 93 | GO:0019915: lipid storage | 1.15E-02 |
| 94 | GO:0032259: methylation | 1.17E-02 |
| 95 | GO:0007005: mitochondrion organization | 1.23E-02 |
| 96 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.23E-02 |
| 97 | GO:0006281: DNA repair | 1.24E-02 |
| 98 | GO:0006012: galactose metabolic process | 1.31E-02 |
| 99 | GO:0010118: stomatal movement | 1.55E-02 |
| 100 | GO:0009958: positive gravitropism | 1.63E-02 |
| 101 | GO:0006520: cellular amino acid metabolic process | 1.63E-02 |
| 102 | GO:0009851: auxin biosynthetic process | 1.81E-02 |
| 103 | GO:0002229: defense response to oomycetes | 1.90E-02 |
| 104 | GO:0009630: gravitropism | 1.99E-02 |
| 105 | GO:0007264: small GTPase mediated signal transduction | 1.99E-02 |
| 106 | GO:0019761: glucosinolate biosynthetic process | 1.99E-02 |
| 107 | GO:1901657: glycosyl compound metabolic process | 2.08E-02 |
| 108 | GO:0030163: protein catabolic process | 2.08E-02 |
| 109 | GO:0010027: thylakoid membrane organization | 2.47E-02 |
| 110 | GO:0016126: sterol biosynthetic process | 2.47E-02 |
| 111 | GO:0010029: regulation of seed germination | 2.57E-02 |
| 112 | GO:0042128: nitrate assimilation | 2.67E-02 |
| 113 | GO:0048573: photoperiodism, flowering | 2.77E-02 |
| 114 | GO:0009658: chloroplast organization | 2.92E-02 |
| 115 | GO:0000160: phosphorelay signal transduction system | 3.09E-02 |
| 116 | GO:0010119: regulation of stomatal movement | 3.31E-02 |
| 117 | GO:0009637: response to blue light | 3.53E-02 |
| 118 | GO:0009867: jasmonic acid mediated signaling pathway | 3.53E-02 |
| 119 | GO:0006508: proteolysis | 3.63E-02 |
| 120 | GO:0009640: photomorphogenesis | 4.23E-02 |
| 121 | GO:0008643: carbohydrate transport | 4.47E-02 |
| 122 | GO:0009636: response to toxic substance | 4.59E-02 |
| 123 | GO:0031347: regulation of defense response | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 2 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 3 | GO:0004585: ornithine carbamoyltransferase activity | 0.00E+00 |
| 4 | GO:0050486: intramolecular transferase activity, transferring hydroxy groups | 0.00E+00 |
| 5 | GO:0004343: glucosamine 6-phosphate N-acetyltransferase activity | 0.00E+00 |
| 6 | GO:0102996: beta,beta digalactosyldiacylglycerol galactosyltransferase activity | 0.00E+00 |
| 7 | GO:0018738: S-formylglutathione hydrolase activity | 0.00E+00 |
| 8 | GO:0004848: ureidoglycolate hydrolase activity | 6.53E-06 |
| 9 | GO:0004427: inorganic diphosphatase activity | 1.22E-04 |
| 10 | GO:0046480: galactolipid galactosyltransferase activity | 1.93E-04 |
| 11 | GO:0080079: cellobiose glucosidase activity | 1.93E-04 |
| 12 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.93E-04 |
| 13 | GO:0004325: ferrochelatase activity | 1.93E-04 |
| 14 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 4.33E-04 |
| 15 | GO:0017118: lipoyltransferase activity | 4.33E-04 |
| 16 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 4.33E-04 |
| 17 | GO:0010331: gibberellin binding | 4.33E-04 |
| 18 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 4.33E-04 |
| 19 | GO:0016415: octanoyltransferase activity | 4.33E-04 |
| 20 | GO:0004766: spermidine synthase activity | 4.33E-04 |
| 21 | GO:0016743: carboxyl- or carbamoyltransferase activity | 4.33E-04 |
| 22 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 4.33E-04 |
| 23 | GO:0004061: arylformamidase activity | 4.33E-04 |
| 24 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 7.06E-04 |
| 25 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 7.06E-04 |
| 26 | GO:0008469: histone-arginine N-methyltransferase activity | 7.06E-04 |
| 27 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 7.06E-04 |
| 28 | GO:0019003: GDP binding | 7.06E-04 |
| 29 | GO:0003861: 3-isopropylmalate dehydratase activity | 7.06E-04 |
| 30 | GO:0003935: GTP cyclohydrolase II activity | 7.06E-04 |
| 31 | GO:0000339: RNA cap binding | 1.01E-03 |
| 32 | GO:0047627: adenylylsulfatase activity | 1.01E-03 |
| 33 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 1.01E-03 |
| 34 | GO:0000254: C-4 methylsterol oxidase activity | 1.01E-03 |
| 35 | GO:0035529: NADH pyrophosphatase activity | 1.01E-03 |
| 36 | GO:0008168: methyltransferase activity | 1.02E-03 |
| 37 | GO:0004834: tryptophan synthase activity | 1.34E-03 |
| 38 | GO:0005319: lipid transporter activity | 1.34E-03 |
| 39 | GO:0008080: N-acetyltransferase activity | 1.51E-03 |
| 40 | GO:0004356: glutamate-ammonia ligase activity | 1.70E-03 |
| 41 | GO:0030151: molybdenum ion binding | 1.70E-03 |
| 42 | GO:0016462: pyrophosphatase activity | 2.10E-03 |
| 43 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.52E-03 |
| 44 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.96E-03 |
| 45 | GO:0016621: cinnamoyl-CoA reductase activity | 2.96E-03 |
| 46 | GO:0004034: aldose 1-epimerase activity | 3.43E-03 |
| 47 | GO:0004222: metalloendopeptidase activity | 3.83E-03 |
| 48 | GO:0071949: FAD binding | 4.44E-03 |
| 49 | GO:0001055: RNA polymerase II activity | 4.99E-03 |
| 50 | GO:0004364: glutathione transferase activity | 5.44E-03 |
| 51 | GO:0004185: serine-type carboxypeptidase activity | 5.66E-03 |
| 52 | GO:0001054: RNA polymerase I activity | 6.13E-03 |
| 53 | GO:0004860: protein kinase inhibitor activity | 6.13E-03 |
| 54 | GO:0003824: catalytic activity | 6.26E-03 |
| 55 | GO:0008378: galactosyltransferase activity | 6.73E-03 |
| 56 | GO:0001056: RNA polymerase III activity | 6.73E-03 |
| 57 | GO:0031072: heat shock protein binding | 7.36E-03 |
| 58 | GO:0015266: protein channel activity | 7.36E-03 |
| 59 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.01E-03 |
| 60 | GO:0004970: ionotropic glutamate receptor activity | 8.67E-03 |
| 61 | GO:0005217: intracellular ligand-gated ion channel activity | 8.67E-03 |
| 62 | GO:0005528: FK506 binding | 1.01E-02 |
| 63 | GO:0022857: transmembrane transporter activity | 1.02E-02 |
| 64 | GO:0004176: ATP-dependent peptidase activity | 1.15E-02 |
| 65 | GO:0004386: helicase activity | 1.19E-02 |
| 66 | GO:0016853: isomerase activity | 1.72E-02 |
| 67 | GO:0050662: coenzyme binding | 1.72E-02 |
| 68 | GO:0048038: quinone binding | 1.90E-02 |
| 69 | GO:0000156: phosphorelay response regulator activity | 2.08E-02 |
| 70 | GO:0008237: metallopeptidase activity | 2.27E-02 |
| 71 | GO:0016597: amino acid binding | 2.37E-02 |
| 72 | GO:0016168: chlorophyll binding | 2.57E-02 |
| 73 | GO:0030247: polysaccharide binding | 2.77E-02 |
| 74 | GO:0000287: magnesium ion binding | 2.87E-02 |
| 75 | GO:0046982: protein heterodimerization activity | 2.87E-02 |
| 76 | GO:0008236: serine-type peptidase activity | 2.88E-02 |
| 77 | GO:0004601: peroxidase activity | 2.92E-02 |
| 78 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.98E-02 |
| 79 | GO:0016788: hydrolase activity, acting on ester bonds | 2.98E-02 |
| 80 | GO:0003746: translation elongation factor activity | 3.53E-02 |
| 81 | GO:0003697: single-stranded DNA binding | 3.53E-02 |
| 82 | GO:0008422: beta-glucosidase activity | 3.76E-02 |
| 83 | GO:0050661: NADP binding | 3.87E-02 |
| 84 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.87E-02 |
| 85 | GO:0052689: carboxylic ester hydrolase activity | 4.00E-02 |
| 86 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.47E-02 |
| 87 | GO:0043621: protein self-association | 4.47E-02 |
| 88 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.71E-02 |
| 89 | GO:0051287: NAD binding | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030427: site of polarized growth | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.46E-11 |
| 3 | GO:0005845: mRNA cap binding complex | 1.93E-04 |
| 4 | GO:0000152: nuclear ubiquitin ligase complex | 1.93E-04 |
| 5 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 1.93E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.99E-04 |
| 7 | GO:0005846: nuclear cap binding complex | 4.33E-04 |
| 8 | GO:0009570: chloroplast stroma | 1.28E-03 |
| 9 | GO:0009517: PSII associated light-harvesting complex II | 1.34E-03 |
| 10 | GO:0031969: chloroplast membrane | 1.49E-03 |
| 11 | GO:0055035: plastid thylakoid membrane | 1.70E-03 |
| 12 | GO:0031359: integral component of chloroplast outer membrane | 2.96E-03 |
| 13 | GO:0009707: chloroplast outer membrane | 3.47E-03 |
| 14 | GO:0005811: lipid particle | 3.93E-03 |
| 15 | GO:0009941: chloroplast envelope | 4.13E-03 |
| 16 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.44E-03 |
| 17 | GO:0016604: nuclear body | 4.99E-03 |
| 18 | GO:0009508: plastid chromosome | 7.36E-03 |
| 19 | GO:0009536: plastid | 7.60E-03 |
| 20 | GO:0005777: peroxisome | 7.93E-03 |
| 21 | GO:0005764: lysosome | 8.01E-03 |
| 22 | GO:0000419: DNA-directed RNA polymerase V complex | 9.35E-03 |
| 23 | GO:0015935: small ribosomal subunit | 1.15E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 1.36E-02 |
| 25 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.39E-02 |
| 26 | GO:0009523: photosystem II | 1.81E-02 |
| 27 | GO:0005829: cytosol | 1.88E-02 |
| 28 | GO:0009295: nucleoid | 2.27E-02 |
| 29 | GO:0005819: spindle | 3.76E-02 |
| 30 | GO:0031966: mitochondrial membrane | 4.96E-02 |