co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G22640

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
4	GO:0097164: ammonium ion metabolic process	0.00E+00
5	GO:0010275: NAD(P)H dehydrogenase complex assembly	8.18E-08
6	GO:0090307: mitotic spindle assembly	7.73E-07
7	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	7.73E-07
8	GO:0051418: microtubule nucleation by microtubule organizing center	3.50E-05
9	GO:0034971: histone H3-R17 methylation	3.50E-05
10	GO:0042371: vitamin K biosynthetic process	3.50E-05
11	GO:0071454: cellular response to anoxia	3.50E-05
12	GO:0034080: CENP-A containing nucleosome assembly	3.50E-05
13	GO:0034970: histone H3-R2 methylation	3.50E-05
14	GO:0034972: histone H3-R26 methylation	3.50E-05
15	GO:0070981: L-asparagine biosynthetic process	8.78E-05
16	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	8.78E-05
17	GO:0006529: asparagine biosynthetic process	8.78E-05
18	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	8.78E-05
19	GO:0080153: negative regulation of reductive pentose-phosphate cycle	8.78E-05
20	GO:0033566: gamma-tubulin complex localization	8.78E-05
21	GO:0048255: mRNA stabilization	8.78E-05
22	GO:0009150: purine ribonucleotide metabolic process	1.52E-04
23	GO:0007052: mitotic spindle organization	1.52E-04
24	GO:0033014: tetrapyrrole biosynthetic process	2.25E-04
25	GO:0034508: centromere complex assembly	2.25E-04
26	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.25E-04
27	GO:0016126: sterol biosynthetic process	2.94E-04
28	GO:0031122: cytoplasmic microtubule organization	3.05E-04
29	GO:0071483: cellular response to blue light	3.05E-04
30	GO:0016123: xanthophyll biosynthetic process	3.89E-04
31	GO:0017148: negative regulation of translation	5.70E-04
32	GO:0048564: photosystem I assembly	7.68E-04
33	GO:0042255: ribosome assembly	7.68E-04
34	GO:0006353: DNA-templated transcription, termination	7.68E-04
35	GO:0071482: cellular response to light stimulus	8.71E-04
36	GO:0022900: electron transport chain	8.71E-04
37	GO:0006783: heme biosynthetic process	9.78E-04
38	GO:0006779: porphyrin-containing compound biosynthetic process	1.09E-03
39	GO:0045036: protein targeting to chloroplast	1.20E-03
40	GO:0006352: DNA-templated transcription, initiation	1.32E-03
41	GO:0006790: sulfur compound metabolic process	1.44E-03
42	GO:0010207: photosystem II assembly	1.70E-03
43	GO:0034605: cellular response to heat	1.70E-03
44	GO:0006541: glutamine metabolic process	1.70E-03
45	GO:0019253: reductive pentose-phosphate cycle	1.70E-03
46	GO:0090351: seedling development	1.84E-03
47	GO:0009451: RNA modification	1.99E-03
48	GO:0006289: nucleotide-excision repair	2.12E-03
49	GO:0007010: cytoskeleton organization	2.12E-03
50	GO:0007017: microtubule-based process	2.26E-03
51	GO:0016226: iron-sulfur cluster assembly	2.56E-03
52	GO:0080092: regulation of pollen tube growth	2.56E-03
53	GO:0009658: chloroplast organization	2.99E-03
54	GO:0070417: cellular response to cold	3.03E-03
55	GO:0042254: ribosome biogenesis	3.04E-03
56	GO:0008033: tRNA processing	3.20E-03
57	GO:0000226: microtubule cytoskeleton organization	3.20E-03
58	GO:0009958: positive gravitropism	3.36E-03
59	GO:0009646: response to absence of light	3.53E-03
60	GO:0032502: developmental process	4.06E-03
61	GO:0000910: cytokinesis	4.80E-03
62	GO:0009744: response to sucrose	8.41E-03
63	GO:0042538: hyperosmotic salinity response	9.86E-03
64	GO:0051603: proteolysis involved in cellular protein catabolic process	1.06E-02
65	GO:0009909: regulation of flower development	1.11E-02
66	GO:0010228: vegetative to reproductive phase transition of meristem	2.02E-02
67	GO:0008380: RNA splicing	2.22E-02
68	GO:0009860: pollen tube growth	2.82E-02
69	GO:0009793: embryo development ending in seed dormancy	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0043015: gamma-tubulin binding	1.51E-06
4	GO:0004071: aspartate-ammonia ligase activity	3.50E-05
5	GO:0004325: ferrochelatase activity	3.50E-05
6	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	8.78E-05
7	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	8.78E-05
8	GO:0035241: protein-arginine omega-N monomethyltransferase activity	8.78E-05
9	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	8.78E-05
10	GO:0008469: histone-arginine N-methyltransferase activity	1.52E-04
11	GO:0032947: protein complex scaffold	1.52E-04
12	GO:0004518: nuclease activity	2.16E-04
13	GO:0047627: adenylylsulfatase activity	2.25E-04
14	GO:0043023: ribosomal large subunit binding	2.25E-04
15	GO:0000254: C-4 methylsterol oxidase activity	2.25E-04
16	GO:0016851: magnesium chelatase activity	2.25E-04
17	GO:0001053: plastid sigma factor activity	3.05E-04
18	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.05E-04
19	GO:0016987: sigma factor activity	3.05E-04
20	GO:0051011: microtubule minus-end binding	3.89E-04
21	GO:0015631: tubulin binding	5.70E-04
22	GO:0003690: double-stranded DNA binding	8.51E-04
23	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.32E-03
24	GO:0019843: rRNA binding	1.42E-03
25	GO:0051536: iron-sulfur cluster binding	2.12E-03
26	GO:0003727: single-stranded RNA binding	2.87E-03
27	GO:0005506: iron ion binding	3.35E-03
28	GO:0048038: quinone binding	3.88E-03
29	GO:0005200: structural constituent of cytoskeleton	4.60E-03
30	GO:0042803: protein homodimerization activity	4.62E-03
31	GO:0004519: endonuclease activity	5.91E-03
32	GO:0003746: translation elongation factor activity	7.05E-03
33	GO:0042393: histone binding	7.72E-03
34	GO:0004185: serine-type carboxypeptidase activity	8.41E-03
35	GO:0051537: 2 iron, 2 sulfur cluster binding	8.88E-03
36	GO:0005198: structural molecule activity	9.12E-03
37	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.04E-02
38	GO:0003777: microtubule motor activity	1.11E-02
39	GO:0003723: RNA binding	1.28E-02
40	GO:0008017: microtubule binding	2.02E-02
41	GO:0008168: methyltransferase activity	2.60E-02
42	GO:0046982: protein heterodimerization activity	2.64E-02
43	GO:0009055: electron carrier activity	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	7.07E-10
2	GO:0008274: gamma-tubulin ring complex	8.18E-08
3	GO:0000923: equatorial microtubule organizing center	7.73E-07
4	GO:0009535: chloroplast thylakoid membrane	5.07E-06
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.78E-05
6	GO:0031021: interphase microtubule organizing center	3.50E-05
7	GO:0009570: chloroplast stroma	1.21E-04
8	GO:0005640: nuclear outer membrane	1.52E-04
9	GO:0005828: kinetochore microtubule	3.05E-04
10	GO:0000930: gamma-tubulin complex	3.05E-04
11	GO:0030286: dynein complex	3.05E-04
12	GO:0000776: kinetochore	3.89E-04
13	GO:0055035: plastid thylakoid membrane	3.89E-04
14	GO:0072686: mitotic spindle	3.89E-04
15	GO:0009840: chloroplastic endopeptidase Clp complex	5.70E-04
16	GO:0000922: spindle pole	9.78E-04
17	GO:0016324: apical plasma membrane	1.20E-03
18	GO:0009574: preprophase band	1.57E-03
19	GO:0005875: microtubule associated complex	1.97E-03
20	GO:0043234: protein complex	1.97E-03
21	GO:0042651: thylakoid membrane	2.26E-03
22	GO:0005874: microtubule	3.57E-03
23	GO:0005635: nuclear envelope	1.09E-02
24	GO:0005777: peroxisome	1.11E-02
25	GO:0005623: cell	1.59E-02
26	GO:0009524: phragmoplast	1.62E-02
27	GO:0031969: chloroplast membrane	3.11E-02
28	GO:0043231: intracellular membrane-bounded organelle	4.41E-02
29	GO:0005739: mitochondrion	4.59E-02