GO Enrichment Analysis of Co-expressed Genes with
AT5G19500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031564: transcription antitermination | 0.00E+00 |
| 2 | GO:0090239: regulation of histone H4 acetylation | 0.00E+00 |
| 3 | GO:0000740: nuclear membrane fusion | 0.00E+00 |
| 4 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 5 | GO:0006412: translation | 7.35E-161 |
| 6 | GO:0042254: ribosome biogenesis | 1.61E-57 |
| 7 | GO:0000027: ribosomal large subunit assembly | 9.70E-13 |
| 8 | GO:0000028: ribosomal small subunit assembly | 1.98E-09 |
| 9 | GO:0006626: protein targeting to mitochondrion | 7.23E-08 |
| 10 | GO:0000398: mRNA splicing, via spliceosome | 2.40E-07 |
| 11 | GO:0000387: spliceosomal snRNP assembly | 9.61E-07 |
| 12 | GO:0009955: adaxial/abaxial pattern specification | 7.12E-06 |
| 13 | GO:1902626: assembly of large subunit precursor of preribosome | 2.57E-05 |
| 14 | GO:0002181: cytoplasmic translation | 2.57E-05 |
| 15 | GO:0006414: translational elongation | 1.97E-04 |
| 16 | GO:0045040: protein import into mitochondrial outer membrane | 2.19E-04 |
| 17 | GO:1990258: histone glutamine methylation | 4.07E-04 |
| 18 | GO:0006407: rRNA export from nucleus | 4.07E-04 |
| 19 | GO:0031120: snRNA pseudouridine synthesis | 4.07E-04 |
| 20 | GO:0031118: rRNA pseudouridine synthesis | 4.07E-04 |
| 21 | GO:0030490: maturation of SSU-rRNA | 4.07E-04 |
| 22 | GO:0000494: box C/D snoRNA 3'-end processing | 4.07E-04 |
| 23 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.07E-04 |
| 24 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.07E-04 |
| 25 | GO:0009651: response to salt stress | 6.91E-04 |
| 26 | GO:0015786: UDP-glucose transport | 8.83E-04 |
| 27 | GO:0045041: protein import into mitochondrial intermembrane space | 8.83E-04 |
| 28 | GO:0048569: post-embryonic animal organ development | 8.83E-04 |
| 29 | GO:0043981: histone H4-K5 acetylation | 8.83E-04 |
| 30 | GO:0010198: synergid death | 8.83E-04 |
| 31 | GO:0006820: anion transport | 1.25E-03 |
| 32 | GO:1904278: positive regulation of wax biosynthetic process | 1.43E-03 |
| 33 | GO:0015783: GDP-fucose transport | 1.43E-03 |
| 34 | GO:0034227: tRNA thio-modification | 1.43E-03 |
| 35 | GO:0042256: mature ribosome assembly | 1.43E-03 |
| 36 | GO:0090506: axillary shoot meristem initiation | 1.43E-03 |
| 37 | GO:0010452: histone H3-K36 methylation | 1.43E-03 |
| 38 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.07E-03 |
| 39 | GO:0006165: nucleoside diphosphate phosphorylation | 2.07E-03 |
| 40 | GO:0006228: UTP biosynthetic process | 2.07E-03 |
| 41 | GO:0006164: purine nucleotide biosynthetic process | 2.07E-03 |
| 42 | GO:0009558: embryo sac cellularization | 2.07E-03 |
| 43 | GO:0007004: telomere maintenance via telomerase | 2.07E-03 |
| 44 | GO:0070301: cellular response to hydrogen peroxide | 2.07E-03 |
| 45 | GO:0051085: chaperone mediated protein folding requiring cofactor | 2.07E-03 |
| 46 | GO:0006241: CTP biosynthetic process | 2.07E-03 |
| 47 | GO:0072334: UDP-galactose transmembrane transport | 2.07E-03 |
| 48 | GO:0030150: protein import into mitochondrial matrix | 2.22E-03 |
| 49 | GO:0006289: nucleotide-excision repair | 2.22E-03 |
| 50 | GO:0009735: response to cytokinin | 2.67E-03 |
| 51 | GO:2000032: regulation of secondary shoot formation | 2.78E-03 |
| 52 | GO:0042274: ribosomal small subunit biogenesis | 2.78E-03 |
| 53 | GO:0006183: GTP biosynthetic process | 2.78E-03 |
| 54 | GO:0009965: leaf morphogenesis | 3.34E-03 |
| 55 | GO:0031167: rRNA methylation | 3.56E-03 |
| 56 | GO:0016070: RNA metabolic process | 4.41E-03 |
| 57 | GO:0051568: histone H3-K4 methylation | 4.41E-03 |
| 58 | GO:0000470: maturation of LSU-rRNA | 4.41E-03 |
| 59 | GO:0043248: proteasome assembly | 4.41E-03 |
| 60 | GO:0010197: polar nucleus fusion | 4.43E-03 |
| 61 | GO:0042026: protein refolding | 5.31E-03 |
| 62 | GO:0006458: 'de novo' protein folding | 5.31E-03 |
| 63 | GO:0000245: spliceosomal complex assembly | 5.31E-03 |
| 64 | GO:0000911: cytokinesis by cell plate formation | 5.31E-03 |
| 65 | GO:0001522: pseudouridine synthesis | 7.30E-03 |
| 66 | GO:0015031: protein transport | 7.34E-03 |
| 67 | GO:0001510: RNA methylation | 8.38E-03 |
| 68 | GO:0009409: response to cold | 8.40E-03 |
| 69 | GO:0006189: 'de novo' IMP biosynthetic process | 9.51E-03 |
| 70 | GO:0048589: developmental growth | 9.51E-03 |
| 71 | GO:0098656: anion transmembrane transport | 9.51E-03 |
| 72 | GO:0009245: lipid A biosynthetic process | 9.51E-03 |
| 73 | GO:0016441: posttranscriptional gene silencing | 1.19E-02 |
| 74 | GO:0006413: translational initiation | 1.21E-02 |
| 75 | GO:0010015: root morphogenesis | 1.32E-02 |
| 76 | GO:0006913: nucleocytoplasmic transport | 1.32E-02 |
| 77 | GO:0016925: protein sumoylation | 1.46E-02 |
| 78 | GO:0010102: lateral root morphogenesis | 1.59E-02 |
| 79 | GO:2000028: regulation of photoperiodism, flowering | 1.59E-02 |
| 80 | GO:0008283: cell proliferation | 1.70E-02 |
| 81 | GO:0006446: regulation of translational initiation | 1.74E-02 |
| 82 | GO:0048467: gynoecium development | 1.74E-02 |
| 83 | GO:0009644: response to high light intensity | 1.84E-02 |
| 84 | GO:0006406: mRNA export from nucleus | 2.19E-02 |
| 85 | GO:0006364: rRNA processing | 2.30E-02 |
| 86 | GO:0061077: chaperone-mediated protein folding | 2.51E-02 |
| 87 | GO:0009793: embryo development ending in seed dormancy | 2.59E-02 |
| 88 | GO:0007005: mitochondrion organization | 2.68E-02 |
| 89 | GO:0040007: growth | 2.85E-02 |
| 90 | GO:0008033: tRNA processing | 3.39E-02 |
| 91 | GO:0000413: protein peptidyl-prolyl isomerization | 3.39E-02 |
| 92 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.15E-02 |
| 93 | GO:0006635: fatty acid beta-oxidation | 4.15E-02 |
| 94 | GO:0080156: mitochondrial mRNA modification | 4.15E-02 |
| 95 | GO:0010090: trichome morphogenesis | 4.55E-02 |
| 96 | GO:0010252: auxin homeostasis | 4.76E-02 |
| 97 | GO:0010286: heat acclimation | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 2 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 3 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 7.31E-201 |
| 5 | GO:0003729: mRNA binding | 2.22E-35 |
| 6 | GO:0019843: rRNA binding | 7.91E-17 |
| 7 | GO:0003723: RNA binding | 9.59E-07 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.77E-05 |
| 9 | GO:0001055: RNA polymerase II activity | 4.37E-05 |
| 10 | GO:0008097: 5S rRNA binding | 5.61E-05 |
| 11 | GO:0001054: RNA polymerase I activity | 7.14E-05 |
| 12 | GO:0001056: RNA polymerase III activity | 8.84E-05 |
| 13 | GO:0030515: snoRNA binding | 3.80E-04 |
| 14 | GO:1990259: histone-glutamine methyltransferase activity | 4.07E-04 |
| 15 | GO:0035614: snRNA stem-loop binding | 4.07E-04 |
| 16 | GO:0015288: porin activity | 4.76E-04 |
| 17 | GO:0008308: voltage-gated anion channel activity | 5.80E-04 |
| 18 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.44E-04 |
| 19 | GO:0030619: U1 snRNA binding | 8.83E-04 |
| 20 | GO:0070034: telomerase RNA binding | 8.83E-04 |
| 21 | GO:0044183: protein binding involved in protein folding | 1.10E-03 |
| 22 | GO:0015266: protein channel activity | 1.42E-03 |
| 23 | GO:0070181: small ribosomal subunit rRNA binding | 1.43E-03 |
| 24 | GO:0008649: rRNA methyltransferase activity | 1.43E-03 |
| 25 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.43E-03 |
| 26 | GO:0005460: UDP-glucose transmembrane transporter activity | 2.07E-03 |
| 27 | GO:0004550: nucleoside diphosphate kinase activity | 2.07E-03 |
| 28 | GO:0003746: translation elongation factor activity | 2.08E-03 |
| 29 | GO:0070628: proteasome binding | 2.78E-03 |
| 30 | GO:0031386: protein tag | 3.56E-03 |
| 31 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.56E-03 |
| 32 | GO:0031593: polyubiquitin binding | 4.41E-03 |
| 33 | GO:0031177: phosphopantetheine binding | 4.41E-03 |
| 34 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.41E-03 |
| 35 | GO:0000035: acyl binding | 5.31E-03 |
| 36 | GO:0051082: unfolded protein binding | 6.60E-03 |
| 37 | GO:0043022: ribosome binding | 7.30E-03 |
| 38 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 7.30E-03 |
| 39 | GO:0031072: heat shock protein binding | 1.59E-02 |
| 40 | GO:0043130: ubiquitin binding | 2.19E-02 |
| 41 | GO:0004298: threonine-type endopeptidase activity | 2.51E-02 |
| 42 | GO:0008514: organic anion transmembrane transporter activity | 3.03E-02 |
| 43 | GO:0003684: damaged DNA binding | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 2 | GO:0043186: P granule | 0.00E+00 |
| 3 | GO:0005675: holo TFIIH complex | 0.00E+00 |
| 4 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 5 | GO:0005840: ribosome | 8.62E-133 |
| 6 | GO:0022626: cytosolic ribosome | 9.54E-121 |
| 7 | GO:0022625: cytosolic large ribosomal subunit | 1.14E-113 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 2.35E-82 |
| 9 | GO:0005737: cytoplasm | 1.71E-40 |
| 10 | GO:0005730: nucleolus | 1.16E-39 |
| 11 | GO:0005829: cytosol | 3.35E-37 |
| 12 | GO:0015934: large ribosomal subunit | 3.70E-21 |
| 13 | GO:0009506: plasmodesma | 4.36E-21 |
| 14 | GO:0005774: vacuolar membrane | 7.91E-18 |
| 15 | GO:0016020: membrane | 1.20E-11 |
| 16 | GO:0005732: small nucleolar ribonucleoprotein complex | 5.02E-10 |
| 17 | GO:0005742: mitochondrial outer membrane translocase complex | 3.90E-09 |
| 18 | GO:0015935: small ribosomal subunit | 1.04E-08 |
| 19 | GO:0005618: cell wall | 6.57E-07 |
| 20 | GO:0005773: vacuole | 1.08E-06 |
| 21 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.78E-06 |
| 22 | GO:0019013: viral nucleocapsid | 3.75E-06 |
| 23 | GO:0005681: spliceosomal complex | 1.62E-05 |
| 24 | GO:0034719: SMN-Sm protein complex | 2.57E-05 |
| 25 | GO:0005685: U1 snRNP | 3.30E-05 |
| 26 | GO:0005736: DNA-directed RNA polymerase I complex | 3.30E-05 |
| 27 | GO:0005666: DNA-directed RNA polymerase III complex | 4.37E-05 |
| 28 | GO:0071011: precatalytic spliceosome | 4.37E-05 |
| 29 | GO:0015030: Cajal body | 4.37E-05 |
| 30 | GO:0000418: DNA-directed RNA polymerase IV complex | 5.65E-05 |
| 31 | GO:0071013: catalytic step 2 spliceosome | 7.14E-05 |
| 32 | GO:0005682: U5 snRNP | 9.87E-05 |
| 33 | GO:0005687: U4 snRNP | 1.53E-04 |
| 34 | GO:0097526: spliceosomal tri-snRNP complex | 1.53E-04 |
| 35 | GO:0000419: DNA-directed RNA polymerase V complex | 1.80E-04 |
| 36 | GO:0005741: mitochondrial outer membrane | 2.74E-04 |
| 37 | GO:0005689: U12-type spliceosomal complex | 2.94E-04 |
| 38 | GO:0030686: 90S preribosome | 4.07E-04 |
| 39 | GO:0005688: U6 snRNP | 4.76E-04 |
| 40 | GO:0046930: pore complex | 5.80E-04 |
| 41 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 5.80E-04 |
| 42 | GO:0071010: prespliceosome | 8.83E-04 |
| 43 | GO:0005686: U2 snRNP | 9.55E-04 |
| 44 | GO:0034715: pICln-Sm protein complex | 1.43E-03 |
| 45 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.43E-03 |
| 46 | GO:0000439: core TFIIH complex | 1.43E-03 |
| 47 | GO:0009507: chloroplast | 2.01E-03 |
| 48 | GO:1990726: Lsm1-7-Pat1 complex | 2.07E-03 |
| 49 | GO:0031429: box H/ACA snoRNP complex | 2.07E-03 |
| 50 | GO:0005758: mitochondrial intermembrane space | 2.22E-03 |
| 51 | GO:0016593: Cdc73/Paf1 complex | 2.78E-03 |
| 52 | GO:0005886: plasma membrane | 2.90E-03 |
| 53 | GO:0000502: proteasome complex | 4.21E-03 |
| 54 | GO:0031428: box C/D snoRNP complex | 4.41E-03 |
| 55 | GO:0000243: commitment complex | 4.41E-03 |
| 56 | GO:0005762: mitochondrial large ribosomal subunit | 5.31E-03 |
| 57 | GO:0016272: prefoldin complex | 5.31E-03 |
| 58 | GO:0071004: U2-type prespliceosome | 7.30E-03 |
| 59 | GO:0016604: nuclear body | 1.07E-02 |
| 60 | GO:0005743: mitochondrial inner membrane | 1.28E-02 |
| 61 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.32E-02 |
| 62 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.32E-02 |
| 63 | GO:0048471: perinuclear region of cytoplasm | 1.32E-02 |
| 64 | GO:0031307: integral component of mitochondrial outer membrane | 1.46E-02 |
| 65 | GO:0032040: small-subunit processome | 1.46E-02 |
| 66 | GO:0070469: respiratory chain | 2.35E-02 |
| 67 | GO:0005839: proteasome core complex | 2.51E-02 |
| 68 | GO:0005747: mitochondrial respiratory chain complex I | 2.81E-02 |
| 69 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.03E-02 |