Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G19290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905421: regulation of plant organ morphogenesis0.00E+00
2GO:0030155: regulation of cell adhesion0.00E+00
3GO:0000025: maltose catabolic process0.00E+00
4GO:0033494: ferulate metabolic process0.00E+00
5GO:0090627: plant epidermal cell differentiation0.00E+00
6GO:0006461: protein complex assembly2.79E-05
7GO:0071902: positive regulation of protein serine/threonine kinase activity1.46E-04
8GO:0032958: inositol phosphate biosynthetic process1.46E-04
9GO:0000023: maltose metabolic process1.46E-04
10GO:0005980: glycogen catabolic process1.46E-04
11GO:0009773: photosynthetic electron transport in photosystem I2.59E-04
12GO:0005983: starch catabolic process2.99E-04
13GO:0031648: protein destabilization3.33E-04
14GO:0071712: ER-associated misfolded protein catabolic process3.33E-04
15GO:0032527: protein exit from endoplasmic reticulum3.33E-04
16GO:0005976: polysaccharide metabolic process3.33E-04
17GO:0009266: response to temperature stimulus3.85E-04
18GO:0009636: response to toxic substance5.19E-04
19GO:0080055: low-affinity nitrate transport5.47E-04
20GO:0031929: TOR signaling5.47E-04
21GO:0048281: inflorescence morphogenesis5.47E-04
22GO:0032940: secretion by cell5.47E-04
23GO:0010506: regulation of autophagy5.47E-04
24GO:0071230: cellular response to amino acid stimulus5.47E-04
25GO:0009735: response to cytokinin6.61E-04
26GO:0010017: red or far-red light signaling pathway7.02E-04
27GO:1902358: sulfate transmembrane transport7.83E-04
28GO:0006020: inositol metabolic process7.83E-04
29GO:1901000: regulation of response to salt stress7.83E-04
30GO:0030100: regulation of endocytosis7.83E-04
31GO:0010148: transpiration7.83E-04
32GO:0010731: protein glutathionylation7.83E-04
33GO:0015979: photosynthesis1.00E-03
34GO:0010037: response to carbon dioxide1.04E-03
35GO:0006808: regulation of nitrogen utilization1.04E-03
36GO:0015976: carbon utilization1.04E-03
37GO:0010023: proanthocyanidin biosynthetic process1.04E-03
38GO:0009765: photosynthesis, light harvesting1.04E-03
39GO:0010600: regulation of auxin biosynthetic process1.04E-03
40GO:0006749: glutathione metabolic process1.04E-03
41GO:2000122: negative regulation of stomatal complex development1.04E-03
42GO:0000470: maturation of LSU-rRNA1.61E-03
43GO:0009267: cellular response to starvation1.61E-03
44GO:0009913: epidermal cell differentiation1.61E-03
45GO:0009861: jasmonic acid and ethylene-dependent systemic resistance1.93E-03
46GO:0009955: adaxial/abaxial pattern specification1.93E-03
47GO:0071470: cellular response to osmotic stress1.93E-03
48GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.93E-03
49GO:0030307: positive regulation of cell growth2.27E-03
50GO:0010103: stomatal complex morphogenesis2.27E-03
51GO:0010161: red light signaling pathway2.27E-03
52GO:0008272: sulfate transport2.27E-03
53GO:0070370: cellular heat acclimation2.27E-03
54GO:0009645: response to low light intensity stimulus2.27E-03
55GO:0009817: defense response to fungus, incompatible interaction2.36E-03
56GO:0009407: toxin catabolic process2.60E-03
57GO:0009704: de-etiolation2.63E-03
58GO:0010928: regulation of auxin mediated signaling pathway2.63E-03
59GO:0006353: DNA-templated transcription, termination2.63E-03
60GO:0030091: protein repair2.63E-03
61GO:0009657: plastid organization3.00E-03
62GO:0001558: regulation of cell growth3.00E-03
63GO:0006783: heme biosynthetic process3.40E-03
64GO:0051865: protein autoubiquitination3.40E-03
65GO:0042761: very long-chain fatty acid biosynthetic process3.81E-03
66GO:0009644: response to high light intensity4.14E-03
67GO:0006782: protoporphyrinogen IX biosynthetic process4.23E-03
68GO:0008361: regulation of cell size5.13E-03
69GO:0010582: floral meristem determinacy5.13E-03
70GO:0006006: glucose metabolic process5.60E-03
71GO:0009718: anthocyanin-containing compound biosynthetic process5.60E-03
72GO:0006094: gluconeogenesis5.60E-03
73GO:0010102: lateral root morphogenesis5.60E-03
74GO:0045454: cell redox homeostasis5.73E-03
75GO:0046686: response to cadmium ion5.76E-03
76GO:0010143: cutin biosynthetic process6.09E-03
77GO:0010025: wax biosynthetic process7.10E-03
78GO:0006289: nucleotide-excision repair7.63E-03
79GO:0009944: polarity specification of adaxial/abaxial axis7.63E-03
80GO:0009768: photosynthesis, light harvesting in photosystem I8.18E-03
81GO:0051302: regulation of cell division8.18E-03
82GO:0007017: microtubule-based process8.18E-03
83GO:0019915: lipid storage8.73E-03
84GO:0061077: chaperone-mediated protein folding8.73E-03
85GO:0030245: cellulose catabolic process9.30E-03
86GO:2000022: regulation of jasmonic acid mediated signaling pathway9.30E-03
87GO:0001944: vasculature development9.89E-03
88GO:0009686: gibberellin biosynthetic process9.89E-03
89GO:0009414: response to water deprivation9.90E-03
90GO:0006633: fatty acid biosynthetic process1.15E-02
91GO:0042335: cuticle development1.17E-02
92GO:0055114: oxidation-reduction process1.25E-02
93GO:0048825: cotyledon development1.37E-02
94GO:0000302: response to reactive oxygen species1.43E-02
95GO:0030163: protein catabolic process1.57E-02
96GO:0009409: response to cold1.62E-02
97GO:0006310: DNA recombination1.64E-02
98GO:0009911: positive regulation of flower development1.86E-02
99GO:0009607: response to biotic stimulus1.94E-02
100GO:0015995: chlorophyll biosynthetic process2.09E-02
101GO:0016049: cell growth2.17E-02
102GO:0018298: protein-chromophore linkage2.25E-02
103GO:0000160: phosphorelay signal transduction system2.33E-02
104GO:0010218: response to far red light2.41E-02
105GO:0009631: cold acclimation2.49E-02
106GO:0010119: regulation of stomatal movement2.49E-02
107GO:0009637: response to blue light2.66E-02
108GO:0034599: cellular response to oxidative stress2.75E-02
109GO:0006631: fatty acid metabolic process3.01E-02
110GO:0010114: response to red light3.19E-02
111GO:0009640: photomorphogenesis3.19E-02
112GO:0008283: cell proliferation3.19E-02
113GO:0009965: leaf morphogenesis3.47E-02
114GO:0006855: drug transmembrane transport3.56E-02
115GO:0000165: MAPK cascade3.65E-02
116GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.65E-02
117GO:0009664: plant-type cell wall organization3.75E-02
118GO:0006979: response to oxidative stress3.78E-02
119GO:0009585: red, far-red light phototransduction3.94E-02
120GO:0006857: oligopeptide transport4.14E-02
121GO:0006096: glycolytic process4.44E-02
122GO:0009740: gibberellic acid mediated signaling pathway4.85E-02
RankGO TermAdjusted P value
1GO:0009899: ent-kaurene synthase activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0004134: 4-alpha-glucanotransferase activity0.00E+00
4GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.46E-04
5GO:0000829: inositol heptakisphosphate kinase activity1.46E-04
6GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.46E-04
7GO:0008184: glycogen phosphorylase activity1.46E-04
8GO:0000828: inositol hexakisphosphate kinase activity1.46E-04
9GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity1.46E-04
10GO:0004853: uroporphyrinogen decarboxylase activity1.46E-04
11GO:0004645: phosphorylase activity1.46E-04
12GO:0044390: ubiquitin-like protein conjugating enzyme binding3.33E-04
13GO:0010297: heteropolysaccharide binding3.33E-04
14GO:0050736: O-malonyltransferase activity3.33E-04
15GO:0018708: thiol S-methyltransferase activity3.33E-04
16GO:0004364: glutathione transferase activity4.24E-04
17GO:0017108: 5'-flap endonuclease activity5.47E-04
18GO:0045174: glutathione dehydrogenase (ascorbate) activity5.47E-04
19GO:0080054: low-affinity nitrate transmembrane transporter activity5.47E-04
20GO:0017150: tRNA dihydrouridine synthase activity5.47E-04
21GO:0050734: hydroxycinnamoyltransferase activity5.47E-04
22GO:0042277: peptide binding1.04E-03
23GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway1.04E-03
24GO:0019199: transmembrane receptor protein kinase activity1.04E-03
25GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.31E-03
26GO:2001070: starch binding1.61E-03
27GO:0004332: fructose-bisphosphate aldolase activity1.61E-03
28GO:0004130: cytochrome-c peroxidase activity1.61E-03
29GO:0009055: electron carrier activity1.64E-03
30GO:0004602: glutathione peroxidase activity1.93E-03
31GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.93E-03
32GO:0030674: protein binding, bridging2.63E-03
33GO:0016209: antioxidant activity2.63E-03
34GO:0008271: secondary active sulfate transmembrane transporter activity3.00E-03
35GO:0044183: protein binding involved in protein folding4.67E-03
36GO:0015116: sulfate transmembrane transporter activity5.13E-03
37GO:0004022: alcohol dehydrogenase (NAD) activity5.60E-03
38GO:0004089: carbonate dehydratase activity5.60E-03
39GO:0004565: beta-galactosidase activity5.60E-03
40GO:0004190: aspartic-type endopeptidase activity6.59E-03
41GO:0102337: 3-oxo-cerotoyl-CoA synthase activity7.10E-03
42GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity7.10E-03
43GO:0031409: pigment binding7.10E-03
44GO:0102336: 3-oxo-arachidoyl-CoA synthase activity7.10E-03
45GO:0015035: protein disulfide oxidoreductase activity7.54E-03
46GO:0019843: rRNA binding9.17E-03
47GO:0008810: cellulase activity9.89E-03
48GO:0003713: transcription coactivator activity1.24E-02
49GO:0048038: quinone binding1.43E-02
50GO:0004518: nuclease activity1.50E-02
51GO:0000156: phosphorelay response regulator activity1.57E-02
52GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.61E-02
53GO:0005200: structural constituent of cytoskeleton1.72E-02
54GO:0016168: chlorophyll binding1.94E-02
55GO:0016740: transferase activity1.99E-02
56GO:0004871: signal transducer activity3.06E-02
57GO:0051537: 2 iron, 2 sulfur cluster binding3.37E-02
58GO:0043621: protein self-association3.37E-02
59GO:0015293: symporter activity3.47E-02
60GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.54E-02
61GO:0016874: ligase activity4.85E-02
RankGO TermAdjusted P value
1GO:0033557: Slx1-Slx4 complex0.00E+00
2GO:0009535: chloroplast thylakoid membrane1.38E-07
3GO:0009507: chloroplast3.19E-07
4GO:0009534: chloroplast thylakoid3.78E-06
5GO:0009570: chloroplast stroma5.49E-06
6GO:0009941: chloroplast envelope6.11E-06
7GO:0009579: thylakoid3.37E-05
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.56E-04
9GO:0030093: chloroplast photosystem I3.33E-04
10GO:0031931: TORC1 complex5.47E-04
11GO:0036513: Derlin-1 retrotranslocation complex7.83E-04
12GO:0009523: photosystem II1.19E-03
13GO:0010287: plastoglobule1.25E-03
14GO:0005798: Golgi-associated vesicle1.61E-03
15GO:0009533: chloroplast stromal thylakoid2.27E-03
16GO:0009501: amyloplast2.63E-03
17GO:0009538: photosystem I reaction center2.63E-03
18GO:0045298: tubulin complex3.40E-03
19GO:0031977: thylakoid lumen3.53E-03
20GO:0009508: plastid chromosome5.60E-03
21GO:0030095: chloroplast photosystem II6.09E-03
22GO:0030076: light-harvesting complex6.59E-03
23GO:0005769: early endosome7.10E-03
24GO:0009543: chloroplast thylakoid lumen9.17E-03
25GO:0009522: photosystem I1.30E-02
26GO:0010319: stromule1.72E-02
27GO:0009295: nucleoid1.72E-02
28GO:0015934: large ribosomal subunit2.49E-02
29GO:0016020: membrane2.83E-02
30GO:0005840: ribosome3.97E-02
31GO:0005834: heterotrimeric G-protein complex4.65E-02
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Gene type



Gene DE type