GO Enrichment Analysis of Co-expressed Genes with
AT5G22330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 5 | GO:0006412: translation | 8.92E-49 |
| 6 | GO:0000027: ribosomal large subunit assembly | 7.64E-09 |
| 7 | GO:0042254: ribosome biogenesis | 4.04E-08 |
| 8 | GO:0006364: rRNA processing | 1.92E-07 |
| 9 | GO:0048569: post-embryonic animal organ development | 1.32E-06 |
| 10 | GO:0008033: tRNA processing | 2.48E-06 |
| 11 | GO:0080156: mitochondrial mRNA modification | 4.70E-06 |
| 12 | GO:0006626: protein targeting to mitochondrion | 1.38E-05 |
| 13 | GO:0031167: rRNA methylation | 3.42E-05 |
| 14 | GO:0006458: 'de novo' protein folding | 7.14E-05 |
| 15 | GO:0000245: spliceosomal complex assembly | 7.14E-05 |
| 16 | GO:0009955: adaxial/abaxial pattern specification | 7.14E-05 |
| 17 | GO:0010197: polar nucleus fusion | 8.78E-05 |
| 18 | GO:0000028: ribosomal small subunit assembly | 1.23E-04 |
| 19 | GO:0001510: RNA methylation | 1.53E-04 |
| 20 | GO:0006407: rRNA export from nucleus | 1.64E-04 |
| 21 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 1.64E-04 |
| 22 | GO:0031120: snRNA pseudouridine synthesis | 1.64E-04 |
| 23 | GO:0000469: cleavage involved in rRNA processing | 1.64E-04 |
| 24 | GO:0031118: rRNA pseudouridine synthesis | 1.64E-04 |
| 25 | GO:0035266: meristem growth | 1.64E-04 |
| 26 | GO:0006434: seryl-tRNA aminoacylation | 1.64E-04 |
| 27 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.64E-04 |
| 28 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.64E-04 |
| 29 | GO:0010162: seed dormancy process | 2.65E-04 |
| 30 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 3.73E-04 |
| 31 | GO:0045041: protein import into mitochondrial intermembrane space | 3.73E-04 |
| 32 | GO:0009967: positive regulation of signal transduction | 3.73E-04 |
| 33 | GO:0008283: cell proliferation | 5.53E-04 |
| 34 | GO:0042256: mature ribosome assembly | 6.11E-04 |
| 35 | GO:0030150: protein import into mitochondrial matrix | 6.27E-04 |
| 36 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.27E-04 |
| 37 | GO:0061077: chaperone-mediated protein folding | 7.57E-04 |
| 38 | GO:0007004: telomere maintenance via telomerase | 8.73E-04 |
| 39 | GO:0006164: purine nucleotide biosynthetic process | 8.73E-04 |
| 40 | GO:0009855: determination of bilateral symmetry | 8.73E-04 |
| 41 | GO:0009735: response to cytokinin | 8.92E-04 |
| 42 | GO:0009294: DNA mediated transformation | 8.97E-04 |
| 43 | GO:0042273: ribosomal large subunit biogenesis | 1.16E-03 |
| 44 | GO:0009553: embryo sac development | 1.20E-03 |
| 45 | GO:0001731: formation of translation preinitiation complex | 1.80E-03 |
| 46 | GO:0000470: maturation of LSU-rRNA | 1.80E-03 |
| 47 | GO:0016554: cytidine to uridine editing | 1.80E-03 |
| 48 | GO:0000741: karyogamy | 1.80E-03 |
| 49 | GO:0016444: somatic cell DNA recombination | 2.17E-03 |
| 50 | GO:0042026: protein refolding | 2.17E-03 |
| 51 | GO:0080186: developmental vegetative growth | 2.55E-03 |
| 52 | GO:0010311: lateral root formation | 2.93E-03 |
| 53 | GO:0050821: protein stabilization | 2.95E-03 |
| 54 | GO:0001522: pseudouridine synthesis | 2.95E-03 |
| 55 | GO:0001558: regulation of cell growth | 3.37E-03 |
| 56 | GO:0006189: 'de novo' IMP biosynthetic process | 3.81E-03 |
| 57 | GO:0007338: single fertilization | 3.81E-03 |
| 58 | GO:0010449: root meristem growth | 4.27E-03 |
| 59 | GO:0000387: spliceosomal snRNP assembly | 4.27E-03 |
| 60 | GO:0045036: protein targeting to chloroplast | 4.75E-03 |
| 61 | GO:0009965: leaf morphogenesis | 5.09E-03 |
| 62 | GO:0010015: root morphogenesis | 5.25E-03 |
| 63 | GO:0006913: nucleocytoplasmic transport | 5.25E-03 |
| 64 | GO:0006820: anion transport | 5.77E-03 |
| 65 | GO:2000012: regulation of auxin polar transport | 6.30E-03 |
| 66 | GO:0006446: regulation of translational initiation | 6.85E-03 |
| 67 | GO:0010073: meristem maintenance | 9.21E-03 |
| 68 | GO:0051302: regulation of cell division | 9.21E-03 |
| 69 | GO:0006334: nucleosome assembly | 9.84E-03 |
| 70 | GO:0000398: mRNA splicing, via spliceosome | 1.00E-02 |
| 71 | GO:0007005: mitochondrion organization | 1.05E-02 |
| 72 | GO:0071215: cellular response to abscisic acid stimulus | 1.11E-02 |
| 73 | GO:0009960: endosperm development | 1.39E-02 |
| 74 | GO:0010305: leaf vascular tissue pattern formation | 1.39E-02 |
| 75 | GO:0006635: fatty acid beta-oxidation | 1.62E-02 |
| 76 | GO:0009567: double fertilization forming a zygote and endosperm | 1.86E-02 |
| 77 | GO:0015031: protein transport | 1.91E-02 |
| 78 | GO:0016579: protein deubiquitination | 2.02E-02 |
| 79 | GO:0006811: ion transport | 2.72E-02 |
| 80 | GO:0000724: double-strand break repair via homologous recombination | 2.91E-02 |
| 81 | GO:0000154: rRNA modification | 3.91E-02 |
| 82 | GO:0009793: embryo development ending in seed dormancy | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 3 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 1.90E-58 |
| 5 | GO:0003723: RNA binding | 7.48E-12 |
| 6 | GO:0003729: mRNA binding | 2.31E-11 |
| 7 | GO:0019843: rRNA binding | 1.69E-09 |
| 8 | GO:0030515: snoRNA binding | 6.46E-09 |
| 9 | GO:0008649: rRNA methyltransferase activity | 4.89E-06 |
| 10 | GO:0044183: protein binding involved in protein folding | 8.67E-06 |
| 11 | GO:0008097: 5S rRNA binding | 1.14E-05 |
| 12 | GO:0016817: hydrolase activity, acting on acid anhydrides | 1.64E-04 |
| 13 | GO:0004828: serine-tRNA ligase activity | 1.64E-04 |
| 14 | GO:0000166: nucleotide binding | 2.18E-04 |
| 15 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 3.73E-04 |
| 16 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 3.73E-04 |
| 17 | GO:0070034: telomerase RNA binding | 3.73E-04 |
| 18 | GO:0005078: MAP-kinase scaffold activity | 3.73E-04 |
| 19 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 3.73E-04 |
| 20 | GO:0003746: translation elongation factor activity | 4.00E-04 |
| 21 | GO:0008469: histone-arginine N-methyltransferase activity | 6.11E-04 |
| 22 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 6.11E-04 |
| 23 | GO:0004407: histone deacetylase activity | 6.27E-04 |
| 24 | GO:0051082: unfolded protein binding | 1.24E-03 |
| 25 | GO:0004888: transmembrane signaling receptor activity | 1.47E-03 |
| 26 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.80E-03 |
| 27 | GO:0031369: translation initiation factor binding | 1.80E-03 |
| 28 | GO:0008235: metalloexopeptidase activity | 2.55E-03 |
| 29 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.78E-03 |
| 30 | GO:0015288: porin activity | 2.95E-03 |
| 31 | GO:0008308: voltage-gated anion channel activity | 3.37E-03 |
| 32 | GO:0000049: tRNA binding | 5.77E-03 |
| 33 | GO:0015266: protein channel activity | 6.30E-03 |
| 34 | GO:0051087: chaperone binding | 9.21E-03 |
| 35 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 9.84E-03 |
| 36 | GO:0010181: FMN binding | 1.47E-02 |
| 37 | GO:0008237: metallopeptidase activity | 1.94E-02 |
| 38 | GO:0050897: cobalt ion binding | 2.82E-02 |
| 39 | GO:0008233: peptidase activity | 2.85E-02 |
| 40 | GO:0003697: single-stranded DNA binding | 3.01E-02 |
| 41 | GO:0042393: histone binding | 3.30E-02 |
| 42 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.30E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 2 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 3 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 4 | GO:0022626: cytosolic ribosome | 1.01E-38 |
| 5 | GO:0005840: ribosome | 5.32E-32 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 1.75E-29 |
| 7 | GO:0005730: nucleolus | 8.07E-25 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 1.65E-22 |
| 9 | GO:0015934: large ribosomal subunit | 1.98E-15 |
| 10 | GO:0005829: cytosol | 5.85E-15 |
| 11 | GO:0009506: plasmodesma | 1.13E-10 |
| 12 | GO:0015030: Cajal body | 4.92E-08 |
| 13 | GO:0031428: box C/D snoRNP complex | 4.01E-07 |
| 14 | GO:0005737: cytoplasm | 7.12E-07 |
| 15 | GO:0005773: vacuole | 7.52E-07 |
| 16 | GO:0005774: vacuolar membrane | 3.26E-06 |
| 17 | GO:0032040: small-subunit processome | 1.10E-05 |
| 18 | GO:0015935: small ribosomal subunit | 4.05E-05 |
| 19 | GO:0016020: membrane | 1.13E-04 |
| 20 | GO:0030686: 90S preribosome | 1.64E-04 |
| 21 | GO:0005739: mitochondrion | 2.49E-04 |
| 22 | GO:0071010: prespliceosome | 3.73E-04 |
| 23 | GO:0034719: SMN-Sm protein complex | 6.11E-04 |
| 24 | GO:0034715: pICln-Sm protein complex | 6.11E-04 |
| 25 | GO:0031429: box H/ACA snoRNP complex | 8.73E-04 |
| 26 | GO:0005682: U5 snRNP | 1.16E-03 |
| 27 | GO:0005687: U4 snRNP | 1.47E-03 |
| 28 | GO:0097526: spliceosomal tri-snRNP complex | 1.47E-03 |
| 29 | GO:0000243: commitment complex | 1.80E-03 |
| 30 | GO:0016282: eukaryotic 43S preinitiation complex | 1.80E-03 |
| 31 | GO:0030529: intracellular ribonucleoprotein complex | 2.14E-03 |
| 32 | GO:0033290: eukaryotic 48S preinitiation complex | 2.17E-03 |
| 33 | GO:0005689: U12-type spliceosomal complex | 2.17E-03 |
| 34 | GO:0016272: prefoldin complex | 2.17E-03 |
| 35 | GO:0009507: chloroplast | 2.87E-03 |
| 36 | GO:0046930: pore complex | 3.37E-03 |
| 37 | GO:0005742: mitochondrial outer membrane translocase complex | 3.37E-03 |
| 38 | GO:0005685: U1 snRNP | 3.81E-03 |
| 39 | GO:0071011: precatalytic spliceosome | 4.27E-03 |
| 40 | GO:0016604: nuclear body | 4.27E-03 |
| 41 | GO:0005686: U2 snRNP | 4.75E-03 |
| 42 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.84E-03 |
| 43 | GO:0071013: catalytic step 2 spliceosome | 5.25E-03 |
| 44 | GO:0048471: perinuclear region of cytoplasm | 5.25E-03 |
| 45 | GO:0005852: eukaryotic translation initiation factor 3 complex | 5.25E-03 |
| 46 | GO:0005747: mitochondrial respiratory chain complex I | 7.44E-03 |
| 47 | GO:0005834: heterotrimeric G-protein complex | 7.68E-03 |
| 48 | GO:0005743: mitochondrial inner membrane | 8.47E-03 |
| 49 | GO:0005758: mitochondrial intermembrane space | 8.59E-03 |
| 50 | GO:0005732: small nucleolar ribonucleoprotein complex | 9.47E-03 |
| 51 | GO:0005741: mitochondrial outer membrane | 9.84E-03 |
| 52 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.18E-02 |
| 53 | GO:0005759: mitochondrial matrix | 1.37E-02 |
| 54 | GO:0005618: cell wall | 1.39E-02 |
| 55 | GO:0016592: mediator complex | 1.70E-02 |
| 56 | GO:0009536: plastid | 1.81E-02 |
| 57 | GO:0009707: chloroplast outer membrane | 2.54E-02 |
| 58 | GO:0005622: intracellular | 3.94E-02 |