co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G22080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046085: adenosine metabolic process	0.00E+00
2	GO:0001881: receptor recycling	0.00E+00
3	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
4	GO:0001789: G-protein coupled receptor signaling pathway, coupled to S1P second messenger	0.00E+00
5	GO:0006511: ubiquitin-dependent protein catabolic process	1.06E-14
6	GO:0008333: endosome to lysosome transport	5.74E-06
7	GO:0051603: proteolysis involved in cellular protein catabolic process	7.49E-06
8	GO:0043248: proteasome assembly	5.89E-05
9	GO:0042147: retrograde transport, endosome to Golgi	8.36E-05
10	GO:2001006: regulation of cellulose biosynthetic process	1.80E-04
11	GO:0009240: isopentenyl diphosphate biosynthetic process	1.80E-04
12	GO:0016925: protein sumoylation	4.00E-04
13	GO:0006432: phenylalanyl-tRNA aminoacylation	4.05E-04
14	GO:0045905: positive regulation of translational termination	4.05E-04
15	GO:0071668: plant-type cell wall assembly	4.05E-04
16	GO:0050992: dimethylallyl diphosphate biosynthetic process	4.05E-04
17	GO:0045901: positive regulation of translational elongation	4.05E-04
18	GO:0006452: translational frameshifting	4.05E-04
19	GO:0051788: response to misfolded protein	4.05E-04
20	GO:0010043: response to zinc ion	4.17E-04
21	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	5.67E-04
22	GO:0046417: chorismate metabolic process	6.61E-04
23	GO:0006760: folic acid-containing compound metabolic process	6.61E-04
24	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.61E-04
25	GO:1902626: assembly of large subunit precursor of preribosome	6.61E-04
26	GO:0006406: mRNA export from nucleus	7.06E-04
27	GO:0006487: protein N-linked glycosylation	7.06E-04
28	GO:0016226: iron-sulfur cluster assembly	9.27E-04
29	GO:0006168: adenine salvage	9.45E-04
30	GO:0006166: purine ribonucleoside salvage	9.45E-04
31	GO:0006571: tyrosine biosynthetic process	9.45E-04
32	GO:0006107: oxaloacetate metabolic process	9.45E-04
33	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	9.45E-04
34	GO:0009647: skotomorphogenesis	9.45E-04
35	GO:0009755: hormone-mediated signaling pathway	1.25E-03
36	GO:0010363: regulation of plant-type hypersensitive response	1.25E-03
37	GO:0015991: ATP hydrolysis coupled proton transport	1.27E-03
38	GO:0048825: cotyledon development	1.57E-03
39	GO:0009749: response to glucose	1.57E-03
40	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.59E-03
41	GO:0044209: AMP salvage	1.59E-03
42	GO:0000398: mRNA splicing, via spliceosome	1.74E-03
43	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.96E-03
44	GO:0006555: methionine metabolic process	1.96E-03
45	GO:0019509: L-methionine salvage from methylthioadenosine	2.35E-03
46	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.35E-03
47	GO:0009094: L-phenylalanine biosynthetic process	2.35E-03
48	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	2.35E-03
49	GO:0048528: post-embryonic root development	2.77E-03
50	GO:0046686: response to cadmium ion	2.86E-03
51	GO:0009690: cytokinin metabolic process	3.21E-03
52	GO:0000028: ribosomal small subunit assembly	3.21E-03
53	GO:0031540: regulation of anthocyanin biosynthetic process	3.21E-03
54	GO:0006506: GPI anchor biosynthetic process	3.21E-03
55	GO:0006499: N-terminal protein myristoylation	3.47E-03
56	GO:0010204: defense response signaling pathway, resistance gene-independent	3.67E-03
57	GO:0009808: lignin metabolic process	3.67E-03
58	GO:0010099: regulation of photomorphogenesis	3.67E-03
59	GO:0022900: electron transport chain	3.67E-03
60	GO:0007186: G-protein coupled receptor signaling pathway	3.67E-03
61	GO:0009853: photorespiration	3.98E-03
62	GO:0006754: ATP biosynthetic process	4.15E-03
63	GO:0048589: developmental growth	4.15E-03
64	GO:0009245: lipid A biosynthetic process	4.15E-03
65	GO:0010267: production of ta-siRNAs involved in RNA interference	4.65E-03
66	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.18E-03
67	GO:0000103: sulfate assimilation	5.18E-03
68	GO:0043069: negative regulation of programmed cell death	5.18E-03
69	GO:0045036: protein targeting to chloroplast	5.18E-03
70	GO:0000209: protein polyubiquitination	5.33E-03
71	GO:0016485: protein processing	5.72E-03
72	GO:0010015: root morphogenesis	5.72E-03
73	GO:0072593: reactive oxygen species metabolic process	5.72E-03
74	GO:0009073: aromatic amino acid family biosynthetic process	5.72E-03
75	GO:0006108: malate metabolic process	6.86E-03
76	GO:0009785: blue light signaling pathway	6.86E-03
77	GO:0006807: nitrogen compound metabolic process	6.86E-03
78	GO:0048467: gynoecium development	7.46E-03
79	GO:0002237: response to molecule of bacterial origin	7.46E-03
80	GO:0007034: vacuolar transport	7.46E-03
81	GO:0010039: response to iron ion	8.08E-03
82	GO:0006886: intracellular protein transport	8.67E-03
83	GO:0042753: positive regulation of circadian rhythm	8.71E-03
84	GO:2000377: regulation of reactive oxygen species metabolic process	9.37E-03
85	GO:0009116: nucleoside metabolic process	9.37E-03
86	GO:0000027: ribosomal large subunit assembly	9.37E-03
87	GO:0051302: regulation of cell division	1.00E-02
88	GO:0008299: isoprenoid biosynthetic process	1.00E-02
89	GO:0015992: proton transport	1.07E-02
90	GO:0051260: protein homooligomerization	1.07E-02
91	GO:0010431: seed maturation	1.07E-02
92	GO:0030433: ubiquitin-dependent ERAD pathway	1.14E-02
93	GO:0006012: galactose metabolic process	1.22E-02
94	GO:0071215: cellular response to abscisic acid stimulus	1.22E-02
95	GO:0042127: regulation of cell proliferation	1.29E-02
96	GO:0010089: xylem development	1.29E-02
97	GO:0019722: calcium-mediated signaling	1.29E-02
98	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.37E-02
99	GO:0000413: protein peptidyl-prolyl isomerization	1.44E-02
100	GO:0006662: glycerol ether metabolic process	1.52E-02
101	GO:0010182: sugar mediated signaling pathway	1.52E-02
102	GO:0010154: fruit development	1.52E-02
103	GO:0015986: ATP synthesis coupled proton transport	1.60E-02
104	GO:0006623: protein targeting to vacuole	1.68E-02
105	GO:0007623: circadian rhythm	1.71E-02
106	GO:0080156: mitochondrial mRNA modification	1.77E-02
107	GO:0031047: gene silencing by RNA	1.85E-02
108	GO:0030163: protein catabolic process	1.94E-02
109	GO:0006914: autophagy	2.03E-02
110	GO:0010286: heat acclimation	2.11E-02
111	GO:0010027: thylakoid membrane organization	2.30E-02
112	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.39E-02
113	GO:0048573: photoperiodism, flowering	2.58E-02
114	GO:0015995: chlorophyll biosynthetic process	2.58E-02
115	GO:0006888: ER to Golgi vesicle-mediated transport	2.58E-02
116	GO:0042254: ribosome biogenesis	2.69E-02
117	GO:0008219: cell death	2.77E-02
118	GO:0009817: defense response to fungus, incompatible interaction	2.77E-02
119	GO:0009631: cold acclimation	3.08E-02
120	GO:0010119: regulation of stomatal movement	3.08E-02
121	GO:0048366: leaf development	3.11E-02
122	GO:0000724: double-strand break repair via homologous recombination	3.18E-02
123	GO:0045087: innate immune response	3.28E-02
124	GO:0034599: cellular response to oxidative stress	3.39E-02
125	GO:0016192: vesicle-mediated transport	3.44E-02
126	GO:0045454: cell redox homeostasis	3.91E-02
127	GO:0000154: rRNA modification	4.27E-02
128	GO:0009408: response to heat	4.81E-02
129	GO:0009736: cytokinin-activated signaling pathway	4.86E-02
130	GO:0006486: protein glycosylation	4.86E-02
131	GO:0009585: red, far-red light phototransduction	4.86E-02
132	GO:0006813: potassium ion transport	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0050152: omega-amidase activity	0.00E+00
2	GO:0016247: channel regulator activity	0.00E+00
3	GO:0005095: GTPase inhibitor activity	0.00E+00
4	GO:0061799: cyclic pyranopterin monophosphate synthase activity	0.00E+00
5	GO:0004298: threonine-type endopeptidase activity	3.49E-26
6	GO:0008233: peptidase activity	5.58E-16
7	GO:0004576: oligosaccharyl transferase activity	2.45E-05
8	GO:0031386: protein tag	3.97E-05
9	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.97E-05
10	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.44E-04
11	GO:0019707: protein-cysteine S-acyltransferase activity	1.80E-04
12	GO:0030941: chloroplast targeting sequence binding	1.80E-04
13	GO:0004452: isopentenyl-diphosphate delta-isomerase activity	1.80E-04
14	GO:0004826: phenylalanine-tRNA ligase activity	4.05E-04
15	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	4.05E-04
16	GO:1990585: hydroxyproline O-arabinosyltransferase activity	4.05E-04
17	GO:0004106: chorismate mutase activity	4.05E-04
18	GO:0050897: cobalt ion binding	4.17E-04
19	GO:0008649: rRNA methyltransferase activity	6.61E-04
20	GO:0001664: G-protein coupled receptor binding	6.61E-04
21	GO:0008430: selenium binding	6.61E-04
22	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	6.61E-04
23	GO:0005047: signal recognition particle binding	6.61E-04
24	GO:0031683: G-protein beta/gamma-subunit complex binding	6.61E-04
25	GO:0003999: adenine phosphoribosyltransferase activity	9.45E-04
26	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.25E-03
27	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.25E-03
28	GO:0005496: steroid binding	1.59E-03
29	GO:0008198: ferrous iron binding	1.59E-03
30	GO:0031177: phosphopantetheine binding	1.96E-03
31	GO:0004602: glutathione peroxidase activity	2.35E-03
32	GO:0019887: protein kinase regulator activity	2.35E-03
33	GO:0051020: GTPase binding	2.35E-03
34	GO:0000035: acyl binding	2.35E-03
35	GO:0008143: poly(A) binding	2.77E-03
36	GO:0008320: protein transmembrane transporter activity	2.77E-03
37	GO:0008235: metalloexopeptidase activity	2.77E-03
38	GO:0042162: telomeric DNA binding	2.77E-03
39	GO:0043022: ribosome binding	3.21E-03
40	GO:0035064: methylated histone binding	3.21E-03
41	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.21E-03
42	GO:0004034: aldose 1-epimerase activity	3.21E-03
43	GO:0015078: hydrogen ion transmembrane transporter activity	3.67E-03
44	GO:0003746: translation elongation factor activity	3.98E-03
45	GO:0003697: single-stranded DNA binding	3.98E-03
46	GO:0001055: RNA polymerase II activity	4.65E-03
47	GO:0051537: 2 iron, 2 sulfur cluster binding	5.54E-03
48	GO:0043621: protein self-association	5.54E-03
49	GO:0046961: proton-transporting ATPase activity, rotational mechanism	5.72E-03
50	GO:0001054: RNA polymerase I activity	5.72E-03
51	GO:0004177: aminopeptidase activity	5.72E-03
52	GO:0004129: cytochrome-c oxidase activity	5.72E-03
53	GO:0008794: arsenate reductase (glutaredoxin) activity	5.72E-03
54	GO:0001056: RNA polymerase III activity	6.28E-03
55	GO:0000049: tRNA binding	6.28E-03
56	GO:0031625: ubiquitin protein ligase binding	7.64E-03
57	GO:0004722: protein serine/threonine phosphatase activity	9.37E-03
58	GO:0003714: transcription corepressor activity	9.37E-03
59	GO:0015035: protein disulfide oxidoreductase activity	1.01E-02
60	GO:0047134: protein-disulfide reductase activity	1.37E-02
61	GO:0005249: voltage-gated potassium channel activity	1.44E-02
62	GO:0003735: structural constituent of ribosome	1.47E-02
63	GO:0008565: protein transporter activity	1.48E-02
64	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	1.52E-02
65	GO:0008080: N-acetyltransferase activity	1.52E-02
66	GO:0004791: thioredoxin-disulfide reductase activity	1.60E-02
67	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.94E-02
68	GO:0000166: nucleotide binding	2.25E-02
69	GO:0004842: ubiquitin-protein transferase activity	2.59E-02
70	GO:0005515: protein binding	3.38E-02
71	GO:0061630: ubiquitin protein ligase activity	3.44E-02
72	GO:0005507: copper ion binding	3.49E-02
73	GO:0042393: histone binding	3.60E-02
74	GO:0051539: 4 iron, 4 sulfur cluster binding	3.60E-02
75	GO:0005198: structural molecule activity	4.27E-02
76	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.39E-02
77	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0019774: proteasome core complex, beta-subunit complex	0.00E+00
2	GO:0097361: CIA complex	0.00E+00
3	GO:0000502: proteasome complex	1.07E-26
4	GO:0005839: proteasome core complex	3.49E-26
5	GO:0019773: proteasome core complex, alpha-subunit complex	5.59E-13
6	GO:0005829: cytosol	1.21E-09
7	GO:0030904: retromer complex	5.00E-07
8	GO:0005747: mitochondrial respiratory chain complex I	5.30E-07
9	GO:0008250: oligosaccharyltransferase complex	3.97E-05
10	GO:0005771: multivesicular body	5.89E-05
11	GO:0005737: cytoplasm	5.95E-05
12	GO:0005662: DNA replication factor A complex	1.80E-04
13	GO:0071011: precatalytic spliceosome	2.55E-04
14	GO:0022626: cytosolic ribosome	2.60E-04
15	GO:0071013: catalytic step 2 spliceosome	3.48E-04
16	GO:0008541: proteasome regulatory particle, lid subcomplex	3.48E-04
17	GO:0005697: telomerase holoenzyme complex	4.05E-04
18	GO:0005774: vacuolar membrane	5.08E-04
19	GO:0005753: mitochondrial proton-transporting ATP synthase complex	5.74E-04
20	GO:0031902: late endosome membrane	5.83E-04
21	GO:0005838: proteasome regulatory particle	6.61E-04
22	GO:0005853: eukaryotic translation elongation factor 1 complex	6.61E-04
23	GO:0045271: respiratory chain complex I	7.77E-04
24	GO:0005956: protein kinase CK2 complex	9.45E-04
25	GO:0033180: proton-transporting V-type ATPase, V1 domain	9.45E-04
26	GO:0008076: voltage-gated potassium channel complex	9.45E-04
27	GO:1990726: Lsm1-7-Pat1 complex	9.45E-04
28	GO:0000445: THO complex part of transcription export complex	1.25E-03
29	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.25E-03
30	GO:0033179: proton-transporting V-type ATPase, V0 domain	1.25E-03
31	GO:0005773: vacuole	1.54E-03
32	GO:0005746: mitochondrial respiratory chain	1.59E-03
33	GO:0005732: small nucleolar ribonucleoprotein complex	1.62E-03
34	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	1.96E-03
35	GO:0000974: Prp19 complex	1.96E-03
36	GO:0005801: cis-Golgi network	2.35E-03
37	GO:0005759: mitochondrial matrix	2.57E-03
38	GO:0031359: integral component of chloroplast outer membrane	2.77E-03
39	GO:0000347: THO complex	2.77E-03
40	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.77E-03
41	GO:0005794: Golgi apparatus	2.79E-03
42	GO:0005688: U6 snRNP	3.21E-03
43	GO:0000421: autophagosome membrane	3.21E-03
44	GO:0005730: nucleolus	3.37E-03
45	GO:0046540: U4/U6 x U5 tri-snRNP complex	3.67E-03
46	GO:0005763: mitochondrial small ribosomal subunit	4.15E-03
47	GO:0005736: DNA-directed RNA polymerase I complex	4.15E-03
48	GO:0005666: DNA-directed RNA polymerase III complex	4.65E-03
49	GO:0005665: DNA-directed RNA polymerase II, core complex	6.28E-03
50	GO:0031966: mitochondrial membrane	6.43E-03
51	GO:0009508: plastid chromosome	6.86E-03
52	GO:0005834: heterotrimeric G-protein complex	8.70E-03
53	GO:0000419: DNA-directed RNA polymerase V complex	8.71E-03
54	GO:0005789: endoplasmic reticulum membrane	9.33E-03
55	GO:0070469: respiratory chain	1.00E-02
56	GO:0031410: cytoplasmic vesicle	1.14E-02
57	GO:0005840: ribosome	1.72E-02
58	GO:0032580: Golgi cisterna membrane	2.03E-02
59	GO:0005783: endoplasmic reticulum	2.08E-02
60	GO:0009295: nucleoid	2.11E-02
61	GO:0000932: P-body	2.30E-02
62	GO:0005643: nuclear pore	2.77E-02
63	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.90E-02
64	GO:0022625: cytosolic large ribosomal subunit	3.44E-02
65	GO:0005819: spindle	3.50E-02
66	GO:0005622: intracellular	4.58E-02
67	GO:0005768: endosome	4.72E-02