co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G22350

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043462: regulation of ATPase activity	0.00E+00
2	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
3	GO:0009699: phenylpropanoid biosynthetic process	1.35E-08
4	GO:0045227: capsule polysaccharide biosynthetic process	6.54E-08
5	GO:0033358: UDP-L-arabinose biosynthetic process	6.54E-08
6	GO:0009408: response to heat	2.09E-07
7	GO:0051131: chaperone-mediated protein complex assembly	9.15E-06
8	GO:0009225: nucleotide-sugar metabolic process	1.57E-05
9	GO:0051764: actin crosslink formation	1.71E-05
10	GO:0006012: galactose metabolic process	4.14E-05
11	GO:0006457: protein folding	4.24E-05
12	GO:0019567: arabinose biosynthetic process	1.46E-04
13	GO:0034214: protein hexamerization	1.46E-04
14	GO:0051014: actin filament severing	1.46E-04
15	GO:0003400: regulation of COPII vesicle coating	1.46E-04
16	GO:0071277: cellular response to calcium ion	1.46E-04
17	GO:0046244: salicylic acid catabolic process	1.46E-04
18	GO:0099636: cytoplasmic streaming	1.46E-04
19	GO:0009911: positive regulation of flower development	1.61E-04
20	GO:0008202: steroid metabolic process	1.88E-04
21	GO:0009845: seed germination	2.01E-04
22	GO:0019538: protein metabolic process	2.22E-04
23	GO:0009073: aromatic amino acid family biosynthetic process	2.59E-04
24	GO:0010155: regulation of proton transport	3.33E-04
25	GO:0009805: coumarin biosynthetic process	3.33E-04
26	GO:0010372: positive regulation of gibberellin biosynthetic process	3.33E-04
27	GO:0009812: flavonoid metabolic process	3.33E-04
28	GO:0048480: stigma development	3.33E-04
29	GO:0015865: purine nucleotide transport	3.33E-04
30	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	3.33E-04
31	GO:0090351: seedling development	4.32E-04
32	GO:0051017: actin filament bundle assembly	5.33E-04
33	GO:0006065: UDP-glucuronate biosynthetic process	5.47E-04
34	GO:0010366: negative regulation of ethylene biosynthetic process	5.47E-04
35	GO:0010447: response to acidic pH	5.47E-04
36	GO:0052546: cell wall pectin metabolic process	5.47E-04
37	GO:0061077: chaperone-mediated protein folding	6.43E-04
38	GO:0051639: actin filament network formation	7.83E-04
39	GO:0046902: regulation of mitochondrial membrane permeability	7.83E-04
40	GO:0010971: positive regulation of G2/M transition of mitotic cell cycle	7.83E-04
41	GO:0009800: cinnamic acid biosynthetic process	7.83E-04
42	GO:0009611: response to wounding	8.04E-04
43	GO:0080167: response to karrikin	8.23E-04
44	GO:0009306: protein secretion	8.29E-04
45	GO:0030104: water homeostasis	1.04E-03
46	GO:0030007: cellular potassium ion homeostasis	1.04E-03
47	GO:1902347: response to strigolactone	1.04E-03
48	GO:0009694: jasmonic acid metabolic process	1.04E-03
49	GO:0032957: inositol trisphosphate metabolic process	1.31E-03
50	GO:0016926: protein desumoylation	1.31E-03
51	GO:0030041: actin filament polymerization	1.31E-03
52	GO:0032502: developmental process	1.35E-03
53	GO:0048317: seed morphogenesis	1.61E-03
54	GO:0006559: L-phenylalanine catabolic process	1.61E-03
55	GO:0046855: inositol phosphate dephosphorylation	1.61E-03
56	GO:0010286: heat acclimation	1.62E-03
57	GO:0016579: protein deubiquitination	1.71E-03
58	GO:0009615: response to virus	1.81E-03
59	GO:0009423: chorismate biosynthetic process	1.93E-03
60	GO:0048573: photoperiodism, flowering	2.13E-03
61	GO:0010044: response to aluminum ion	2.27E-03
62	GO:0006744: ubiquinone biosynthetic process	2.27E-03
63	GO:0051693: actin filament capping	2.27E-03
64	GO:0000338: protein deneddylation	2.27E-03
65	GO:0071669: plant-type cell wall organization or biogenesis	2.27E-03
66	GO:0070370: cellular heat acclimation	2.27E-03
67	GO:0048767: root hair elongation	2.47E-03
68	GO:0009832: plant-type cell wall biogenesis	2.47E-03
69	GO:0050821: protein stabilization	2.63E-03
70	GO:0045010: actin nucleation	2.63E-03
71	GO:0009819: drought recovery	2.63E-03
72	GO:0006402: mRNA catabolic process	2.63E-03
73	GO:0009808: lignin metabolic process	3.00E-03
74	GO:0010100: negative regulation of photomorphogenesis	3.00E-03
75	GO:0007338: single fertilization	3.40E-03
76	GO:0009051: pentose-phosphate shunt, oxidative branch	3.40E-03
77	GO:0009555: pollen development	3.52E-03
78	GO:0090332: stomatal closure	3.81E-03
79	GO:0030042: actin filament depolymerization	3.81E-03
80	GO:0010215: cellulose microfibril organization	4.23E-03
81	GO:0046856: phosphatidylinositol dephosphorylation	4.67E-03
82	GO:0009698: phenylpropanoid metabolic process	4.67E-03
83	GO:0006913: nucleocytoplasmic transport	4.67E-03
84	GO:0006812: cation transport	4.80E-03
85	GO:0000266: mitochondrial fission	5.13E-03
86	GO:0002213: defense response to insect	5.13E-03
87	GO:0016024: CDP-diacylglycerol biosynthetic process	5.13E-03
88	GO:0015706: nitrate transport	5.13E-03
89	GO:0010152: pollen maturation	5.13E-03
90	GO:0016925: protein sumoylation	5.13E-03
91	GO:0009809: lignin biosynthetic process	5.15E-03
92	GO:0006813: potassium ion transport	5.15E-03
93	GO:0006810: transport	5.20E-03
94	GO:0010224: response to UV-B	5.33E-03
95	GO:0030036: actin cytoskeleton organization	5.60E-03
96	GO:0046274: lignin catabolic process	5.60E-03
97	GO:0006006: glucose metabolic process	5.60E-03
98	GO:0009909: regulation of flower development	5.70E-03
99	GO:0046686: response to cadmium ion	5.76E-03
100	GO:0034605: cellular response to heat	6.09E-03
101	GO:0010143: cutin biosynthetic process	6.09E-03
102	GO:0002237: response to molecule of bacterial origin	6.09E-03
103	GO:0007015: actin filament organization	6.09E-03
104	GO:0006446: regulation of translational initiation	6.09E-03
105	GO:0006869: lipid transport	6.45E-03
106	GO:0010167: response to nitrate	6.59E-03
107	GO:0009901: anther dehiscence	6.59E-03
108	GO:0000027: ribosomal large subunit assembly	7.63E-03
109	GO:0007010: cytoskeleton organization	7.63E-03
110	GO:0010187: negative regulation of seed germination	7.63E-03
111	GO:0043622: cortical microtubule organization	8.18E-03
112	GO:0009269: response to desiccation	8.73E-03
113	GO:0007005: mitochondrion organization	9.30E-03
114	GO:0040007: growth	9.89E-03
115	GO:0006817: phosphate ion transport	1.05E-02
116	GO:0048653: anther development	1.17E-02
117	GO:0000271: polysaccharide biosynthetic process	1.17E-02
118	GO:0006413: translational initiation	1.18E-02
119	GO:0016036: cellular response to phosphate starvation	1.18E-02
120	GO:0048868: pollen tube development	1.24E-02
121	GO:0009960: endosperm development	1.24E-02
122	GO:0010154: fruit development	1.24E-02
123	GO:0006885: regulation of pH	1.24E-02
124	GO:0006814: sodium ion transport	1.30E-02
125	GO:0006623: protein targeting to vacuole	1.37E-02
126	GO:0006891: intra-Golgi vesicle-mediated transport	1.43E-02
127	GO:0031047: gene silencing by RNA	1.50E-02
128	GO:0009567: double fertilization forming a zygote and endosperm	1.64E-02
129	GO:0001666: response to hypoxia	1.86E-02
130	GO:0009607: response to biotic stimulus	1.94E-02
131	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.94E-02
132	GO:0009816: defense response to bacterium, incompatible interaction	1.94E-02
133	GO:0042128: nitrate assimilation	2.01E-02
134	GO:0006950: response to stress	2.09E-02
135	GO:0006888: ER to Golgi vesicle-mediated transport	2.09E-02
136	GO:0055085: transmembrane transport	2.10E-02
137	GO:0016311: dephosphorylation	2.17E-02
138	GO:0016049: cell growth	2.17E-02
139	GO:0008219: cell death	2.25E-02
140	GO:0030244: cellulose biosynthetic process	2.25E-02
141	GO:0009813: flavonoid biosynthetic process	2.33E-02
142	GO:0010311: lateral root formation	2.33E-02
143	GO:0010200: response to chitin	2.53E-02
144	GO:0045087: innate immune response	2.66E-02
145	GO:0006099: tricarboxylic acid cycle	2.75E-02
146	GO:0006839: mitochondrial transport	2.92E-02
147	GO:0009737: response to abscisic acid	3.17E-02
148	GO:0009640: photomorphogenesis	3.19E-02
149	GO:0009636: response to toxic substance	3.47E-02
150	GO:0009846: pollen germination	3.75E-02
151	GO:0009585: red, far-red light phototransduction	3.94E-02
152	GO:0008152: metabolic process	3.96E-02
153	GO:0006417: regulation of translation	4.24E-02
154	GO:0009873: ethylene-activated signaling pathway	4.63E-02
155	GO:0009626: plant-type hypersensitive response	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
2	GO:0004107: chorismate synthase activity	0.00E+00
3	GO:0052694: jasmonoyl-isoleucine-12-hydroxylase activity	0.00E+00
4	GO:0046409: p-coumarate 3-hydroxylase activity	0.00E+00
5	GO:0050373: UDP-arabinose 4-epimerase activity	6.54E-08
6	GO:0003978: UDP-glucose 4-epimerase activity	5.20E-07
7	GO:0051082: unfolded protein binding	1.19E-04
8	GO:0008142: oxysterol binding	1.27E-04
9	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.46E-04
10	GO:0080025: phosphatidylinositol-3,5-bisphosphate binding	1.46E-04
11	GO:0032266: phosphatidylinositol-3-phosphate binding	1.46E-04
12	GO:0019784: NEDD8-specific protease activity	1.46E-04
13	GO:0005090: Sar guanyl-nucleotide exchange factor activity	1.46E-04
14	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	3.33E-04
15	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	3.33E-04
16	GO:0032934: sterol binding	3.33E-04
17	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	3.33E-04
18	GO:0050736: O-malonyltransferase activity	3.33E-04
19	GO:0031072: heat shock protein binding	3.41E-04
20	GO:0003729: mRNA binding	3.81E-04
21	GO:0005524: ATP binding	4.28E-04
22	GO:0003979: UDP-glucose 6-dehydrogenase activity	5.47E-04
23	GO:0019948: SUMO activating enzyme activity	5.47E-04
24	GO:0045548: phenylalanine ammonia-lyase activity	5.47E-04
25	GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity	5.47E-04
26	GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity	7.83E-04
27	GO:0004445: inositol-polyphosphate 5-phosphatase activity	7.83E-04
28	GO:0005432: calcium:sodium antiporter activity	7.83E-04
29	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.04E-03
30	GO:0000062: fatty-acyl-CoA binding	1.04E-03
31	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.27E-03
32	GO:0005471: ATP:ADP antiporter activity	1.31E-03
33	GO:0002020: protease binding	1.31E-03
34	GO:0016929: SUMO-specific protease activity	1.31E-03
35	GO:0051015: actin filament binding	1.44E-03
36	GO:0005515: protein binding	1.52E-03
37	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.61E-03
38	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.61E-03
39	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.61E-03
40	GO:0015297: antiporter activity	1.88E-03
41	GO:0051020: GTPase binding	1.93E-03
42	GO:0004012: phospholipid-translocating ATPase activity	1.93E-03
43	GO:0051753: mannan synthase activity	1.93E-03
44	GO:0052747: sinapyl alcohol dehydrogenase activity	2.63E-03
45	GO:0015491: cation:cation antiporter activity	2.63E-03
46	GO:0042802: identical protein binding	2.71E-03
47	GO:0016207: 4-coumarate-CoA ligase activity	3.40E-03
48	GO:0015112: nitrate transmembrane transporter activity	3.81E-03
49	GO:0015020: glucuronosyltransferase activity	4.23E-03
50	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.13E-03
51	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	5.13E-03
52	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.60E-03
53	GO:0004022: alcohol dehydrogenase (NAD) activity	5.60E-03
54	GO:0004175: endopeptidase activity	6.09E-03
55	GO:0003779: actin binding	7.11E-03
56	GO:0016746: transferase activity, transferring acyl groups	7.54E-03
57	GO:0005528: FK506 binding	7.63E-03
58	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.73E-03
59	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	8.73E-03
60	GO:0016760: cellulose synthase (UDP-forming) activity	9.89E-03
61	GO:0005451: monovalent cation:proton antiporter activity	1.17E-02
62	GO:0001085: RNA polymerase II transcription factor binding	1.24E-02
63	GO:0015299: solute:proton antiporter activity	1.30E-02
64	GO:0010181: FMN binding	1.30E-02
65	GO:0016887: ATPase activity	1.31E-02
66	GO:0003743: translation initiation factor activity	1.48E-02
67	GO:0004518: nuclease activity	1.50E-02
68	GO:0015385: sodium:proton antiporter activity	1.57E-02
69	GO:0016759: cellulose synthase activity	1.64E-02
70	GO:0016791: phosphatase activity	1.64E-02
71	GO:0008375: acetylglucosaminyltransferase activity	2.01E-02
72	GO:0005096: GTPase activator activity	2.33E-02
73	GO:0004497: monooxygenase activity	2.44E-02
74	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.49E-02
75	GO:0005516: calmodulin binding	2.59E-02
76	GO:0050661: NADP binding	2.92E-02
77	GO:0016301: kinase activity	3.03E-02
78	GO:0035091: phosphatidylinositol binding	3.37E-02
79	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.56E-02
80	GO:0003723: RNA binding	3.58E-02
81	GO:0051287: NAD binding	3.65E-02
82	GO:0005506: iron ion binding	3.68E-02
83	GO:0003824: catalytic activity	4.20E-02
84	GO:0008234: cysteine-type peptidase activity	4.24E-02
85	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.75E-02
86	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.75E-02
87	GO:0016874: ligase activity	4.85E-02
88	GO:0008289: lipid binding	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.50E-06
2	GO:0005884: actin filament	6.50E-06
3	GO:0005829: cytosol	6.77E-06
4	GO:0005774: vacuolar membrane	5.01E-05
5	GO:0005737: cytoplasm	9.44E-05
6	GO:0032580: Golgi cisterna membrane	1.25E-04
7	GO:0030688: preribosome, small subunit precursor	1.46E-04
8	GO:0045252: oxoglutarate dehydrogenase complex	1.46E-04
9	GO:0016442: RISC complex	1.46E-04
10	GO:0005794: Golgi apparatus	1.46E-04
11	GO:0032432: actin filament bundle	7.83E-04
12	GO:0030173: integral component of Golgi membrane	1.93E-03
13	GO:0010369: chromocenter	1.93E-03
14	GO:0016363: nuclear matrix	1.93E-03
15	GO:0009506: plasmodesma	2.89E-03
16	GO:0005618: cell wall	3.30E-03
17	GO:0010494: cytoplasmic stress granule	3.40E-03
18	GO:0008180: COP9 signalosome	3.40E-03
19	GO:0005783: endoplasmic reticulum	4.06E-03
20	GO:0005740: mitochondrial envelope	4.23E-03
21	GO:0048471: perinuclear region of cytoplasm	4.67E-03
22	GO:0005938: cell cortex	5.60E-03
23	GO:0005795: Golgi stack	6.59E-03
24	GO:0030176: integral component of endoplasmic reticulum membrane	6.59E-03
25	GO:0005730: nucleolus	6.65E-03
26	GO:0043234: protein complex	7.10E-03
27	GO:0005802: trans-Golgi network	7.20E-03
28	GO:0005768: endosome	8.74E-03
29	GO:0009524: phragmoplast	9.67E-03
30	GO:0009504: cell plate	1.37E-02
31	GO:0031965: nuclear membrane	1.37E-02
32	GO:0071944: cell periphery	1.57E-02
33	GO:0000932: P-body	1.86E-02
34	GO:0030529: intracellular ribonucleoprotein complex	1.86E-02
35	GO:0016021: integral component of membrane	1.91E-02
36	GO:0005667: transcription factor complex	2.01E-02
37	GO:0031902: late endosome membrane	3.01E-02
38	GO:0005622: intracellular	3.19E-02
39	GO:0090406: pollen tube	3.19E-02
40	GO:0005743: mitochondrial inner membrane	3.35E-02
41	GO:0005856: cytoskeleton	3.47E-02
42	GO:0043231: intracellular membrane-bounded organelle	3.96E-02
43	GO:0005635: nuclear envelope	4.14E-02
44	GO:0010008: endosome membrane	4.54E-02
45	GO:0005834: heterotrimeric G-protein complex	4.65E-02
46	GO:0012505: endomembrane system	4.96E-02