co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G19220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
2	GO:0009877: nodulation	0.00E+00
3	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
4	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
5	GO:0016553: base conversion or substitution editing	0.00E+00
6	GO:0090627: plant epidermal cell differentiation	0.00E+00
7	GO:0015717: triose phosphate transport	0.00E+00
8	GO:0000023: maltose metabolic process	0.00E+00
9	GO:0002184: cytoplasmic translational termination	0.00E+00
10	GO:0019323: pentose catabolic process	0.00E+00
11	GO:0009735: response to cytokinin	1.55E-12
12	GO:0032544: plastid translation	2.95E-10
13	GO:0006412: translation	4.02E-09
14	GO:0010027: thylakoid membrane organization	2.08E-08
15	GO:0015979: photosynthesis	4.37E-08
16	GO:0042254: ribosome biogenesis	1.85E-07
17	GO:0010025: wax biosynthetic process	1.09E-06
18	GO:0009409: response to cold	1.65E-06
19	GO:0010206: photosystem II repair	7.07E-06
20	GO:0005983: starch catabolic process	2.07E-05
21	GO:0010021: amylopectin biosynthetic process	3.35E-05
22	GO:0019464: glycine decarboxylation via glycine cleavage system	3.35E-05
23	GO:0009817: defense response to fungus, incompatible interaction	3.88E-05
24	GO:0009913: epidermal cell differentiation	7.90E-05
25	GO:0042335: cuticle development	1.37E-04
26	GO:0010196: nonphotochemical quenching	1.45E-04
27	GO:0005978: glycogen biosynthetic process	1.85E-04
28	GO:0019252: starch biosynthetic process	1.87E-04
29	GO:0043489: RNA stabilization	2.16E-04
30	GO:0044262: cellular carbohydrate metabolic process	2.16E-04
31	GO:0032958: inositol phosphate biosynthetic process	2.16E-04
32	GO:0000025: maltose catabolic process	2.16E-04
33	GO:0009658: chloroplast organization	2.48E-04
34	GO:0042761: very long-chain fatty acid biosynthetic process	3.31E-04
35	GO:0015995: chlorophyll biosynthetic process	4.21E-04
36	GO:0000038: very long-chain fatty acid metabolic process	4.49E-04
37	GO:0009629: response to gravity	4.81E-04
38	GO:0005976: polysaccharide metabolic process	4.81E-04
39	GO:0007154: cell communication	4.81E-04
40	GO:0030388: fructose 1,6-bisphosphate metabolic process	4.81E-04
41	GO:0010270: photosystem II oxygen evolving complex assembly	4.81E-04
42	GO:0006000: fructose metabolic process	7.83E-04
43	GO:0010581: regulation of starch biosynthetic process	7.83E-04
44	GO:0006518: peptide metabolic process	7.83E-04
45	GO:0035436: triose phosphate transmembrane transport	7.83E-04
46	GO:0090153: regulation of sphingolipid biosynthetic process	7.83E-04
47	GO:0016050: vesicle organization	7.83E-04
48	GO:0006289: nucleotide-excision repair	9.02E-04
49	GO:0006241: CTP biosynthetic process	1.12E-03
50	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.12E-03
51	GO:0006165: nucleoside diphosphate phosphorylation	1.12E-03
52	GO:0006228: UTP biosynthetic process	1.12E-03
53	GO:0010731: protein glutathionylation	1.12E-03
54	GO:0006424: glutamyl-tRNA aminoacylation	1.12E-03
55	GO:1902358: sulfate transmembrane transport	1.12E-03
56	GO:0006020: inositol metabolic process	1.12E-03
57	GO:0006284: base-excision repair	1.40E-03
58	GO:0046686: response to cadmium ion	1.46E-03
59	GO:0010600: regulation of auxin biosynthetic process	1.48E-03
60	GO:2000122: negative regulation of stomatal complex development	1.48E-03
61	GO:0015713: phosphoglycerate transport	1.48E-03
62	GO:0010037: response to carbon dioxide	1.48E-03
63	GO:0015976: carbon utilization	1.48E-03
64	GO:0010023: proanthocyanidin biosynthetic process	1.48E-03
65	GO:0009765: photosynthesis, light harvesting	1.48E-03
66	GO:0006183: GTP biosynthetic process	1.48E-03
67	GO:0045727: positive regulation of translation	1.48E-03
68	GO:0006544: glycine metabolic process	1.89E-03
69	GO:0032543: mitochondrial translation	1.89E-03
70	GO:0006461: protein complex assembly	1.89E-03
71	GO:0009435: NAD biosynthetic process	1.89E-03
72	GO:0042742: defense response to bacterium	2.00E-03
73	GO:0006828: manganese ion transport	2.33E-03
74	GO:0009643: photosynthetic acclimation	2.33E-03
75	GO:0006563: L-serine metabolic process	2.33E-03
76	GO:0010304: PSII associated light-harvesting complex II catabolic process	2.33E-03
77	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.33E-03
78	GO:0000470: maturation of LSU-rRNA	2.33E-03
79	GO:0030163: protein catabolic process	2.46E-03
80	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.80E-03
81	GO:1901259: chloroplast rRNA processing	2.80E-03
82	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.80E-03
83	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.80E-03
84	GO:0009955: adaxial/abaxial pattern specification	2.80E-03
85	GO:0008272: sulfate transport	3.30E-03
86	GO:0050829: defense response to Gram-negative bacterium	3.30E-03
87	GO:0009645: response to low light intensity stimulus	3.30E-03
88	GO:0010161: red light signaling pathway	3.30E-03
89	GO:0010928: regulation of auxin mediated signaling pathway	3.82E-03
90	GO:0008610: lipid biosynthetic process	3.82E-03
91	GO:0009704: de-etiolation	3.82E-03
92	GO:0048564: photosystem I assembly	3.82E-03
93	GO:0019430: removal of superoxide radicals	4.38E-03
94	GO:0009657: plastid organization	4.38E-03
95	GO:0006002: fructose 6-phosphate metabolic process	4.38E-03
96	GO:0006783: heme biosynthetic process	4.95E-03
97	GO:0009853: photorespiration	5.14E-03
98	GO:0010380: regulation of chlorophyll biosynthetic process	5.56E-03
99	GO:0005982: starch metabolic process	5.56E-03
100	GO:0010205: photoinhibition	5.56E-03
101	GO:0035999: tetrahydrofolate interconversion	5.56E-03
102	GO:0006782: protoporphyrinogen IX biosynthetic process	6.18E-03
103	GO:0006508: proteolysis	6.39E-03
104	GO:0006816: calcium ion transport	6.84E-03
105	GO:0009773: photosynthetic electron transport in photosystem I	6.84E-03
106	GO:0072593: reactive oxygen species metabolic process	6.84E-03
107	GO:0043085: positive regulation of catalytic activity	6.84E-03
108	GO:0006415: translational termination	6.84E-03
109	GO:0009750: response to fructose	6.84E-03
110	GO:0018119: peptidyl-cysteine S-nitrosylation	6.84E-03
111	GO:0016485: protein processing	6.84E-03
112	GO:0009644: response to high light intensity	7.17E-03
113	GO:0010102: lateral root morphogenesis	8.22E-03
114	GO:0006807: nitrogen compound metabolic process	8.22E-03
115	GO:0009718: anthocyanin-containing compound biosynthetic process	8.22E-03
116	GO:0006094: gluconeogenesis	8.22E-03
117	GO:0009767: photosynthetic electron transport chain	8.22E-03
118	GO:0005986: sucrose biosynthetic process	8.22E-03
119	GO:0010020: chloroplast fission	8.94E-03
120	GO:0010207: photosystem II assembly	8.94E-03
121	GO:0009585: red, far-red light phototransduction	8.94E-03
122	GO:0019253: reductive pentose-phosphate cycle	8.94E-03
123	GO:0080167: response to karrikin	9.22E-03
124	GO:0000027: ribosomal large subunit assembly	1.12E-02
125	GO:0045454: cell redox homeostasis	1.16E-02
126	GO:0006418: tRNA aminoacylation for protein translation	1.21E-02
127	GO:0009768: photosynthesis, light harvesting in photosystem I	1.21E-02
128	GO:0009624: response to nematode	1.28E-02
129	GO:0016114: terpenoid biosynthetic process	1.29E-02
130	GO:0035428: hexose transmembrane transport	1.37E-02
131	GO:0030245: cellulose catabolic process	1.37E-02
132	GO:0010017: red or far-red light signaling pathway	1.37E-02
133	GO:0009411: response to UV	1.46E-02
134	GO:0009306: protein secretion	1.55E-02
135	GO:0008152: metabolic process	1.71E-02
136	GO:0042744: hydrogen peroxide catabolic process	1.82E-02
137	GO:0048868: pollen tube development	1.83E-02
138	GO:0046323: glucose import	1.83E-02
139	GO:0009790: embryo development	1.87E-02
140	GO:0015986: ATP synthesis coupled proton transport	1.93E-02
141	GO:0006633: fatty acid biosynthetic process	2.01E-02
142	GO:0048825: cotyledon development	2.02E-02
143	GO:0000302: response to reactive oxygen species	2.12E-02
144	GO:0007623: circadian rhythm	2.21E-02
145	GO:0006979: response to oxidative stress	2.39E-02
146	GO:0048573: photoperiodism, flowering	3.10E-02
147	GO:0009416: response to light stimulus	3.11E-02
148	GO:0016311: dephosphorylation	3.22E-02
149	GO:0048481: plant ovule development	3.34E-02
150	GO:0018298: protein-chromophore linkage	3.34E-02
151	GO:0009813: flavonoid biosynthetic process	3.46E-02
152	GO:0010218: response to far red light	3.58E-02
153	GO:0010119: regulation of stomatal movement	3.70E-02
154	GO:0009631: cold acclimation	3.70E-02
155	GO:0045087: innate immune response	3.95E-02
156	GO:0009637: response to blue light	3.95E-02
157	GO:0034599: cellular response to oxidative stress	4.07E-02
158	GO:0005975: carbohydrate metabolic process	4.33E-02
159	GO:0006631: fatty acid metabolic process	4.46E-02
160	GO:0042542: response to hydrogen peroxide	4.59E-02
161	GO:0010114: response to red light	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005363: maltose transmembrane transporter activity	0.00E+00
2	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
3	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
4	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
5	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
6	GO:0051738: xanthophyll binding	0.00E+00
7	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
8	GO:0019843: rRNA binding	1.68E-16
9	GO:0003735: structural constituent of ribosome	2.32E-11
10	GO:0008266: poly(U) RNA binding	6.41E-07
11	GO:0004222: metalloendopeptidase activity	4.71E-05
12	GO:0051920: peroxiredoxin activity	1.10E-04
13	GO:0016209: antioxidant activity	1.85E-04
14	GO:0000828: inositol hexakisphosphate kinase activity	2.16E-04
15	GO:0004856: xylulokinase activity	2.16E-04
16	GO:0009496: plastoquinol--plastocyanin reductase activity	2.16E-04
17	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.16E-04
18	GO:0004134: 4-alpha-glucanotransferase activity	2.16E-04
19	GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity	2.16E-04
20	GO:0004853: uroporphyrinogen decarboxylase activity	2.16E-04
21	GO:0008158: hedgehog receptor activity	2.16E-04
22	GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity	2.16E-04
23	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.16E-04
24	GO:0000829: inositol heptakisphosphate kinase activity	2.16E-04
25	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.16E-04
26	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	2.16E-04
27	GO:0018708: thiol S-methyltransferase activity	4.81E-04
28	GO:0003844: 1,4-alpha-glucan branching enzyme activity	4.81E-04
29	GO:0008967: phosphoglycolate phosphatase activity	4.81E-04
30	GO:0004618: phosphoglycerate kinase activity	4.81E-04
31	GO:0010297: heteropolysaccharide binding	4.81E-04
32	GO:0033201: alpha-1,4-glucan synthase activity	4.81E-04
33	GO:0004750: ribulose-phosphate 3-epimerase activity	4.81E-04
34	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	4.81E-04
35	GO:0043169: cation binding	7.83E-04
36	GO:0004373: glycogen (starch) synthase activity	7.83E-04
37	GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity	7.83E-04
38	GO:0002161: aminoacyl-tRNA editing activity	7.83E-04
39	GO:0005504: fatty acid binding	7.83E-04
40	GO:0004148: dihydrolipoyl dehydrogenase activity	7.83E-04
41	GO:0045174: glutathione dehydrogenase (ascorbate) activity	7.83E-04
42	GO:0030267: glyoxylate reductase (NADP) activity	7.83E-04
43	GO:0071917: triose-phosphate transmembrane transporter activity	7.83E-04
44	GO:0004324: ferredoxin-NADP+ reductase activity	7.83E-04
45	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.16E-04
46	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.16E-04
47	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.16E-04
48	GO:0005528: FK506 binding	9.02E-04
49	GO:0016851: magnesium chelatase activity	1.12E-03
50	GO:0016149: translation release factor activity, codon specific	1.12E-03
51	GO:0004550: nucleoside diphosphate kinase activity	1.12E-03
52	GO:0043023: ribosomal large subunit binding	1.12E-03
53	GO:0004375: glycine dehydrogenase (decarboxylating) activity	1.12E-03
54	GO:0019201: nucleotide kinase activity	1.12E-03
55	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.48E-03
56	GO:0045430: chalcone isomerase activity	1.48E-03
57	GO:0009011: starch synthase activity	1.48E-03
58	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.48E-03
59	GO:0015120: phosphoglycerate transmembrane transporter activity	1.48E-03
60	GO:0019104: DNA N-glycosylase activity	1.48E-03
61	GO:0004372: glycine hydroxymethyltransferase activity	1.89E-03
62	GO:0003959: NADPH dehydrogenase activity	1.89E-03
63	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.89E-03
64	GO:0050662: coenzyme binding	1.89E-03
65	GO:0008725: DNA-3-methyladenine glycosylase activity	1.89E-03
66	GO:0004130: cytochrome-c peroxidase activity	2.33E-03
67	GO:2001070: starch binding	2.33E-03
68	GO:0008237: metallopeptidase activity	2.78E-03
69	GO:0004017: adenylate kinase activity	2.80E-03
70	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.80E-03
71	GO:0004602: glutathione peroxidase activity	2.80E-03
72	GO:0016168: chlorophyll binding	3.30E-03
73	GO:0008236: serine-type peptidase activity	3.86E-03
74	GO:0015078: hydrogen ion transmembrane transporter activity	4.38E-03
75	GO:0008271: secondary active sulfate transmembrane transporter activity	4.38E-03
76	GO:0003747: translation release factor activity	4.95E-03
77	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.46E-03
78	GO:0005384: manganese ion transmembrane transporter activity	5.56E-03
79	GO:0008047: enzyme activator activity	6.18E-03
80	GO:0015386: potassium:proton antiporter activity	6.84E-03
81	GO:0004601: peroxidase activity	7.01E-03
82	GO:0000049: tRNA binding	7.51E-03
83	GO:0015116: sulfate transmembrane transporter activity	7.51E-03
84	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.74E-03
85	GO:0004022: alcohol dehydrogenase (NAD) activity	8.22E-03
86	GO:0004089: carbonate dehydratase activity	8.22E-03
87	GO:0015095: magnesium ion transmembrane transporter activity	8.22E-03
88	GO:0031072: heat shock protein binding	8.22E-03
89	GO:0031409: pigment binding	1.05E-02
90	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.09E-02
91	GO:0016491: oxidoreductase activity	1.13E-02
92	GO:0015079: potassium ion transmembrane transporter activity	1.21E-02
93	GO:0004176: ATP-dependent peptidase activity	1.29E-02
94	GO:0008810: cellulase activity	1.46E-02
95	GO:0022891: substrate-specific transmembrane transporter activity	1.46E-02
96	GO:0004812: aminoacyl-tRNA ligase activity	1.64E-02
97	GO:0004252: serine-type endopeptidase activity	1.78E-02
98	GO:0005355: glucose transmembrane transporter activity	1.93E-02
99	GO:0004791: thioredoxin-disulfide reductase activity	1.93E-02
100	GO:0048038: quinone binding	2.12E-02
101	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.33E-02
102	GO:0003684: damaged DNA binding	2.44E-02
103	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.34E-02
104	GO:0016740: transferase activity	3.98E-02
105	GO:0008233: peptidase activity	4.16E-02
106	GO:0003729: mRNA binding	4.21E-02
107	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.38E-02
108	GO:0004364: glutathione transferase activity	4.59E-02
109	GO:0051537: 2 iron, 2 sulfur cluster binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0030931: heterotetrameric ADPG pyrophosphorylase complex	0.00E+00
2	GO:0009571: proplastid stroma	0.00E+00
3	GO:0098572: stromal side of plastid thylakoid membrane	0.00E+00
4	GO:0009507: chloroplast	4.44E-57
5	GO:0009941: chloroplast envelope	3.12E-54
6	GO:0009570: chloroplast stroma	1.51E-50
7	GO:0009534: chloroplast thylakoid	6.93E-43
8	GO:0009535: chloroplast thylakoid membrane	4.44E-33
9	GO:0009579: thylakoid	1.87E-31
10	GO:0005840: ribosome	3.14E-11
11	GO:0031977: thylakoid lumen	5.65E-09
12	GO:0010287: plastoglobule	6.42E-09
13	GO:0009543: chloroplast thylakoid lumen	8.03E-09
14	GO:0016020: membrane	4.06E-08
15	GO:0010319: stromule	5.96E-07
16	GO:0009706: chloroplast inner membrane	1.87E-06
17	GO:0009533: chloroplast stromal thylakoid	2.27E-06
18	GO:0009295: nucleoid	1.79E-05
19	GO:0009508: plastid chromosome	2.58E-05
20	GO:0031969: chloroplast membrane	5.48E-05
21	GO:0009538: photosystem I reaction center	1.85E-04
22	GO:0009501: amyloplast	1.85E-04
23	GO:0009523: photosystem II	1.87E-04
24	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	2.16E-04
25	GO:0048046: apoplast	3.84E-04
26	GO:0030093: chloroplast photosystem I	4.81E-04
27	GO:0000311: plastid large ribosomal subunit	5.15E-04
28	GO:0010007: magnesium chelatase complex	7.83E-04
29	GO:0005960: glycine cleavage complex	1.12E-03
30	GO:0009517: PSII associated light-harvesting complex II	1.48E-03
31	GO:0009512: cytochrome b6f complex	1.89E-03
32	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	2.33E-03
33	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.95E-03
34	GO:0042644: chloroplast nucleoid	4.95E-03
35	GO:0005763: mitochondrial small ribosomal subunit	4.95E-03
36	GO:0030095: chloroplast photosystem II	8.94E-03
37	GO:0000312: plastid small ribosomal subunit	8.94E-03
38	GO:0030076: light-harvesting complex	9.69E-03
39	GO:0022625: cytosolic large ribosomal subunit	9.83E-03
40	GO:0009536: plastid	1.00E-02
41	GO:0015935: small ribosomal subunit	1.29E-02
42	GO:0009522: photosystem I	1.93E-02
43	GO:0005759: mitochondrial matrix	2.01E-02
44	GO:0071944: cell periphery	2.33E-02
45	GO:0030529: intracellular ribonucleoprotein complex	2.76E-02
46	GO:0022626: cytosolic ribosome	2.94E-02
47	GO:0015934: large ribosomal subunit	3.70E-02