GO Enrichment Analysis of Co-expressed Genes with
AT5G21930
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 5 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 6 | GO:0019439: aromatic compound catabolic process | 0.00E+00 |
| 7 | GO:0009657: plastid organization | 3.55E-07 |
| 8 | GO:0018298: protein-chromophore linkage | 1.70E-06 |
| 9 | GO:0015979: photosynthesis | 2.03E-05 |
| 10 | GO:1904964: positive regulation of phytol biosynthetic process | 7.23E-05 |
| 11 | GO:0006436: tryptophanyl-tRNA aminoacylation | 7.23E-05 |
| 12 | GO:0006419: alanyl-tRNA aminoacylation | 7.23E-05 |
| 13 | GO:0010362: negative regulation of anion channel activity by blue light | 7.23E-05 |
| 14 | GO:0019285: glycine betaine biosynthetic process from choline | 7.23E-05 |
| 15 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.23E-05 |
| 16 | GO:0071277: cellular response to calcium ion | 7.23E-05 |
| 17 | GO:0031426: polycistronic mRNA processing | 7.23E-05 |
| 18 | GO:1904966: positive regulation of vitamin E biosynthetic process | 7.23E-05 |
| 19 | GO:0006790: sulfur compound metabolic process | 1.10E-04 |
| 20 | GO:0046854: phosphatidylinositol phosphorylation | 1.64E-04 |
| 21 | GO:0042853: L-alanine catabolic process | 1.74E-04 |
| 22 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.74E-04 |
| 23 | GO:0042548: regulation of photosynthesis, light reaction | 1.74E-04 |
| 24 | GO:0080005: photosystem stoichiometry adjustment | 1.74E-04 |
| 25 | GO:0000256: allantoin catabolic process | 1.74E-04 |
| 26 | GO:0006013: mannose metabolic process | 2.93E-04 |
| 27 | GO:0010136: ureide catabolic process | 2.93E-04 |
| 28 | GO:0010239: chloroplast mRNA processing | 4.23E-04 |
| 29 | GO:0006809: nitric oxide biosynthetic process | 4.23E-04 |
| 30 | GO:0006145: purine nucleobase catabolic process | 4.23E-04 |
| 31 | GO:0006413: translational initiation | 5.64E-04 |
| 32 | GO:0006545: glycine biosynthetic process | 5.65E-04 |
| 33 | GO:0006021: inositol biosynthetic process | 5.65E-04 |
| 34 | GO:0009902: chloroplast relocation | 5.65E-04 |
| 35 | GO:0007623: circadian rhythm | 6.15E-04 |
| 36 | GO:0010027: thylakoid membrane organization | 7.34E-04 |
| 37 | GO:0009643: photosynthetic acclimation | 8.73E-04 |
| 38 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 8.73E-04 |
| 39 | GO:0046855: inositol phosphate dephosphorylation | 8.73E-04 |
| 40 | GO:0006655: phosphatidylglycerol biosynthetic process | 8.73E-04 |
| 41 | GO:0009853: photorespiration | 1.18E-03 |
| 42 | GO:0055085: transmembrane transport | 1.19E-03 |
| 43 | GO:0009645: response to low light intensity stimulus | 1.21E-03 |
| 44 | GO:0006400: tRNA modification | 1.21E-03 |
| 45 | GO:0048564: photosystem I assembly | 1.40E-03 |
| 46 | GO:0009704: de-etiolation | 1.40E-03 |
| 47 | GO:0071482: cellular response to light stimulus | 1.59E-03 |
| 48 | GO:0009644: response to high light intensity | 1.63E-03 |
| 49 | GO:0006754: ATP biosynthetic process | 1.80E-03 |
| 50 | GO:0048507: meristem development | 1.80E-03 |
| 51 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.80E-03 |
| 52 | GO:0090333: regulation of stomatal closure | 1.80E-03 |
| 53 | GO:0009638: phototropism | 2.01E-03 |
| 54 | GO:0006415: translational termination | 2.46E-03 |
| 55 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.70E-03 |
| 56 | GO:0006396: RNA processing | 2.94E-03 |
| 57 | GO:0005986: sucrose biosynthetic process | 2.94E-03 |
| 58 | GO:0006829: zinc II ion transport | 2.94E-03 |
| 59 | GO:0010207: photosystem II assembly | 3.19E-03 |
| 60 | GO:0019853: L-ascorbic acid biosynthetic process | 3.44E-03 |
| 61 | GO:0006833: water transport | 3.71E-03 |
| 62 | GO:0008299: isoprenoid biosynthetic process | 4.26E-03 |
| 63 | GO:0006418: tRNA aminoacylation for protein translation | 4.26E-03 |
| 64 | GO:0009768: photosynthesis, light harvesting in photosystem I | 4.26E-03 |
| 65 | GO:0035428: hexose transmembrane transport | 4.83E-03 |
| 66 | GO:0035556: intracellular signal transduction | 4.96E-03 |
| 67 | GO:0010468: regulation of gene expression | 5.86E-03 |
| 68 | GO:0034220: ion transmembrane transport | 6.05E-03 |
| 69 | GO:0010118: stomatal movement | 6.05E-03 |
| 70 | GO:0046323: glucose import | 6.38E-03 |
| 71 | GO:0019252: starch biosynthetic process | 7.04E-03 |
| 72 | GO:0009791: post-embryonic development | 7.04E-03 |
| 73 | GO:0010193: response to ozone | 7.38E-03 |
| 74 | GO:0009793: embryo development ending in seed dormancy | 8.60E-03 |
| 75 | GO:0001666: response to hypoxia | 9.54E-03 |
| 76 | GO:0046777: protein autophosphorylation | 1.01E-02 |
| 77 | GO:0015995: chlorophyll biosynthetic process | 1.07E-02 |
| 78 | GO:0048481: plant ovule development | 1.15E-02 |
| 79 | GO:0000160: phosphorelay signal transduction system | 1.19E-02 |
| 80 | GO:0007568: aging | 1.27E-02 |
| 81 | GO:0055114: oxidation-reduction process | 1.31E-02 |
| 82 | GO:0009637: response to blue light | 1.36E-02 |
| 83 | GO:0010114: response to red light | 1.63E-02 |
| 84 | GO:0009409: response to cold | 1.67E-02 |
| 85 | GO:0046686: response to cadmium ion | 1.99E-02 |
| 86 | GO:0006364: rRNA processing | 2.01E-02 |
| 87 | GO:0006417: regulation of translation | 2.16E-02 |
| 88 | GO:0009735: response to cytokinin | 2.26E-02 |
| 89 | GO:0009624: response to nematode | 2.58E-02 |
| 90 | GO:0006457: protein folding | 3.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0022883: zinc efflux transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 5 | GO:0016708: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor | 0.00E+00 |
| 6 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 7 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 8 | GO:0019144: ADP-sugar diphosphatase activity | 0.00E+00 |
| 9 | GO:0019133: choline monooxygenase activity | 0.00E+00 |
| 10 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 11 | GO:0008453: alanine-glyoxylate transaminase activity | 5.16E-06 |
| 12 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.91E-05 |
| 13 | GO:0016168: chlorophyll binding | 4.31E-05 |
| 14 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 7.23E-05 |
| 15 | GO:0004830: tryptophan-tRNA ligase activity | 7.23E-05 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 7.23E-05 |
| 17 | GO:0016784: 3-mercaptopyruvate sulfurtransferase activity | 7.23E-05 |
| 18 | GO:0035671: enone reductase activity | 7.23E-05 |
| 19 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 7.23E-05 |
| 20 | GO:0080042: ADP-glucose pyrophosphohydrolase activity | 7.23E-05 |
| 21 | GO:0004813: alanine-tRNA ligase activity | 7.23E-05 |
| 22 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 1.74E-04 |
| 23 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.74E-04 |
| 24 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.74E-04 |
| 25 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.74E-04 |
| 26 | GO:0030267: glyoxylate reductase (NADP) activity | 2.93E-04 |
| 27 | GO:0070402: NADPH binding | 2.93E-04 |
| 28 | GO:0003913: DNA photolyase activity | 2.93E-04 |
| 29 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.93E-04 |
| 30 | GO:0050307: sucrose-phosphate phosphatase activity | 2.93E-04 |
| 31 | GO:0022891: substrate-specific transmembrane transporter activity | 3.04E-04 |
| 32 | GO:0009882: blue light photoreceptor activity | 4.23E-04 |
| 33 | GO:0048027: mRNA 5'-UTR binding | 4.23E-04 |
| 34 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 4.23E-04 |
| 35 | GO:0016851: magnesium chelatase activity | 4.23E-04 |
| 36 | GO:0004792: thiosulfate sulfurtransferase activity | 4.23E-04 |
| 37 | GO:0016149: translation release factor activity, codon specific | 4.23E-04 |
| 38 | GO:0046872: metal ion binding | 4.40E-04 |
| 39 | GO:0016853: isomerase activity | 4.49E-04 |
| 40 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 5.65E-04 |
| 41 | GO:0043495: protein anchor | 5.65E-04 |
| 42 | GO:0009011: starch synthase activity | 5.65E-04 |
| 43 | GO:0004559: alpha-mannosidase activity | 1.04E-03 |
| 44 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.04E-03 |
| 45 | GO:0019899: enzyme binding | 1.21E-03 |
| 46 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.80E-03 |
| 47 | GO:0003747: translation release factor activity | 1.80E-03 |
| 48 | GO:0000049: tRNA binding | 2.70E-03 |
| 49 | GO:0031072: heat shock protein binding | 2.94E-03 |
| 50 | GO:0000155: phosphorelay sensor kinase activity | 2.94E-03 |
| 51 | GO:0031409: pigment binding | 3.71E-03 |
| 52 | GO:0016887: ATPase activity | 3.90E-03 |
| 53 | GO:0003727: single-stranded RNA binding | 5.43E-03 |
| 54 | GO:0003743: translation initiation factor activity | 5.73E-03 |
| 55 | GO:0004812: aminoacyl-tRNA ligase activity | 5.74E-03 |
| 56 | GO:0042802: identical protein binding | 6.23E-03 |
| 57 | GO:0008080: N-acetyltransferase activity | 6.38E-03 |
| 58 | GO:0010181: FMN binding | 6.70E-03 |
| 59 | GO:0005355: glucose transmembrane transporter activity | 6.70E-03 |
| 60 | GO:0004518: nuclease activity | 7.72E-03 |
| 61 | GO:0016597: amino acid binding | 9.16E-03 |
| 62 | GO:0015250: water channel activity | 9.54E-03 |
| 63 | GO:0004721: phosphoprotein phosphatase activity | 1.07E-02 |
| 64 | GO:0030145: manganese ion binding | 1.27E-02 |
| 65 | GO:0050897: cobalt ion binding | 1.27E-02 |
| 66 | GO:0005524: ATP binding | 1.29E-02 |
| 67 | GO:0003924: GTPase activity | 1.39E-02 |
| 68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.72E-02 |
| 69 | GO:0043621: protein self-association | 1.72E-02 |
| 70 | GO:0051287: NAD binding | 1.86E-02 |
| 71 | GO:0051082: unfolded protein binding | 2.58E-02 |
| 72 | GO:0016746: transferase activity, transferring acyl groups | 2.64E-02 |
| 73 | GO:0030170: pyridoxal phosphate binding | 3.26E-02 |
| 74 | GO:0015144: carbohydrate transmembrane transporter activity | 3.44E-02 |
| 75 | GO:0005351: sugar:proton symporter activity | 3.75E-02 |
| 76 | GO:0005525: GTP binding | 4.06E-02 |
| 77 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.52E-02 |
| 78 | GO:0005506: iron ion binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.80E-21 |
| 2 | GO:0009570: chloroplast stroma | 1.35E-11 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 8.70E-09 |
| 4 | GO:0009782: photosystem I antenna complex | 7.23E-05 |
| 5 | GO:0009941: chloroplast envelope | 1.35E-04 |
| 6 | GO:0009579: thylakoid | 1.84E-04 |
| 7 | GO:0042651: thylakoid membrane | 2.30E-04 |
| 8 | GO:0010007: magnesium chelatase complex | 2.93E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 4.09E-04 |
| 10 | GO:0009523: photosystem II | 4.81E-04 |
| 11 | GO:0009534: chloroplast thylakoid | 1.10E-03 |
| 12 | GO:0031977: thylakoid lumen | 1.40E-03 |
| 13 | GO:0042644: chloroplast nucleoid | 1.80E-03 |
| 14 | GO:0030076: light-harvesting complex | 3.44E-03 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 4.26E-03 |
| 16 | GO:0048046: apoplast | 4.73E-03 |
| 17 | GO:0019898: extrinsic component of membrane | 7.04E-03 |
| 18 | GO:0010319: stromule | 8.79E-03 |
| 19 | GO:0031969: chloroplast membrane | 9.41E-03 |
| 20 | GO:0005739: mitochondrion | 1.50E-02 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 2.31E-02 |
| 22 | GO:0005777: peroxisome | 2.84E-02 |
| 23 | GO:0010287: plastoglobule | 2.92E-02 |
| 24 | GO:0005773: vacuole | 2.97E-02 |
| 25 | GO:0005759: mitochondrial matrix | 3.56E-02 |
| 26 | GO:0009705: plant-type vacuole membrane | 3.81E-02 |
| 27 | GO:0016020: membrane | 4.46E-02 |