GO Enrichment Analysis of Co-expressed Genes with
AT5G23250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 2 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 3 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 4 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 5 | GO:0006412: translation | 3.74E-30 |
| 6 | GO:0006364: rRNA processing | 1.43E-07 |
| 7 | GO:0042254: ribosome biogenesis | 2.01E-07 |
| 8 | GO:0006626: protein targeting to mitochondrion | 1.37E-06 |
| 9 | GO:0000027: ribosomal large subunit assembly | 3.12E-06 |
| 10 | GO:0031120: snRNA pseudouridine synthesis | 6.10E-05 |
| 11 | GO:0031118: rRNA pseudouridine synthesis | 6.10E-05 |
| 12 | GO:0030490: maturation of SSU-rRNA | 6.10E-05 |
| 13 | GO:0000494: box C/D snoRNA 3'-end processing | 6.10E-05 |
| 14 | GO:1990258: histone glutamine methylation | 6.10E-05 |
| 15 | GO:0010162: seed dormancy process | 6.18E-05 |
| 16 | GO:0009967: positive regulation of signal transduction | 1.48E-04 |
| 17 | GO:0045039: protein import into mitochondrial inner membrane | 2.51E-04 |
| 18 | GO:0010197: polar nucleus fusion | 3.35E-04 |
| 19 | GO:0009855: determination of bilateral symmetry | 3.65E-04 |
| 20 | GO:0042274: ribosomal small subunit biogenesis | 4.88E-04 |
| 21 | GO:0042273: ribosomal large subunit biogenesis | 4.88E-04 |
| 22 | GO:0031167: rRNA methylation | 6.19E-04 |
| 23 | GO:0000741: karyogamy | 7.57E-04 |
| 24 | GO:0080186: developmental vegetative growth | 1.05E-03 |
| 25 | GO:0000028: ribosomal small subunit assembly | 1.21E-03 |
| 26 | GO:0001510: RNA methylation | 1.38E-03 |
| 27 | GO:0001558: regulation of cell growth | 1.38E-03 |
| 28 | GO:0007338: single fertilization | 1.55E-03 |
| 29 | GO:0030422: production of siRNA involved in RNA interference | 1.92E-03 |
| 30 | GO:0016569: covalent chromatin modification | 2.16E-03 |
| 31 | GO:0009553: embryo sac development | 2.23E-03 |
| 32 | GO:0006820: anion transport | 2.32E-03 |
| 33 | GO:0030150: protein import into mitochondrial matrix | 3.42E-03 |
| 34 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.42E-03 |
| 35 | GO:0051302: regulation of cell division | 3.65E-03 |
| 36 | GO:0015992: proton transport | 3.89E-03 |
| 37 | GO:0009294: DNA mediated transformation | 4.40E-03 |
| 38 | GO:0071215: cellular response to abscisic acid stimulus | 4.40E-03 |
| 39 | GO:0009561: megagametogenesis | 4.65E-03 |
| 40 | GO:0008033: tRNA processing | 5.19E-03 |
| 41 | GO:0009960: endosperm development | 5.46E-03 |
| 42 | GO:0006635: fatty acid beta-oxidation | 6.32E-03 |
| 43 | GO:0080156: mitochondrial mRNA modification | 6.32E-03 |
| 44 | GO:0032502: developmental process | 6.61E-03 |
| 45 | GO:0009567: double fertilization forming a zygote and endosperm | 7.21E-03 |
| 46 | GO:0006811: ion transport | 1.05E-02 |
| 47 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.59E-02 |
| 48 | GO:0010224: response to UV-B | 1.76E-02 |
| 49 | GO:0048367: shoot system development | 1.97E-02 |
| 50 | GO:0006396: RNA processing | 2.25E-02 |
| 51 | GO:0000398: mRNA splicing, via spliceosome | 2.44E-02 |
| 52 | GO:0009845: seed germination | 2.73E-02 |
| 53 | GO:0006414: translational elongation | 2.95E-02 |
| 54 | GO:0010468: regulation of gene expression | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003735: structural constituent of ribosome | 9.18E-36 |
| 2 | GO:0019843: rRNA binding | 1.71E-08 |
| 3 | GO:0003723: RNA binding | 1.33E-06 |
| 4 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.23E-05 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 6.10E-05 |
| 6 | GO:0005078: MAP-kinase scaffold activity | 1.48E-04 |
| 7 | GO:0004407: histone deacetylase activity | 1.63E-04 |
| 8 | GO:0008649: rRNA methyltransferase activity | 2.51E-04 |
| 9 | GO:0003729: mRNA binding | 6.66E-04 |
| 10 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 7.57E-04 |
| 11 | GO:0008235: metalloexopeptidase activity | 1.05E-03 |
| 12 | GO:0030515: snoRNA binding | 1.05E-03 |
| 13 | GO:0015288: porin activity | 1.21E-03 |
| 14 | GO:0008308: voltage-gated anion channel activity | 1.38E-03 |
| 15 | GO:0001055: RNA polymerase II activity | 1.73E-03 |
| 16 | GO:0001054: RNA polymerase I activity | 2.12E-03 |
| 17 | GO:0001056: RNA polymerase III activity | 2.32E-03 |
| 18 | GO:0009982: pseudouridine synthase activity | 2.52E-03 |
| 19 | GO:0000175: 3'-5'-exoribonuclease activity | 2.52E-03 |
| 20 | GO:0015266: protein channel activity | 2.52E-03 |
| 21 | GO:0000166: nucleotide binding | 3.48E-03 |
| 22 | GO:0050897: cobalt ion binding | 1.09E-02 |
| 23 | GO:0003746: translation elongation factor activity | 1.16E-02 |
| 24 | GO:0003697: single-stranded DNA binding | 1.16E-02 |
| 25 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.71E-02 |
| 26 | GO:0008026: ATP-dependent helicase activity | 2.29E-02 |
| 27 | GO:0005507: copper ion binding | 2.82E-02 |
| 28 | GO:0008565: protein transporter activity | 2.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005840: ribosome | 5.15E-20 |
| 3 | GO:0022626: cytosolic ribosome | 9.54E-18 |
| 4 | GO:0022627: cytosolic small ribosomal subunit | 4.60E-16 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 4.99E-15 |
| 6 | GO:0005730: nucleolus | 5.92E-14 |
| 7 | GO:0005742: mitochondrial outer membrane translocase complex | 3.35E-05 |
| 8 | GO:0015934: large ribosomal subunit | 5.31E-05 |
| 9 | GO:0032040: small-subunit processome | 8.59E-05 |
| 10 | GO:0005758: mitochondrial intermembrane space | 1.63E-04 |
| 11 | GO:0031429: box H/ACA snoRNP complex | 3.65E-04 |
| 12 | GO:0031428: box C/D snoRNP complex | 7.57E-04 |
| 13 | GO:0046930: pore complex | 1.38E-03 |
| 14 | GO:0005743: mitochondrial inner membrane | 1.54E-03 |
| 15 | GO:0005736: DNA-directed RNA polymerase I complex | 1.55E-03 |
| 16 | GO:0005666: DNA-directed RNA polymerase III complex | 1.73E-03 |
| 17 | GO:0015030: Cajal body | 1.73E-03 |
| 18 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.92E-03 |
| 19 | GO:0005737: cytoplasm | 1.95E-03 |
| 20 | GO:0005834: heterotrimeric G-protein complex | 2.04E-03 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.32E-03 |
| 22 | GO:0019013: viral nucleocapsid | 2.52E-03 |
| 23 | GO:0005739: mitochondrion | 2.96E-03 |
| 24 | GO:0000419: DNA-directed RNA polymerase V complex | 3.18E-03 |
| 25 | GO:0009506: plasmodesma | 3.31E-03 |
| 26 | GO:0005759: mitochondrial matrix | 3.58E-03 |
| 27 | GO:0005741: mitochondrial outer membrane | 3.89E-03 |
| 28 | GO:0015935: small ribosomal subunit | 3.89E-03 |
| 29 | GO:0005829: cytosol | 6.00E-03 |
| 30 | GO:0005773: vacuole | 6.13E-03 |
| 31 | GO:0016592: mediator complex | 6.61E-03 |
| 32 | GO:0030529: intracellular ribonucleoprotein complex | 8.16E-03 |
| 33 | GO:0005681: spliceosomal complex | 1.93E-02 |
| 34 | GO:0005747: mitochondrial respiratory chain complex I | 1.97E-02 |
| 35 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.34E-02 |
| 36 | GO:0009507: chloroplast | 2.56E-02 |
| 37 | GO:0009543: chloroplast thylakoid lumen | 2.58E-02 |
| 38 | GO:0005774: vacuolar membrane | 4.06E-02 |
| 39 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.73E-02 |
| 40 | GO:0005618: cell wall | 4.78E-02 |
| 41 | GO:0009536: plastid | 4.88E-02 |