GO Enrichment Analysis of Co-expressed Genes with
AT5G17770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080053: response to phenylalanine | 0.00E+00 |
| 2 | GO:0033587: shikimate biosynthetic process | 0.00E+00 |
| 3 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 4 | GO:0017126: nucleologenesis | 0.00E+00 |
| 5 | GO:0043201: response to leucine | 0.00E+00 |
| 6 | GO:0080052: response to histidine | 0.00E+00 |
| 7 | GO:0006412: translation | 1.07E-06 |
| 8 | GO:0045039: protein import into mitochondrial inner membrane | 2.22E-06 |
| 9 | GO:0006413: translational initiation | 8.95E-06 |
| 10 | GO:1901430: positive regulation of syringal lignin biosynthetic process | 1.06E-04 |
| 11 | GO:0009820: alkaloid metabolic process | 1.06E-04 |
| 12 | GO:0010365: positive regulation of ethylene biosynthetic process | 1.06E-04 |
| 13 | GO:0000494: box C/D snoRNA 3'-end processing | 1.06E-04 |
| 14 | GO:0019877: diaminopimelate biosynthetic process | 1.06E-04 |
| 15 | GO:1990258: histone glutamine methylation | 1.06E-04 |
| 16 | GO:0006099: tricarboxylic acid cycle | 1.90E-04 |
| 17 | GO:0042939: tripeptide transport | 2.48E-04 |
| 18 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.48E-04 |
| 19 | GO:0045905: positive regulation of translational termination | 2.48E-04 |
| 20 | GO:0045901: positive regulation of translational elongation | 2.48E-04 |
| 21 | GO:0015802: basic amino acid transport | 2.48E-04 |
| 22 | GO:0006452: translational frameshifting | 2.48E-04 |
| 23 | GO:0006364: rRNA processing | 3.76E-04 |
| 24 | GO:0006421: asparaginyl-tRNA aminoacylation | 4.12E-04 |
| 25 | GO:0008652: cellular amino acid biosynthetic process | 4.12E-04 |
| 26 | GO:0006556: S-adenosylmethionine biosynthetic process | 4.12E-04 |
| 27 | GO:0009413: response to flooding | 5.92E-04 |
| 28 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 5.92E-04 |
| 29 | GO:0009855: determination of bilateral symmetry | 5.92E-04 |
| 30 | GO:0042938: dipeptide transport | 7.86E-04 |
| 31 | GO:0051781: positive regulation of cell division | 7.86E-04 |
| 32 | GO:0051365: cellular response to potassium ion starvation | 7.86E-04 |
| 33 | GO:0042274: ribosomal small subunit biogenesis | 7.86E-04 |
| 34 | GO:0042273: ribosomal large subunit biogenesis | 7.86E-04 |
| 35 | GO:0051205: protein insertion into membrane | 7.86E-04 |
| 36 | GO:0042744: hydrogen peroxide catabolic process | 9.16E-04 |
| 37 | GO:0006564: L-serine biosynthetic process | 9.92E-04 |
| 38 | GO:0006461: protein complex assembly | 9.92E-04 |
| 39 | GO:0009164: nucleoside catabolic process | 9.92E-04 |
| 40 | GO:0031167: rRNA methylation | 9.92E-04 |
| 41 | GO:0006979: response to oxidative stress | 1.24E-03 |
| 42 | GO:0009423: chorismate biosynthetic process | 1.45E-03 |
| 43 | GO:0009735: response to cytokinin | 1.58E-03 |
| 44 | GO:1900057: positive regulation of leaf senescence | 1.70E-03 |
| 45 | GO:0080186: developmental vegetative growth | 1.70E-03 |
| 46 | GO:0050829: defense response to Gram-negative bacterium | 1.70E-03 |
| 47 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.97E-03 |
| 48 | GO:0042254: ribosome biogenesis | 2.05E-03 |
| 49 | GO:0001510: RNA methylation | 2.24E-03 |
| 50 | GO:0010497: plasmodesmata-mediated intercellular transport | 2.24E-03 |
| 51 | GO:0006754: ATP biosynthetic process | 2.53E-03 |
| 52 | GO:0006098: pentose-phosphate shunt | 2.53E-03 |
| 53 | GO:2000280: regulation of root development | 2.84E-03 |
| 54 | GO:0010162: seed dormancy process | 3.15E-03 |
| 55 | GO:0009809: lignin biosynthetic process | 3.35E-03 |
| 56 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.47E-03 |
| 57 | GO:0009073: aromatic amino acid family biosynthetic process | 3.47E-03 |
| 58 | GO:0006913: nucleocytoplasmic transport | 3.47E-03 |
| 59 | GO:0009682: induced systemic resistance | 3.47E-03 |
| 60 | GO:0052544: defense response by callose deposition in cell wall | 3.47E-03 |
| 61 | GO:0071365: cellular response to auxin stimulus | 3.81E-03 |
| 62 | GO:0006820: anion transport | 3.81E-03 |
| 63 | GO:0006626: protein targeting to mitochondrion | 4.16E-03 |
| 64 | GO:0006108: malate metabolic process | 4.16E-03 |
| 65 | GO:0009887: animal organ morphogenesis | 4.52E-03 |
| 66 | GO:0000162: tryptophan biosynthetic process | 5.26E-03 |
| 67 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.65E-03 |
| 68 | GO:0051302: regulation of cell division | 6.05E-03 |
| 69 | GO:0003333: amino acid transmembrane transport | 6.46E-03 |
| 70 | GO:0016998: cell wall macromolecule catabolic process | 6.46E-03 |
| 71 | GO:0048511: rhythmic process | 6.46E-03 |
| 72 | GO:0016226: iron-sulfur cluster assembly | 6.87E-03 |
| 73 | GO:0006730: one-carbon metabolic process | 6.87E-03 |
| 74 | GO:0009294: DNA mediated transformation | 7.30E-03 |
| 75 | GO:0040007: growth | 7.30E-03 |
| 76 | GO:0009693: ethylene biosynthetic process | 7.30E-03 |
| 77 | GO:0010089: xylem development | 7.74E-03 |
| 78 | GO:0040008: regulation of growth | 7.82E-03 |
| 79 | GO:0008033: tRNA processing | 8.64E-03 |
| 80 | GO:0006606: protein import into nucleus | 8.64E-03 |
| 81 | GO:0015991: ATP hydrolysis coupled proton transport | 8.64E-03 |
| 82 | GO:0010197: polar nucleus fusion | 9.10E-03 |
| 83 | GO:0009960: endosperm development | 9.10E-03 |
| 84 | GO:0009617: response to bacterium | 9.79E-03 |
| 85 | GO:0009851: auxin biosynthetic process | 1.01E-02 |
| 86 | GO:0046686: response to cadmium ion | 1.04E-02 |
| 87 | GO:0009630: gravitropism | 1.11E-02 |
| 88 | GO:0071281: cellular response to iron ion | 1.16E-02 |
| 89 | GO:0051607: defense response to virus | 1.31E-02 |
| 90 | GO:0010029: regulation of seed germination | 1.42E-02 |
| 91 | GO:0009817: defense response to fungus, incompatible interaction | 1.65E-02 |
| 92 | GO:0006811: ion transport | 1.77E-02 |
| 93 | GO:0010043: response to zinc ion | 1.83E-02 |
| 94 | GO:0009793: embryo development ending in seed dormancy | 1.88E-02 |
| 95 | GO:0006869: lipid transport | 2.07E-02 |
| 96 | GO:0006839: mitochondrial transport | 2.14E-02 |
| 97 | GO:0008283: cell proliferation | 2.34E-02 |
| 98 | GO:0051707: response to other organism | 2.34E-02 |
| 99 | GO:0009753: response to jasmonic acid | 2.50E-02 |
| 100 | GO:0042538: hyperosmotic salinity response | 2.75E-02 |
| 101 | GO:0006857: oligopeptide transport | 3.04E-02 |
| 102 | GO:0009409: response to cold | 3.18E-02 |
| 103 | GO:0009651: response to salt stress | 3.24E-02 |
| 104 | GO:0006096: glycolytic process | 3.26E-02 |
| 105 | GO:0048367: shoot system development | 3.33E-02 |
| 106 | GO:0009620: response to fungus | 3.49E-02 |
| 107 | GO:0042545: cell wall modification | 3.64E-02 |
| 108 | GO:0009553: embryo sac development | 3.64E-02 |
| 109 | GO:0009611: response to wounding | 4.22E-02 |
| 110 | GO:0009058: biosynthetic process | 4.53E-02 |
| 111 | GO:0009790: embryo development | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003856: 3-dehydroquinate synthase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 6.20E-09 |
| 3 | GO:0003743: translation initiation factor activity | 1.56E-05 |
| 4 | GO:0048037: cofactor binding | 1.06E-04 |
| 5 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.06E-04 |
| 6 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.06E-04 |
| 7 | GO:1990259: histone-glutamine methyltransferase activity | 1.06E-04 |
| 8 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 1.06E-04 |
| 9 | GO:0008840: 4-hydroxy-tetrahydrodipicolinate synthase | 1.06E-04 |
| 10 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.06E-04 |
| 11 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.06E-04 |
| 12 | GO:0003746: translation elongation factor activity | 1.78E-04 |
| 13 | GO:0042937: tripeptide transporter activity | 2.48E-04 |
| 14 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.48E-04 |
| 15 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.48E-04 |
| 16 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.12E-04 |
| 17 | GO:0008649: rRNA methyltransferase activity | 4.12E-04 |
| 18 | GO:0004816: asparagine-tRNA ligase activity | 4.12E-04 |
| 19 | GO:0004478: methionine adenosyltransferase activity | 4.12E-04 |
| 20 | GO:0019201: nucleotide kinase activity | 5.92E-04 |
| 21 | GO:0004834: tryptophan synthase activity | 7.86E-04 |
| 22 | GO:0042936: dipeptide transporter activity | 7.86E-04 |
| 23 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.86E-04 |
| 24 | GO:0005496: steroid binding | 9.92E-04 |
| 25 | GO:0016615: malate dehydrogenase activity | 1.21E-03 |
| 26 | GO:0004017: adenylate kinase activity | 1.45E-03 |
| 27 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.45E-03 |
| 28 | GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.45E-03 |
| 29 | GO:0030060: L-malate dehydrogenase activity | 1.45E-03 |
| 30 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.54E-03 |
| 31 | GO:0030515: snoRNA binding | 1.70E-03 |
| 32 | GO:0043022: ribosome binding | 1.97E-03 |
| 33 | GO:0015288: porin activity | 1.97E-03 |
| 34 | GO:0004601: peroxidase activity | 2.00E-03 |
| 35 | GO:0008135: translation factor activity, RNA binding | 2.24E-03 |
| 36 | GO:0008308: voltage-gated anion channel activity | 2.24E-03 |
| 37 | GO:0046872: metal ion binding | 2.42E-03 |
| 38 | GO:0003729: mRNA binding | 2.46E-03 |
| 39 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.53E-03 |
| 40 | GO:0020037: heme binding | 2.73E-03 |
| 41 | GO:0030955: potassium ion binding | 2.84E-03 |
| 42 | GO:0004743: pyruvate kinase activity | 2.84E-03 |
| 43 | GO:0001055: RNA polymerase II activity | 2.84E-03 |
| 44 | GO:0001054: RNA polymerase I activity | 3.47E-03 |
| 45 | GO:0001056: RNA polymerase III activity | 3.81E-03 |
| 46 | GO:0015114: phosphate ion transmembrane transporter activity | 4.16E-03 |
| 47 | GO:0008083: growth factor activity | 4.52E-03 |
| 48 | GO:0051536: iron-sulfur cluster binding | 5.65E-03 |
| 49 | GO:0031418: L-ascorbic acid binding | 5.65E-03 |
| 50 | GO:0004407: histone deacetylase activity | 5.65E-03 |
| 51 | GO:0008565: protein transporter activity | 7.10E-03 |
| 52 | GO:0000166: nucleotide binding | 8.91E-03 |
| 53 | GO:0008536: Ran GTPase binding | 9.10E-03 |
| 54 | GO:0010181: FMN binding | 9.58E-03 |
| 55 | GO:0000287: magnesium ion binding | 1.25E-02 |
| 56 | GO:0016788: hydrolase activity, acting on ester bonds | 1.30E-02 |
| 57 | GO:0005507: copper ion binding | 1.40E-02 |
| 58 | GO:0030145: manganese ion binding | 1.83E-02 |
| 59 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.95E-02 |
| 60 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.14E-02 |
| 61 | GO:0015293: symporter activity | 2.54E-02 |
| 62 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.89E-02 |
| 63 | GO:0015171: amino acid transmembrane transporter activity | 3.11E-02 |
| 64 | GO:0045330: aspartyl esterase activity | 3.11E-02 |
| 65 | GO:0008289: lipid binding | 3.24E-02 |
| 66 | GO:0045735: nutrient reservoir activity | 3.26E-02 |
| 67 | GO:0030599: pectinesterase activity | 3.56E-02 |
| 68 | GO:0016887: ATPase activity | 3.61E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 3.80E-02 |
| 70 | GO:0016746: transferase activity, transferring acyl groups | 3.80E-02 |
| 71 | GO:0008026: ATP-dependent helicase activity | 3.88E-02 |
| 72 | GO:0003723: RNA binding | 4.23E-02 |
| 73 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005618: cell wall | 2.77E-08 |
| 3 | GO:0022627: cytosolic small ribosomal subunit | 1.17E-06 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 4.12E-06 |
| 5 | GO:0022626: cytosolic ribosome | 4.24E-06 |
| 6 | GO:0005840: ribosome | 5.85E-06 |
| 7 | GO:0005774: vacuolar membrane | 5.33E-05 |
| 8 | GO:0016020: membrane | 8.73E-05 |
| 9 | GO:0045252: oxoglutarate dehydrogenase complex | 1.06E-04 |
| 10 | GO:0005829: cytosol | 1.41E-04 |
| 11 | GO:0005730: nucleolus | 1.78E-04 |
| 12 | GO:0005773: vacuole | 2.06E-04 |
| 13 | GO:0009506: plasmodesma | 2.81E-04 |
| 14 | GO:0031428: box C/D snoRNP complex | 1.21E-03 |
| 15 | GO:0005794: Golgi apparatus | 1.93E-03 |
| 16 | GO:0046930: pore complex | 2.24E-03 |
| 17 | GO:0005736: DNA-directed RNA polymerase I complex | 2.53E-03 |
| 18 | GO:0005886: plasma membrane | 2.83E-03 |
| 19 | GO:0005666: DNA-directed RNA polymerase III complex | 2.84E-03 |
| 20 | GO:0015030: Cajal body | 2.84E-03 |
| 21 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.15E-03 |
| 22 | GO:0005852: eukaryotic translation initiation factor 3 complex | 3.47E-03 |
| 23 | GO:0031307: integral component of mitochondrial outer membrane | 3.81E-03 |
| 24 | GO:0032040: small-subunit processome | 3.81E-03 |
| 25 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.81E-03 |
| 26 | GO:0005743: mitochondrial inner membrane | 3.93E-03 |
| 27 | GO:0031012: extracellular matrix | 4.16E-03 |
| 28 | GO:0005783: endoplasmic reticulum | 4.30E-03 |
| 29 | GO:0000419: DNA-directed RNA polymerase V complex | 5.26E-03 |
| 30 | GO:0005758: mitochondrial intermembrane space | 5.65E-03 |
| 31 | GO:0005741: mitochondrial outer membrane | 6.46E-03 |
| 32 | GO:0015935: small ribosomal subunit | 6.46E-03 |
| 33 | GO:0009532: plastid stroma | 6.46E-03 |
| 34 | GO:0005739: mitochondrion | 9.65E-03 |
| 35 | GO:0031965: nuclear membrane | 1.01E-02 |
| 36 | GO:0016592: mediator complex | 1.11E-02 |
| 37 | GO:0009570: chloroplast stroma | 1.12E-02 |
| 38 | GO:0071944: cell periphery | 1.16E-02 |
| 39 | GO:0010319: stromule | 1.26E-02 |
| 40 | GO:0005737: cytoplasm | 1.60E-02 |
| 41 | GO:0009707: chloroplast outer membrane | 1.65E-02 |
| 42 | GO:0031902: late endosome membrane | 2.21E-02 |
| 43 | GO:0009536: plastid | 2.81E-02 |
| 44 | GO:0005635: nuclear envelope | 3.04E-02 |
| 45 | GO:0005834: heterotrimeric G-protein complex | 3.41E-02 |
| 46 | GO:0048046: apoplast | 3.65E-02 |
| 47 | GO:0005789: endoplasmic reticulum membrane | 3.69E-02 |
| 48 | GO:0005576: extracellular region | 4.07E-02 |
| 49 | GO:0009543: chloroplast thylakoid lumen | 4.36E-02 |