| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0033317: pantothenate biosynthetic process from valine | 0.00E+00 |
| 2 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 3 | GO:0010343: singlet oxygen-mediated programmed cell death | 0.00E+00 |
| 4 | GO:0015813: L-glutamate transport | 0.00E+00 |
| 5 | GO:0042304: regulation of fatty acid biosynthetic process | 0.00E+00 |
| 6 | GO:0071000: response to magnetism | 0.00E+00 |
| 7 | GO:0019279: L-methionine biosynthetic process from L-homoserine via cystathionine | 0.00E+00 |
| 8 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 9 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 10 | GO:0098586: cellular response to virus | 0.00E+00 |
| 11 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 12 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 13 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 14 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 15 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 16 | GO:1904215: regulation of protein import into chloroplast stroma | 0.00E+00 |
| 17 | GO:0009661: chromoplast organization | 0.00E+00 |
| 18 | GO:0046294: formaldehyde catabolic process | 0.00E+00 |
| 19 | GO:2000013: regulation of arginine biosynthetic process via ornithine | 0.00E+00 |
| 20 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 21 | GO:0051246: regulation of protein metabolic process | 0.00E+00 |
| 22 | GO:0009658: chloroplast organization | 9.11E-09 |
| 23 | GO:0010117: photoprotection | 3.16E-06 |
| 24 | GO:0016120: carotene biosynthetic process | 3.16E-06 |
| 25 | GO:0080005: photosystem stoichiometry adjustment | 9.75E-06 |
| 26 | GO:0080183: response to photooxidative stress | 9.75E-06 |
| 27 | GO:0015995: chlorophyll biosynthetic process | 2.30E-05 |
| 28 | GO:0048564: photosystem I assembly | 2.40E-05 |
| 29 | GO:0006013: mannose metabolic process | 3.33E-05 |
| 30 | GO:0033014: tetrapyrrole biosynthetic process | 7.17E-05 |
| 31 | GO:2001141: regulation of RNA biosynthetic process | 7.17E-05 |
| 32 | GO:0015743: malate transport | 1.25E-04 |
| 33 | GO:0009902: chloroplast relocation | 1.25E-04 |
| 34 | GO:0009767: photosynthetic electron transport chain | 1.47E-04 |
| 35 | GO:0000304: response to singlet oxygen | 1.92E-04 |
| 36 | GO:0046283: anthocyanin-containing compound metabolic process | 1.92E-04 |
| 37 | GO:0010190: cytochrome b6f complex assembly | 2.73E-04 |
| 38 | GO:0018298: protein-chromophore linkage | 2.99E-04 |
| 39 | GO:0009903: chloroplast avoidance movement | 3.65E-04 |
| 40 | GO:0016226: iron-sulfur cluster assembly | 4.10E-04 |
| 41 | GO:0006430: lysyl-tRNA aminoacylation | 4.70E-04 |
| 42 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 4.70E-04 |
| 43 | GO:0019343: cysteine biosynthetic process via cystathionine | 4.70E-04 |
| 44 | GO:0034970: histone H3-R2 methylation | 4.70E-04 |
| 45 | GO:0031426: polycistronic mRNA processing | 4.70E-04 |
| 46 | GO:0010362: negative regulation of anion channel activity by blue light | 4.70E-04 |
| 47 | GO:1904966: positive regulation of vitamin E biosynthetic process | 4.70E-04 |
| 48 | GO:0034972: histone H3-R26 methylation | 4.70E-04 |
| 49 | GO:0071266: 'de novo' L-methionine biosynthetic process | 4.70E-04 |
| 50 | GO:1902265: abscisic acid homeostasis | 4.70E-04 |
| 51 | GO:0071806: protein transmembrane transport | 4.70E-04 |
| 52 | GO:1904964: positive regulation of phytol biosynthetic process | 4.70E-04 |
| 53 | GO:0034971: histone H3-R17 methylation | 4.70E-04 |
| 54 | GO:0072387: flavin adenine dinucleotide metabolic process | 4.70E-04 |
| 55 | GO:0042371: vitamin K biosynthetic process | 4.70E-04 |
| 56 | GO:0071454: cellular response to anoxia | 4.70E-04 |
| 57 | GO:0071461: cellular response to redox state | 4.70E-04 |
| 58 | GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.70E-04 |
| 59 | GO:0019346: transsulfuration | 4.70E-04 |
| 60 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 5.86E-04 |
| 61 | GO:0010118: stomatal movement | 6.30E-04 |
| 62 | GO:0071482: cellular response to light stimulus | 7.14E-04 |
| 63 | GO:0032544: plastid translation | 7.14E-04 |
| 64 | GO:0009657: plastid organization | 7.14E-04 |
| 65 | GO:0009644: response to high light intensity | 7.36E-04 |
| 66 | GO:0080185: effector dependent induction by symbiont of host immune response | 1.01E-03 |
| 67 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.01E-03 |
| 68 | GO:0009638: phototropism | 1.01E-03 |
| 69 | GO:0019388: galactose catabolic process | 1.01E-03 |
| 70 | GO:0048314: embryo sac morphogenesis | 1.01E-03 |
| 71 | GO:0010617: circadian regulation of calcium ion oscillation | 1.01E-03 |
| 72 | GO:0006739: NADP metabolic process | 1.01E-03 |
| 73 | GO:1901529: positive regulation of anion channel activity | 1.01E-03 |
| 74 | GO:0007154: cell communication | 1.01E-03 |
| 75 | GO:0046741: transport of virus in host, tissue to tissue | 1.01E-03 |
| 76 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 1.01E-03 |
| 77 | GO:0000256: allantoin catabolic process | 1.01E-03 |
| 78 | GO:0060359: response to ammonium ion | 1.01E-03 |
| 79 | GO:0048255: mRNA stabilization | 1.01E-03 |
| 80 | GO:0099402: plant organ development | 1.01E-03 |
| 81 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.01E-03 |
| 82 | GO:2000030: regulation of response to red or far red light | 1.01E-03 |
| 83 | GO:0006996: organelle organization | 1.01E-03 |
| 84 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.01E-03 |
| 85 | GO:0006898: receptor-mediated endocytosis | 1.01E-03 |
| 86 | GO:0034755: iron ion transmembrane transport | 1.01E-03 |
| 87 | GO:2000071: regulation of defense response by callose deposition | 1.01E-03 |
| 88 | GO:0016122: xanthophyll metabolic process | 1.01E-03 |
| 89 | GO:1900426: positive regulation of defense response to bacterium | 1.01E-03 |
| 90 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 1.01E-03 |
| 91 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 1.01E-03 |
| 92 | GO:0006879: cellular iron ion homeostasis | 1.35E-03 |
| 93 | GO:0006352: DNA-templated transcription, initiation | 1.35E-03 |
| 94 | GO:0010027: thylakoid membrane organization | 1.44E-03 |
| 95 | GO:0009416: response to light stimulus | 1.50E-03 |
| 96 | GO:0031022: nuclear migration along microfilament | 1.65E-03 |
| 97 | GO:0010136: ureide catabolic process | 1.65E-03 |
| 98 | GO:1902448: positive regulation of shade avoidance | 1.65E-03 |
| 99 | GO:1901562: response to paraquat | 1.65E-03 |
| 100 | GO:0009150: purine ribonucleotide metabolic process | 1.65E-03 |
| 101 | GO:0015940: pantothenate biosynthetic process | 1.65E-03 |
| 102 | GO:0071836: nectar secretion | 1.65E-03 |
| 103 | GO:0008652: cellular amino acid biosynthetic process | 1.65E-03 |
| 104 | GO:1901672: positive regulation of systemic acquired resistance | 1.65E-03 |
| 105 | GO:0043157: response to cation stress | 1.65E-03 |
| 106 | GO:0005986: sucrose biosynthetic process | 1.76E-03 |
| 107 | GO:0010207: photosystem II assembly | 1.98E-03 |
| 108 | GO:0090351: seedling development | 2.22E-03 |
| 109 | GO:0071484: cellular response to light intensity | 2.39E-03 |
| 110 | GO:0009647: skotomorphogenesis | 2.39E-03 |
| 111 | GO:0015729: oxaloacetate transport | 2.39E-03 |
| 112 | GO:0046653: tetrahydrofolate metabolic process | 2.39E-03 |
| 113 | GO:0010239: chloroplast mRNA processing | 2.39E-03 |
| 114 | GO:0008615: pyridoxine biosynthetic process | 2.39E-03 |
| 115 | GO:1901332: negative regulation of lateral root development | 2.39E-03 |
| 116 | GO:0009590: detection of gravity | 2.39E-03 |
| 117 | GO:0050482: arachidonic acid secretion | 2.39E-03 |
| 118 | GO:0051289: protein homotetramerization | 2.39E-03 |
| 119 | GO:0006809: nitric oxide biosynthetic process | 2.39E-03 |
| 120 | GO:0006145: purine nucleobase catabolic process | 2.39E-03 |
| 121 | GO:0043572: plastid fission | 2.39E-03 |
| 122 | GO:0009963: positive regulation of flavonoid biosynthetic process | 2.39E-03 |
| 123 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.39E-03 |
| 124 | GO:0009067: aspartate family amino acid biosynthetic process | 2.39E-03 |
| 125 | GO:0010371: regulation of gibberellin biosynthetic process | 2.39E-03 |
| 126 | GO:0009637: response to blue light | 2.73E-03 |
| 127 | GO:0042274: ribosomal small subunit biogenesis | 3.22E-03 |
| 128 | GO:0009765: photosynthesis, light harvesting | 3.22E-03 |
| 129 | GO:0071483: cellular response to blue light | 3.22E-03 |
| 130 | GO:0006734: NADH metabolic process | 3.22E-03 |
| 131 | GO:1902347: response to strigolactone | 3.22E-03 |
| 132 | GO:0006552: leucine catabolic process | 3.22E-03 |
| 133 | GO:0034613: cellular protein localization | 3.22E-03 |
| 134 | GO:0010021: amylopectin biosynthetic process | 3.22E-03 |
| 135 | GO:0009649: entrainment of circadian clock | 3.22E-03 |
| 136 | GO:0006808: regulation of nitrogen utilization | 3.22E-03 |
| 137 | GO:0070534: protein K63-linked ubiquitination | 3.22E-03 |
| 138 | GO:0019676: ammonia assimilation cycle | 3.22E-03 |
| 139 | GO:0015979: photosynthesis | 3.62E-03 |
| 140 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.66E-03 |
| 141 | GO:0055114: oxidation-reduction process | 3.73E-03 |
| 142 | GO:0009640: photomorphogenesis | 3.78E-03 |
| 143 | GO:0009744: response to sucrose | 3.78E-03 |
| 144 | GO:0016123: xanthophyll biosynthetic process | 4.13E-03 |
| 145 | GO:0009904: chloroplast accumulation movement | 4.13E-03 |
| 146 | GO:0010236: plastoquinone biosynthetic process | 4.13E-03 |
| 147 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.13E-03 |
| 148 | GO:0071423: malate transmembrane transport | 4.13E-03 |
| 149 | GO:0035434: copper ion transmembrane transport | 4.13E-03 |
| 150 | GO:0016117: carotenoid biosynthetic process | 4.71E-03 |
| 151 | GO:0031347: regulation of defense response | 4.83E-03 |
| 152 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 5.11E-03 |
| 153 | GO:0009959: negative gravitropism | 5.11E-03 |
| 154 | GO:0060918: auxin transport | 5.11E-03 |
| 155 | GO:0006555: methionine metabolic process | 5.11E-03 |
| 156 | GO:0033365: protein localization to organelle | 5.11E-03 |
| 157 | GO:0009117: nucleotide metabolic process | 5.11E-03 |
| 158 | GO:0009643: photosynthetic acclimation | 5.11E-03 |
| 159 | GO:1901371: regulation of leaf morphogenesis | 5.11E-03 |
| 160 | GO:0009228: thiamine biosynthetic process | 5.11E-03 |
| 161 | GO:0006301: postreplication repair | 5.11E-03 |
| 162 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.11E-03 |
| 163 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 5.11E-03 |
| 164 | GO:0006814: sodium ion transport | 5.91E-03 |
| 165 | GO:0010310: regulation of hydrogen peroxide metabolic process | 6.17E-03 |
| 166 | GO:0019509: L-methionine salvage from methylthioadenosine | 6.17E-03 |
| 167 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 6.17E-03 |
| 168 | GO:0010019: chloroplast-nucleus signaling pathway | 6.17E-03 |
| 169 | GO:0006508: proteolysis | 6.17E-03 |
| 170 | GO:0009791: post-embryonic development | 6.34E-03 |
| 171 | GO:0019252: starch biosynthetic process | 6.34E-03 |
| 172 | GO:1900056: negative regulation of leaf senescence | 7.30E-03 |
| 173 | GO:0006400: tRNA modification | 7.30E-03 |
| 174 | GO:0051510: regulation of unidimensional cell growth | 7.30E-03 |
| 175 | GO:0010038: response to metal ion | 7.30E-03 |
| 176 | GO:0015693: magnesium ion transport | 7.30E-03 |
| 177 | GO:0009396: folic acid-containing compound biosynthetic process | 7.30E-03 |
| 178 | GO:0006644: phospholipid metabolic process | 8.49E-03 |
| 179 | GO:0001522: pseudouridine synthesis | 8.49E-03 |
| 180 | GO:0006605: protein targeting | 8.49E-03 |
| 181 | GO:0005978: glycogen biosynthetic process | 8.49E-03 |
| 182 | GO:0009704: de-etiolation | 8.49E-03 |
| 183 | GO:0050821: protein stabilization | 8.49E-03 |
| 184 | GO:0000105: histidine biosynthetic process | 8.49E-03 |
| 185 | GO:0009231: riboflavin biosynthetic process | 8.49E-03 |
| 186 | GO:0006102: isocitrate metabolic process | 8.49E-03 |
| 187 | GO:0019430: removal of superoxide radicals | 9.75E-03 |
| 188 | GO:0022900: electron transport chain | 9.75E-03 |
| 189 | GO:0015996: chlorophyll catabolic process | 9.75E-03 |
| 190 | GO:0044030: regulation of DNA methylation | 9.75E-03 |
| 191 | GO:0016126: sterol biosynthetic process | 9.85E-03 |
| 192 | GO:0009821: alkaloid biosynthetic process | 1.11E-02 |
| 193 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.11E-02 |
| 194 | GO:0046916: cellular transition metal ion homeostasis | 1.11E-02 |
| 195 | GO:0006783: heme biosynthetic process | 1.11E-02 |
| 196 | GO:0048507: meristem development | 1.11E-02 |
| 197 | GO:0009058: biosynthetic process | 1.24E-02 |
| 198 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.25E-02 |
| 199 | GO:0035999: tetrahydrofolate interconversion | 1.25E-02 |
| 200 | GO:0009098: leucine biosynthetic process | 1.25E-02 |
| 201 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.25E-02 |
| 202 | GO:0006259: DNA metabolic process | 1.39E-02 |
| 203 | GO:0006535: cysteine biosynthetic process from serine | 1.39E-02 |
| 204 | GO:0000103: sulfate assimilation | 1.39E-02 |
| 205 | GO:0051555: flavonol biosynthetic process | 1.39E-02 |
| 206 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.39E-02 |
| 207 | GO:0009688: abscisic acid biosynthetic process | 1.39E-02 |
| 208 | GO:0045036: protein targeting to chloroplast | 1.39E-02 |
| 209 | GO:0009641: shade avoidance | 1.39E-02 |
| 210 | GO:0006811: ion transport | 1.42E-02 |
| 211 | GO:0010043: response to zinc ion | 1.49E-02 |
| 212 | GO:0007568: aging | 1.49E-02 |
| 213 | GO:0006265: DNA topological change | 1.54E-02 |
| 214 | GO:0043085: positive regulation of catalytic activity | 1.54E-02 |
| 215 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.54E-02 |
| 216 | GO:0009773: photosynthetic electron transport in photosystem I | 1.54E-02 |
| 217 | GO:0009682: induced systemic resistance | 1.54E-02 |
| 218 | GO:0008285: negative regulation of cell proliferation | 1.54E-02 |
| 219 | GO:0016485: protein processing | 1.54E-02 |
| 220 | GO:0048229: gametophyte development | 1.54E-02 |
| 221 | GO:0006790: sulfur compound metabolic process | 1.70E-02 |
| 222 | GO:0045037: protein import into chloroplast stroma | 1.70E-02 |
| 223 | GO:0007623: circadian rhythm | 1.75E-02 |
| 224 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.85E-02 |
| 225 | GO:0030048: actin filament-based movement | 1.86E-02 |
| 226 | GO:0006006: glucose metabolic process | 1.86E-02 |
| 227 | GO:0009785: blue light signaling pathway | 1.86E-02 |
| 228 | GO:0006807: nitrogen compound metabolic process | 1.86E-02 |
| 229 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.86E-02 |
| 230 | GO:0010075: regulation of meristem growth | 1.86E-02 |
| 231 | GO:0034605: cellular response to heat | 2.03E-02 |
| 232 | GO:0007015: actin filament organization | 2.03E-02 |
| 233 | GO:0010020: chloroplast fission | 2.03E-02 |
| 234 | GO:0019253: reductive pentose-phosphate cycle | 2.03E-02 |
| 235 | GO:0010114: response to red light | 2.12E-02 |
| 236 | GO:0019762: glucosinolate catabolic process | 2.38E-02 |
| 237 | GO:0000162: tryptophan biosynthetic process | 2.38E-02 |
| 238 | GO:0019344: cysteine biosynthetic process | 2.56E-02 |
| 239 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.56E-02 |
| 240 | GO:0042538: hyperosmotic salinity response | 2.66E-02 |
| 241 | GO:0051302: regulation of cell division | 2.74E-02 |
| 242 | GO:0008299: isoprenoid biosynthetic process | 2.74E-02 |
| 243 | GO:0006418: tRNA aminoacylation for protein translation | 2.74E-02 |
| 244 | GO:0007017: microtubule-based process | 2.74E-02 |
| 245 | GO:0010073: meristem maintenance | 2.74E-02 |
| 246 | GO:0006825: copper ion transport | 2.74E-02 |
| 247 | GO:0051321: meiotic cell cycle | 2.94E-02 |
| 248 | GO:0006366: transcription from RNA polymerase II promoter | 2.94E-02 |
| 249 | GO:0016114: terpenoid biosynthetic process | 2.94E-02 |
| 250 | GO:0006730: one-carbon metabolic process | 3.13E-02 |
| 251 | GO:0006417: regulation of translation | 3.16E-02 |
| 252 | GO:0009693: ethylene biosynthetic process | 3.33E-02 |
| 253 | GO:0010227: floral organ abscission | 3.33E-02 |
| 254 | GO:0006817: phosphate ion transport | 3.54E-02 |
| 255 | GO:0070417: cellular response to cold | 3.74E-02 |
| 256 | GO:0042335: cuticle development | 3.96E-02 |
| 257 | GO:0009735: response to cytokinin | 4.01E-02 |
| 258 | GO:0006520: cellular amino acid metabolic process | 4.17E-02 |
| 259 | GO:0006662: glycerol ether metabolic process | 4.17E-02 |
| 260 | GO:0046777: protein autophosphorylation | 4.29E-02 |
| 261 | GO:0007059: chromosome segregation | 4.39E-02 |
| 262 | GO:0009646: response to absence of light | 4.39E-02 |
| 263 | GO:0042752: regulation of circadian rhythm | 4.39E-02 |
| 264 | GO:0009851: auxin biosynthetic process | 4.62E-02 |
| 265 | GO:0009414: response to water deprivation | 4.81E-02 |
| 266 | GO:0000302: response to reactive oxygen species | 4.85E-02 |
| 267 | GO:0002229: defense response to oomycetes | 4.85E-02 |
| 268 | GO:0010193: response to ozone | 4.85E-02 |