GO Enrichment Analysis of Co-expressed Genes with
AT5G19510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 4 | GO:0046487: glyoxylate metabolic process | 0.00E+00 |
| 5 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 6 | GO:0006412: translation | 1.28E-139 |
| 7 | GO:0042254: ribosome biogenesis | 4.26E-59 |
| 8 | GO:0000027: ribosomal large subunit assembly | 5.67E-16 |
| 9 | GO:0000028: ribosomal small subunit assembly | 5.89E-08 |
| 10 | GO:0009955: adaxial/abaxial pattern specification | 2.47E-06 |
| 11 | GO:0009735: response to cytokinin | 3.98E-06 |
| 12 | GO:1902626: assembly of large subunit precursor of preribosome | 1.21E-05 |
| 13 | GO:0002181: cytoplasmic translation | 1.21E-05 |
| 14 | GO:0006626: protein targeting to mitochondrion | 4.30E-05 |
| 15 | GO:0032365: intracellular lipid transport | 2.70E-04 |
| 16 | GO:0006407: rRNA export from nucleus | 2.70E-04 |
| 17 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 2.70E-04 |
| 18 | GO:0031120: snRNA pseudouridine synthesis | 2.70E-04 |
| 19 | GO:0031118: rRNA pseudouridine synthesis | 2.70E-04 |
| 20 | GO:0015801: aromatic amino acid transport | 2.70E-04 |
| 21 | GO:0030490: maturation of SSU-rRNA | 2.70E-04 |
| 22 | GO:0006434: seryl-tRNA aminoacylation | 2.70E-04 |
| 23 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.70E-04 |
| 24 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.70E-04 |
| 25 | GO:0000387: spliceosomal snRNP assembly | 4.56E-04 |
| 26 | GO:0045859: regulation of protein kinase activity | 5.94E-04 |
| 27 | GO:0045905: positive regulation of translational termination | 5.94E-04 |
| 28 | GO:0045901: positive regulation of translational elongation | 5.94E-04 |
| 29 | GO:0048569: post-embryonic animal organ development | 5.94E-04 |
| 30 | GO:0043981: histone H4-K5 acetylation | 5.94E-04 |
| 31 | GO:0006452: translational frameshifting | 5.94E-04 |
| 32 | GO:0009967: positive regulation of signal transduction | 5.94E-04 |
| 33 | GO:0000398: mRNA splicing, via spliceosome | 6.27E-04 |
| 34 | GO:0006820: anion transport | 7.02E-04 |
| 35 | GO:0009150: purine ribonucleotide metabolic process | 9.62E-04 |
| 36 | GO:0010476: gibberellin mediated signaling pathway | 9.62E-04 |
| 37 | GO:0042256: mature ribosome assembly | 9.62E-04 |
| 38 | GO:0008283: cell proliferation | 1.33E-03 |
| 39 | GO:0006165: nucleoside diphosphate phosphorylation | 1.38E-03 |
| 40 | GO:0006228: UTP biosynthetic process | 1.38E-03 |
| 41 | GO:0006164: purine nucleotide biosynthetic process | 1.38E-03 |
| 42 | GO:0007004: telomere maintenance via telomerase | 1.38E-03 |
| 43 | GO:0070301: cellular response to hydrogen peroxide | 1.38E-03 |
| 44 | GO:0006241: CTP biosynthetic process | 1.38E-03 |
| 45 | GO:0042274: ribosomal small subunit biogenesis | 1.84E-03 |
| 46 | GO:0006183: GTP biosynthetic process | 1.84E-03 |
| 47 | GO:0006364: rRNA processing | 1.94E-03 |
| 48 | GO:0019408: dolichol biosynthetic process | 2.35E-03 |
| 49 | GO:0000470: maturation of LSU-rRNA | 2.90E-03 |
| 50 | GO:0006635: fatty acid beta-oxidation | 2.98E-03 |
| 51 | GO:0006458: 'de novo' protein folding | 3.49E-03 |
| 52 | GO:0016444: somatic cell DNA recombination | 3.49E-03 |
| 53 | GO:0009645: response to low light intensity stimulus | 4.12E-03 |
| 54 | GO:0001522: pseudouridine synthesis | 4.77E-03 |
| 55 | GO:0001558: regulation of cell growth | 5.47E-03 |
| 56 | GO:0030968: endoplasmic reticulum unfolded protein response | 5.47E-03 |
| 57 | GO:0043562: cellular response to nitrogen levels | 5.47E-03 |
| 58 | GO:0006413: translational initiation | 5.56E-03 |
| 59 | GO:0006189: 'de novo' IMP biosynthetic process | 6.20E-03 |
| 60 | GO:0098656: anion transmembrane transport | 6.20E-03 |
| 61 | GO:0010162: seed dormancy process | 7.75E-03 |
| 62 | GO:0010015: root morphogenesis | 8.58E-03 |
| 63 | GO:0006913: nucleocytoplasmic transport | 8.58E-03 |
| 64 | GO:0006790: sulfur compound metabolic process | 9.44E-03 |
| 65 | GO:0012501: programmed cell death | 9.44E-03 |
| 66 | GO:0009644: response to high light intensity | 9.94E-03 |
| 67 | GO:0009965: leaf morphogenesis | 1.03E-02 |
| 68 | GO:0010102: lateral root morphogenesis | 1.03E-02 |
| 69 | GO:2000028: regulation of photoperiodism, flowering | 1.03E-02 |
| 70 | GO:0006446: regulation of translational initiation | 1.12E-02 |
| 71 | GO:0048467: gynoecium development | 1.12E-02 |
| 72 | GO:0030150: protein import into mitochondrial matrix | 1.42E-02 |
| 73 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.42E-02 |
| 74 | GO:0006487: protein N-linked glycosylation | 1.42E-02 |
| 75 | GO:0051302: regulation of cell division | 1.52E-02 |
| 76 | GO:0003333: amino acid transmembrane transport | 1.62E-02 |
| 77 | GO:0006334: nucleosome assembly | 1.62E-02 |
| 78 | GO:0061077: chaperone-mediated protein folding | 1.62E-02 |
| 79 | GO:0007005: mitochondrion organization | 1.73E-02 |
| 80 | GO:0071215: cellular response to abscisic acid stimulus | 1.84E-02 |
| 81 | GO:0009294: DNA mediated transformation | 1.84E-02 |
| 82 | GO:0040007: growth | 1.84E-02 |
| 83 | GO:0015031: protein transport | 1.87E-02 |
| 84 | GO:0009793: embryo development ending in seed dormancy | 1.94E-02 |
| 85 | GO:0010197: polar nucleus fusion | 2.31E-02 |
| 86 | GO:0009845: seed germination | 2.40E-02 |
| 87 | GO:0009749: response to glucose | 2.55E-02 |
| 88 | GO:0046686: response to cadmium ion | 2.64E-02 |
| 89 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.68E-02 |
| 90 | GO:0009617: response to bacterium | 3.65E-02 |
| 91 | GO:0042128: nitrate assimilation | 3.77E-02 |
| 92 | GO:0006811: ion transport | 4.51E-02 |
| 93 | GO:0010043: response to zinc ion | 4.66E-02 |
| 94 | GO:0000724: double-strand break repair via homologous recombination | 4.82E-02 |
| 95 | GO:0006865: amino acid transport | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 6.07E-163 |
| 4 | GO:0003729: mRNA binding | 2.40E-29 |
| 5 | GO:0019843: rRNA binding | 5.07E-14 |
| 6 | GO:0015288: porin activity | 6.06E-06 |
| 7 | GO:0008097: 5S rRNA binding | 2.72E-05 |
| 8 | GO:0003723: RNA binding | 6.49E-05 |
| 9 | GO:0043022: ribosome binding | 2.58E-04 |
| 10 | GO:0004679: AMP-activated protein kinase activity | 2.70E-04 |
| 11 | GO:0005080: protein kinase C binding | 2.70E-04 |
| 12 | GO:0035614: snRNA stem-loop binding | 2.70E-04 |
| 13 | GO:0004828: serine-tRNA ligase activity | 2.70E-04 |
| 14 | GO:0008308: voltage-gated anion channel activity | 3.19E-04 |
| 15 | GO:0001055: RNA polymerase II activity | 4.56E-04 |
| 16 | GO:0005078: MAP-kinase scaffold activity | 5.94E-04 |
| 17 | GO:0030619: U1 snRNA binding | 5.94E-04 |
| 18 | GO:0015173: aromatic amino acid transmembrane transporter activity | 5.94E-04 |
| 19 | GO:0070034: telomerase RNA binding | 5.94E-04 |
| 20 | GO:0032934: sterol binding | 5.94E-04 |
| 21 | GO:0001054: RNA polymerase I activity | 6.14E-04 |
| 22 | GO:0044183: protein binding involved in protein folding | 6.14E-04 |
| 23 | GO:0001056: RNA polymerase III activity | 7.02E-04 |
| 24 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.22E-04 |
| 25 | GO:0032947: protein complex scaffold | 9.62E-04 |
| 26 | GO:0003746: translation elongation factor activity | 9.69E-04 |
| 27 | GO:0004550: nucleoside diphosphate kinase activity | 1.38E-03 |
| 28 | GO:0047627: adenylylsulfatase activity | 1.38E-03 |
| 29 | GO:0005275: amine transmembrane transporter activity | 2.35E-03 |
| 30 | GO:0045547: dehydrodolichyl diphosphate synthase activity | 2.35E-03 |
| 31 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 2.90E-03 |
| 32 | GO:0019887: protein kinase regulator activity | 3.49E-03 |
| 33 | GO:0030515: snoRNA binding | 4.12E-03 |
| 34 | GO:0008235: metalloexopeptidase activity | 4.12E-03 |
| 35 | GO:0015266: protein channel activity | 1.03E-02 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.24E-02 |
| 37 | GO:0004407: histone deacetylase activity | 1.42E-02 |
| 38 | GO:0005216: ion channel activity | 1.52E-02 |
| 39 | GO:0051082: unfolded protein binding | 1.77E-02 |
| 40 | GO:0003743: translation initiation factor activity | 3.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 2 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 3 | GO:0043186: P granule | 0.00E+00 |
| 4 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 5 | GO:0005840: ribosome | 1.38E-111 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 1.68E-109 |
| 7 | GO:0022626: cytosolic ribosome | 1.74E-95 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 3.34E-67 |
| 9 | GO:0005737: cytoplasm | 3.26E-39 |
| 10 | GO:0005730: nucleolus | 3.36E-31 |
| 11 | GO:0005829: cytosol | 2.61E-30 |
| 12 | GO:0009506: plasmodesma | 2.32E-23 |
| 13 | GO:0015934: large ribosomal subunit | 2.66E-19 |
| 14 | GO:0005774: vacuolar membrane | 4.61E-14 |
| 15 | GO:0015935: small ribosomal subunit | 1.87E-11 |
| 16 | GO:0016020: membrane | 9.10E-11 |
| 17 | GO:0005773: vacuole | 1.93E-10 |
| 18 | GO:0005618: cell wall | 9.01E-10 |
| 19 | GO:0046930: pore complex | 8.77E-06 |
| 20 | GO:0005886: plasma membrane | 2.16E-05 |
| 21 | GO:0019013: viral nucleocapsid | 4.30E-05 |
| 22 | GO:0009507: chloroplast | 7.49E-05 |
| 23 | GO:0030686: 90S preribosome | 2.70E-04 |
| 24 | GO:0005742: mitochondrial outer membrane translocase complex | 3.19E-04 |
| 25 | GO:0005685: U1 snRNP | 3.84E-04 |
| 26 | GO:0005736: DNA-directed RNA polymerase I complex | 3.84E-04 |
| 27 | GO:0005666: DNA-directed RNA polymerase III complex | 4.56E-04 |
| 28 | GO:0015030: Cajal body | 4.56E-04 |
| 29 | GO:0000418: DNA-directed RNA polymerase IV complex | 5.32E-04 |
| 30 | GO:0005665: DNA-directed RNA polymerase II, core complex | 7.02E-04 |
| 31 | GO:0034719: SMN-Sm protein complex | 9.62E-04 |
| 32 | GO:0005853: eukaryotic translation elongation factor 1 complex | 9.62E-04 |
| 33 | GO:0005758: mitochondrial intermembrane space | 1.23E-03 |
| 34 | GO:0031429: box H/ACA snoRNP complex | 1.38E-03 |
| 35 | GO:0005741: mitochondrial outer membrane | 1.48E-03 |
| 36 | GO:0005682: U5 snRNP | 1.84E-03 |
| 37 | GO:0005687: U4 snRNP | 2.35E-03 |
| 38 | GO:0097526: spliceosomal tri-snRNP complex | 2.35E-03 |
| 39 | GO:0005681: spliceosomal complex | 2.40E-03 |
| 40 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.39E-03 |
| 41 | GO:0005689: U12-type spliceosomal complex | 3.49E-03 |
| 42 | GO:0016272: prefoldin complex | 3.49E-03 |
| 43 | GO:0031359: integral component of chloroplast outer membrane | 4.12E-03 |
| 44 | GO:0030529: intracellular ribonucleoprotein complex | 4.30E-03 |
| 45 | GO:0071004: U2-type prespliceosome | 4.77E-03 |
| 46 | GO:0071011: precatalytic spliceosome | 6.96E-03 |
| 47 | GO:0005686: U2 snRNP | 7.75E-03 |
| 48 | GO:0071013: catalytic step 2 spliceosome | 8.58E-03 |
| 49 | GO:0048471: perinuclear region of cytoplasm | 8.58E-03 |
| 50 | GO:0005852: eukaryotic translation initiation factor 3 complex | 8.58E-03 |
| 51 | GO:0000419: DNA-directed RNA polymerase V complex | 1.32E-02 |
| 52 | GO:0005747: mitochondrial respiratory chain complex I | 1.52E-02 |
| 53 | GO:0009706: chloroplast inner membrane | 1.77E-02 |
| 54 | GO:0005743: mitochondrial inner membrane | 2.08E-02 |
| 55 | GO:0005622: intracellular | 3.15E-02 |