co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G20110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071000: response to magnetism	0.00E+00
2	GO:0016576: histone dephosphorylation	0.00E+00
3	GO:0033317: pantothenate biosynthetic process from valine	0.00E+00
4	GO:0009583: detection of light stimulus	0.00E+00
5	GO:0046294: formaldehyde catabolic process	0.00E+00
6	GO:0010477: response to sulfur dioxide	0.00E+00
7	GO:0048856: anatomical structure development	0.00E+00
8	GO:0072387: flavin adenine dinucleotide metabolic process	1.37E-04
9	GO:0071461: cellular response to redox state	1.37E-04
10	GO:0048438: floral whorl development	1.37E-04
11	GO:0009767: photosynthetic electron transport chain	3.14E-04
12	GO:0080005: photosystem stoichiometry adjustment	3.16E-04
13	GO:0010617: circadian regulation of calcium ion oscillation	3.16E-04
14	GO:0099402: plant organ development	3.16E-04
15	GO:0035335: peptidyl-tyrosine dephosphorylation	3.16E-04
16	GO:0010343: singlet oxygen-mediated programmed cell death	3.16E-04
17	GO:1901529: positive regulation of anion channel activity	3.16E-04
18	GO:0015940: pantothenate biosynthetic process	5.20E-04
19	GO:0071836: nectar secretion	5.20E-04
20	GO:0045739: positive regulation of DNA repair	5.20E-04
21	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	5.20E-04
22	GO:1902448: positive regulation of shade avoidance	5.20E-04
23	GO:1901672: positive regulation of systemic acquired resistance	5.20E-04
24	GO:0009658: chloroplast organization	5.26E-04
25	GO:1901332: negative regulation of lateral root development	7.44E-04
26	GO:2001141: regulation of RNA biosynthetic process	7.44E-04
27	GO:1902476: chloride transmembrane transport	7.44E-04
28	GO:0046653: tetrahydrofolate metabolic process	7.44E-04
29	GO:1902347: response to strigolactone	9.85E-04
30	GO:0034613: cellular protein localization	9.85E-04
31	GO:0042274: ribosomal small subunit biogenesis	9.85E-04
32	GO:0031935: regulation of chromatin silencing	9.85E-04
33	GO:0015994: chlorophyll metabolic process	9.85E-04
34	GO:0010117: photoprotection	1.25E-03
35	GO:0046283: anthocyanin-containing compound metabolic process	1.25E-03
36	GO:0045038: protein import into chloroplast thylakoid membrane	1.25E-03
37	GO:0007094: mitotic spindle assembly checkpoint	1.25E-03
38	GO:0010190: cytochrome b6f complex assembly	1.53E-03
39	GO:0016070: RNA metabolic process	1.53E-03
40	GO:0006555: methionine metabolic process	1.53E-03
41	GO:0031053: primary miRNA processing	1.53E-03
42	GO:1901371: regulation of leaf morphogenesis	1.53E-03
43	GO:0000741: karyogamy	1.53E-03
44	GO:0060918: auxin transport	1.53E-03
45	GO:0010076: maintenance of floral meristem identity	1.83E-03
46	GO:0010016: shoot system morphogenesis	1.83E-03
47	GO:0010019: chloroplast-nucleus signaling pathway	1.83E-03
48	GO:0010310: regulation of hydrogen peroxide metabolic process	1.83E-03
49	GO:0019509: L-methionine salvage from methylthioadenosine	1.83E-03
50	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.83E-03
51	GO:0055114: oxidation-reduction process	1.89E-03
52	GO:0051510: regulation of unidimensional cell growth	2.15E-03
53	GO:0010038: response to metal ion	2.15E-03
54	GO:1900056: negative regulation of leaf senescence	2.15E-03
55	GO:0080111: DNA demethylation	2.15E-03
56	GO:0009396: folic acid-containing compound biosynthetic process	2.15E-03
57	GO:0006821: chloride transport	2.15E-03
58	GO:0006811: ion transport	2.40E-03
59	GO:0030091: protein repair	2.49E-03
60	GO:0009704: de-etiolation	2.49E-03
61	GO:0006102: isocitrate metabolic process	2.49E-03
62	GO:0048564: photosystem I assembly	2.49E-03
63	GO:0045292: mRNA cis splicing, via spliceosome	2.49E-03
64	GO:0007568: aging	2.51E-03
65	GO:0009910: negative regulation of flower development	2.51E-03
66	GO:0009853: photorespiration	2.75E-03
67	GO:0044030: regulation of DNA methylation	2.85E-03
68	GO:0071482: cellular response to light stimulus	2.85E-03
69	GO:0022900: electron transport chain	2.85E-03
70	GO:0009821: alkaloid biosynthetic process	3.22E-03
71	GO:1900426: positive regulation of defense response to bacterium	3.60E-03
72	GO:0009638: phototropism	3.60E-03
73	GO:0035999: tetrahydrofolate interconversion	3.60E-03
74	GO:0010380: regulation of chlorophyll biosynthetic process	3.60E-03
75	GO:0009644: response to high light intensity	3.82E-03
76	GO:0043085: positive regulation of catalytic activity	4.42E-03
77	GO:0006352: DNA-templated transcription, initiation	4.42E-03
78	GO:0006790: sulfur compound metabolic process	4.85E-03
79	GO:0010582: floral meristem determinacy	4.85E-03
80	GO:0010075: regulation of meristem growth	5.30E-03
81	GO:0005986: sucrose biosynthetic process	5.30E-03
82	GO:0009785: blue light signaling pathway	5.30E-03
83	GO:0010207: photosystem II assembly	5.76E-03
84	GO:0009266: response to temperature stimulus	5.76E-03
85	GO:0032259: methylation	6.39E-03
86	GO:0000162: tryptophan biosynthetic process	6.71E-03
87	GO:2000377: regulation of reactive oxygen species metabolic process	7.22E-03
88	GO:0016226: iron-sulfur cluster assembly	8.79E-03
89	GO:0006730: one-carbon metabolic process	8.79E-03
90	GO:0006284: base-excision repair	9.92E-03
91	GO:0010118: stomatal movement	1.11E-02
92	GO:0010197: polar nucleus fusion	1.17E-02
93	GO:0042752: regulation of circadian rhythm	1.23E-02
94	GO:0009646: response to absence of light	1.23E-02
95	GO:0009851: auxin biosynthetic process	1.29E-02
96	GO:0030163: protein catabolic process	1.49E-02
97	GO:0006464: cellular protein modification process	1.55E-02
98	GO:0071805: potassium ion transmembrane transport	1.62E-02
99	GO:0016579: protein deubiquitination	1.69E-02
100	GO:0006974: cellular response to DNA damage stimulus	1.90E-02
101	GO:0042128: nitrate assimilation	1.90E-02
102	GO:0006950: response to stress	1.98E-02
103	GO:0015995: chlorophyll biosynthetic process	1.98E-02
104	GO:0006511: ubiquitin-dependent protein catabolic process	2.06E-02
105	GO:0018298: protein-chromophore linkage	2.12E-02
106	GO:0010218: response to far red light	2.28E-02
107	GO:0010043: response to zinc ion	2.36E-02
108	GO:0009637: response to blue light	2.51E-02
109	GO:0006099: tricarboxylic acid cycle	2.60E-02
110	GO:0010114: response to red light	3.01E-02
111	GO:0009640: photomorphogenesis	3.01E-02
112	GO:0009636: response to toxic substance	3.27E-02
113	GO:0006281: DNA repair	3.32E-02
114	GO:0006260: DNA replication	3.45E-02
115	GO:0000165: MAPK cascade	3.45E-02
116	GO:0051603: proteolysis involved in cellular protein catabolic process	3.82E-02
117	GO:0010224: response to UV-B	3.82E-02
118	GO:0006417: regulation of translation	4.00E-02
119	GO:0048367: shoot system development	4.29E-02
120	GO:0006508: proteolysis	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0018738: S-formylglutathione hydrolase activity	0.00E+00
2	GO:0008482: sulfite oxidase activity	0.00E+00
3	GO:0004592: pantoate-beta-alanine ligase activity	0.00E+00
4	GO:0030946: protein tyrosine phosphatase activity, metal-dependent	0.00E+00
5	GO:0004848: ureidoglycolate hydrolase activity	3.53E-06
6	GO:0016491: oxidoreductase activity	4.31E-05
7	GO:0016783: sulfurtransferase activity	1.37E-04
8	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	1.37E-04
9	GO:0046906: tetrapyrrole binding	1.37E-04
10	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.37E-04
11	GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	1.37E-04
12	GO:0071949: FAD binding	1.44E-04
13	GO:0004450: isocitrate dehydrogenase (NADP+) activity	3.16E-04
14	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	3.16E-04
15	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	3.16E-04
16	GO:0004046: aminoacylase activity	3.16E-04
17	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.20E-04
18	GO:0000900: translation repressor activity, nucleic acid binding	5.20E-04
19	GO:0004180: carboxypeptidase activity	5.20E-04
20	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.20E-04
21	GO:0046524: sucrose-phosphate synthase activity	5.20E-04
22	GO:0032947: protein complex scaffold	5.20E-04
23	GO:0004792: thiosulfate sulfurtransferase activity	7.44E-04
24	GO:0000339: RNA cap binding	7.44E-04
25	GO:0009882: blue light photoreceptor activity	7.44E-04
26	GO:0005253: anion channel activity	9.85E-04
27	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	9.85E-04
28	GO:0001053: plastid sigma factor activity	9.85E-04
29	GO:0004834: tryptophan synthase activity	9.85E-04
30	GO:0016987: sigma factor activity	9.85E-04
31	GO:0052793: pectin acetylesterase activity	9.85E-04
32	GO:0048038: quinone binding	1.17E-03
33	GO:0030151: molybdenum ion binding	1.25E-03
34	GO:0005247: voltage-gated chloride channel activity	1.53E-03
35	GO:0015271: outward rectifier potassium channel activity	1.53E-03
36	GO:0000293: ferric-chelate reductase activity	1.53E-03
37	GO:0016157: sucrose synthase activity	1.83E-03
38	GO:0019899: enzyme binding	2.15E-03
39	GO:0016787: hydrolase activity	2.54E-03
40	GO:0005267: potassium channel activity	2.85E-03
41	GO:0008168: methyltransferase activity	2.99E-03
42	GO:0016844: strictosidine synthase activity	3.60E-03
43	GO:0051287: NAD binding	4.27E-03
44	GO:0047372: acylglycerol lipase activity	4.42E-03
45	GO:0004129: cytochrome-c oxidase activity	4.42E-03
46	GO:0031072: heat shock protein binding	5.30E-03
47	GO:0022857: transmembrane transporter activity	6.36E-03
48	GO:0003887: DNA-directed DNA polymerase activity	6.71E-03
49	GO:0051536: iron-sulfur cluster binding	7.22E-03
50	GO:0004176: ATP-dependent peptidase activity	8.26E-03
51	GO:0008080: N-acetyltransferase activity	1.17E-02
52	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.36E-02
53	GO:0042802: identical protein binding	1.49E-02
54	GO:0008483: transaminase activity	1.62E-02
55	GO:0008237: metallopeptidase activity	1.62E-02
56	GO:0016788: hydrolase activity, acting on ester bonds	1.85E-02
57	GO:0008236: serine-type peptidase activity	2.05E-02
58	GO:0004222: metalloendopeptidase activity	2.28E-02
59	GO:0052689: carboxylic ester hydrolase activity	2.49E-02
60	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.68E-02
61	GO:0042803: protein homodimerization activity	2.83E-02
62	GO:0004364: glutathione transferase activity	2.93E-02
63	GO:0004185: serine-type carboxypeptidase activity	3.01E-02
64	GO:0051537: 2 iron, 2 sulfur cluster binding	3.19E-02
65	GO:0005198: structural molecule activity	3.27E-02
66	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.72E-02
67	GO:0031625: ubiquitin protein ligase binding	4.00E-02
68	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.29E-02
69	GO:0051082: unfolded protein binding	4.78E-02
70	GO:0016746: transferase activity, transferring acyl groups	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.77E-08
2	GO:0005845: mRNA cap binding complex	1.37E-04
3	GO:0031972: chloroplast intermembrane space	1.37E-04
4	GO:0080085: signal recognition particle, chloroplast targeting	3.16E-04
5	GO:0005846: nuclear cap binding complex	3.16E-04
6	GO:0016605: PML body	5.20E-04
7	GO:0034707: chloride channel complex	1.53E-03
8	GO:0000123: histone acetyltransferase complex	2.15E-03
9	GO:0009535: chloroplast thylakoid membrane	2.77E-03
10	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.85E-03
11	GO:0046930: pore complex	2.85E-03
12	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.22E-03
13	GO:0016604: nuclear body	3.60E-03
14	GO:0031969: chloroplast membrane	4.12E-03
15	GO:0031966: mitochondrial membrane	4.43E-03
16	GO:0045271: respiratory chain complex I	7.73E-03
17	GO:0005622: intracellular	2.89E-02
18	GO:0005747: mitochondrial respiratory chain complex I	4.29E-02
19	GO:0005737: cytoplasm	4.32E-02
20	GO:0009706: chloroplast inner membrane	4.78E-02