Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G22050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071000: response to magnetism0.00E+00
2GO:0032928: regulation of superoxide anion generation0.00E+00
3GO:0009583: detection of light stimulus0.00E+00
4GO:0010117: photoprotection5.95E-06
5GO:0046283: anthocyanin-containing compound metabolic process5.95E-06
6GO:0034971: histone H3-R17 methylation5.79E-05
7GO:0072387: flavin adenine dinucleotide metabolic process5.79E-05
8GO:0071461: cellular response to redox state5.79E-05
9GO:0034970: histone H3-R2 methylation5.79E-05
10GO:0034972: histone H3-R26 methylation5.79E-05
11GO:0080005: photosystem stoichiometry adjustment1.41E-04
12GO:0010617: circadian regulation of calcium ion oscillation1.41E-04
13GO:0099402: plant organ development1.41E-04
14GO:0016122: xanthophyll metabolic process1.41E-04
15GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine1.41E-04
16GO:0010343: singlet oxygen-mediated programmed cell death1.41E-04
17GO:1901529: positive regulation of anion channel activity1.41E-04
18GO:0048255: mRNA stabilization1.41E-04
19GO:0009150: purine ribonucleotide metabolic process2.40E-04
20GO:0006696: ergosterol biosynthetic process2.40E-04
21GO:1902448: positive regulation of shade avoidance2.40E-04
22GO:1901672: positive regulation of systemic acquired resistance2.40E-04
23GO:0009647: skotomorphogenesis3.49E-04
24GO:1901332: negative regulation of lateral root development3.49E-04
25GO:2001141: regulation of RNA biosynthetic process3.49E-04
26GO:0009963: positive regulation of flavonoid biosynthetic process3.49E-04
27GO:1902347: response to strigolactone4.66E-04
28GO:0034613: cellular protein localization4.66E-04
29GO:0006552: leucine catabolic process4.66E-04
30GO:0009649: entrainment of circadian clock4.66E-04
31GO:0060918: auxin transport7.24E-04
32GO:0010304: PSII associated light-harvesting complex II catabolic process7.24E-04
33GO:1901371: regulation of leaf morphogenesis7.24E-04
34GO:0010310: regulation of hydrogen peroxide metabolic process8.63E-04
35GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.63E-04
36GO:0051510: regulation of unidimensional cell growth1.01E-03
37GO:0009640: photomorphogenesis1.14E-03
38GO:0009704: de-etiolation1.16E-03
39GO:0009231: riboflavin biosynthetic process1.16E-03
40GO:0048564: photosystem I assembly1.16E-03
41GO:0010928: regulation of auxin mediated signaling pathway1.16E-03
42GO:0071482: cellular response to light stimulus1.32E-03
43GO:0022900: electron transport chain1.32E-03
44GO:0046916: cellular transition metal ion homeostasis1.48E-03
45GO:0000373: Group II intron splicing1.48E-03
46GO:0015780: nucleotide-sugar transport1.48E-03
47GO:1900426: positive regulation of defense response to bacterium1.65E-03
48GO:0009638: phototropism1.65E-03
49GO:0006417: regulation of translation1.68E-03
50GO:0006535: cysteine biosynthetic process from serine1.83E-03
51GO:0000103: sulfate assimilation1.83E-03
52GO:0009688: abscisic acid biosynthetic process1.83E-03
53GO:0009641: shade avoidance1.83E-03
54GO:0006352: DNA-templated transcription, initiation2.02E-03
55GO:0006790: sulfur compound metabolic process2.21E-03
56GO:0010075: regulation of meristem growth2.41E-03
57GO:0009785: blue light signaling pathway2.41E-03
58GO:0000162: tryptophan biosynthetic process3.04E-03
59GO:2000377: regulation of reactive oxygen species metabolic process3.26E-03
60GO:0019344: cysteine biosynthetic process3.26E-03
61GO:0007017: microtubule-based process3.49E-03
62GO:0016226: iron-sulfur cluster assembly3.95E-03
63GO:0016117: carotenoid biosynthetic process4.69E-03
64GO:0010118: stomatal movement4.95E-03
65GO:0009958: positive gravitropism5.21E-03
66GO:0042752: regulation of circadian rhythm5.48E-03
67GO:0009646: response to absence of light5.48E-03
68GO:0009658: chloroplast organization5.66E-03
69GO:0009851: auxin biosynthetic process5.75E-03
70GO:0007264: small GTPase mediated signal transduction6.31E-03
71GO:0048573: photoperiodism, flowering8.71E-03
72GO:0030244: cellulose biosynthetic process9.36E-03
73GO:0018298: protein-chromophore linkage9.36E-03
74GO:0010218: response to far red light1.00E-02
75GO:0010119: regulation of stomatal movement1.04E-02
76GO:0009637: response to blue light1.11E-02
77GO:0030001: metal ion transport1.21E-02
78GO:0010114: response to red light1.32E-02
79GO:0009644: response to high light intensity1.40E-02
80GO:0008643: carbohydrate transport1.40E-02
81GO:0009664: plant-type cell wall organization1.55E-02
82GO:0009809: lignin biosynthetic process1.63E-02
83GO:0009585: red, far-red light phototransduction1.63E-02
84GO:0051603: proteolysis involved in cellular protein catabolic process1.67E-02
85GO:0010224: response to UV-B1.67E-02
86GO:0009909: regulation of flower development1.75E-02
87GO:0007623: circadian rhythm3.09E-02
88GO:0009451: RNA modification3.15E-02
89GO:0010228: vegetative to reproductive phase transition of meristem3.20E-02
90GO:0006508: proteolysis3.21E-02
91GO:0009826: unidimensional cell growth4.11E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0046905: phytoene synthase activity0.00E+00
3GO:0004848: ureidoglycolate hydrolase activity7.59E-07
4GO:0004485: methylcrotonoyl-CoA carboxylase activity5.79E-05
5GO:0033984: indole-3-glycerol-phosphate lyase activity5.79E-05
6GO:0051996: squalene synthase activity5.79E-05
7GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.41E-04
8GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity1.41E-04
9GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity1.41E-04
10GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity1.41E-04
11GO:0035241: protein-arginine omega-N monomethyltransferase activity1.41E-04
12GO:0004075: biotin carboxylase activity2.40E-04
13GO:0008469: histone-arginine N-methyltransferase activity2.40E-04
14GO:0004180: carboxypeptidase activity2.40E-04
15GO:0032947: protein complex scaffold2.40E-04
16GO:0019003: GDP binding2.40E-04
17GO:0003935: GTP cyclohydrolase II activity2.40E-04
18GO:0009882: blue light photoreceptor activity3.49E-04
19GO:0047627: adenylylsulfatase activity3.49E-04
20GO:0009001: serine O-acetyltransferase activity3.49E-04
21GO:0001053: plastid sigma factor activity4.66E-04
22GO:0004834: tryptophan synthase activity4.66E-04
23GO:0016987: sigma factor activity4.66E-04
24GO:0016407: acetyltransferase activity5.92E-04
25GO:0005338: nucleotide-sugar transmembrane transporter activity1.01E-03
26GO:0016621: cinnamoyl-CoA reductase activity1.01E-03
27GO:0046914: transition metal ion binding1.32E-03
28GO:0071949: FAD binding1.48E-03
29GO:0031072: heat shock protein binding2.41E-03
30GO:0051536: iron-sulfur cluster binding3.26E-03
31GO:0004176: ATP-dependent peptidase activity3.72E-03
32GO:0042802: identical protein binding4.66E-03
33GO:0008168: methyltransferase activity5.45E-03
34GO:0050662: coenzyme binding5.48E-03
35GO:0004518: nuclease activity6.31E-03
36GO:0008237: metallopeptidase activity7.18E-03
37GO:0003824: catalytic activity8.77E-03
38GO:0042803: protein homodimerization activity8.80E-03
39GO:0008236: serine-type peptidase activity9.03E-03
40GO:0004222: metalloendopeptidase activity1.00E-02
41GO:0050897: cobalt ion binding1.04E-02
42GO:0004712: protein serine/threonine/tyrosine kinase activity1.18E-02
43GO:0004185: serine-type carboxypeptidase activity1.32E-02
44GO:0051537: 2 iron, 2 sulfur cluster binding1.40E-02
45GO:0005198: structural molecule activity1.44E-02
46GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.63E-02
47GO:0003777: microtubule motor activity1.75E-02
48GO:0022857: transmembrane transporter activity2.01E-02
49GO:0051082: unfolded protein binding2.10E-02
50GO:0046872: metal ion binding2.47E-02
51GO:0015297: antiporter activity2.99E-02
52GO:0005525: GTP binding3.04E-02
53GO:0003723: RNA binding3.38E-02
54GO:0046982: protein heterodimerization activity4.17E-02
55GO:0043531: ADP binding4.51E-02
56GO:0016491: oxidoreductase activity4.90E-02
RankGO TermAdjusted P value
1GO:0030427: site of polarized growth0.00E+00
2GO:0009507: chloroplast2.44E-05
3GO:0016604: nuclear body4.74E-05
4GO:0000152: nuclear ubiquitin ligase complex5.79E-05
5GO:0016605: PML body2.40E-04
6GO:0030286: dynein complex4.66E-04
7GO:0009517: PSII associated light-harvesting complex II4.66E-04
8GO:0005875: microtubule associated complex3.04E-03
9GO:0031969: chloroplast membrane7.02E-03
10GO:0030529: intracellular ribonucleoprotein complex7.78E-03
11GO:0009536: plastid1.01E-02
12GO:0005819: spindle1.18E-02
13GO:0031966: mitochondrial membrane1.55E-02
14GO:0010287: plastoglobule2.37E-02
15GO:0005759: mitochondrial matrix2.89E-02
16GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.51E-02
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Gene type



Gene DE type