GO Enrichment Analysis of Co-expressed Genes with
AT5G16250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 2 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 3.44E-14 |
| 7 | GO:0010027: thylakoid membrane organization | 2.15E-09 |
| 8 | GO:0018298: protein-chromophore linkage | 4.57E-09 |
| 9 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.28E-08 |
| 10 | GO:0010196: nonphotochemical quenching | 4.50E-08 |
| 11 | GO:0010206: photosystem II repair | 1.49E-07 |
| 12 | GO:0090391: granum assembly | 4.55E-07 |
| 13 | GO:0042549: photosystem II stabilization | 5.63E-06 |
| 14 | GO:0009645: response to low light intensity stimulus | 1.13E-05 |
| 15 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.13E-05 |
| 16 | GO:0010218: response to far red light | 2.42E-05 |
| 17 | GO:0010205: photoinhibition | 3.03E-05 |
| 18 | GO:0065002: intracellular protein transmembrane transport | 4.31E-05 |
| 19 | GO:0043007: maintenance of rDNA | 4.31E-05 |
| 20 | GO:0043953: protein transport by the Tat complex | 4.31E-05 |
| 21 | GO:0010114: response to red light | 4.53E-05 |
| 22 | GO:0009644: response to high light intensity | 5.11E-05 |
| 23 | GO:0010207: photosystem II assembly | 6.90E-05 |
| 24 | GO:0035304: regulation of protein dephosphorylation | 1.07E-04 |
| 25 | GO:0009629: response to gravity | 1.07E-04 |
| 26 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.07E-04 |
| 27 | GO:0009269: response to desiccation | 1.24E-04 |
| 28 | GO:0071492: cellular response to UV-A | 1.84E-04 |
| 29 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.70E-04 |
| 30 | GO:0006020: inositol metabolic process | 2.70E-04 |
| 31 | GO:0071484: cellular response to light intensity | 2.70E-04 |
| 32 | GO:0030104: water homeostasis | 3.64E-04 |
| 33 | GO:0006021: inositol biosynthetic process | 3.64E-04 |
| 34 | GO:0071486: cellular response to high light intensity | 3.64E-04 |
| 35 | GO:0009765: photosynthesis, light harvesting | 3.64E-04 |
| 36 | GO:0010236: plastoquinone biosynthetic process | 4.63E-04 |
| 37 | GO:0016311: dephosphorylation | 4.74E-04 |
| 38 | GO:0009813: flavonoid biosynthetic process | 5.22E-04 |
| 39 | GO:0046855: inositol phosphate dephosphorylation | 5.67E-04 |
| 40 | GO:0009637: response to blue light | 6.25E-04 |
| 41 | GO:0010189: vitamin E biosynthetic process | 6.76E-04 |
| 42 | GO:1900057: positive regulation of leaf senescence | 7.90E-04 |
| 43 | GO:0071446: cellular response to salicylic acid stimulus | 7.90E-04 |
| 44 | GO:0030091: protein repair | 9.08E-04 |
| 45 | GO:0031540: regulation of anthocyanin biosynthetic process | 9.08E-04 |
| 46 | GO:0009231: riboflavin biosynthetic process | 9.08E-04 |
| 47 | GO:0006875: cellular metal ion homeostasis | 9.08E-04 |
| 48 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 1.03E-03 |
| 49 | GO:0090333: regulation of stomatal closure | 1.16E-03 |
| 50 | GO:0019684: photosynthesis, light reaction | 1.57E-03 |
| 51 | GO:0009773: photosynthetic electron transport in photosystem I | 1.57E-03 |
| 52 | GO:0006790: sulfur compound metabolic process | 1.72E-03 |
| 53 | GO:0005983: starch catabolic process | 1.72E-03 |
| 54 | GO:0045037: protein import into chloroplast stroma | 1.72E-03 |
| 55 | GO:0009416: response to light stimulus | 1.97E-03 |
| 56 | GO:0046854: phosphatidylinositol phosphorylation | 2.19E-03 |
| 57 | GO:0048278: vesicle docking | 2.88E-03 |
| 58 | GO:0071215: cellular response to abscisic acid stimulus | 3.24E-03 |
| 59 | GO:0009561: megagametogenesis | 3.43E-03 |
| 60 | GO:0009658: chloroplast organization | 3.88E-03 |
| 61 | GO:0061025: membrane fusion | 4.23E-03 |
| 62 | GO:0071554: cell wall organization or biogenesis | 4.64E-03 |
| 63 | GO:0010583: response to cyclopentenone | 4.86E-03 |
| 64 | GO:0009567: double fertilization forming a zygote and endosperm | 5.30E-03 |
| 65 | GO:0006906: vesicle fusion | 6.45E-03 |
| 66 | GO:0006281: DNA repair | 7.08E-03 |
| 67 | GO:0009867: jasmonic acid mediated signaling pathway | 8.47E-03 |
| 68 | GO:0006887: exocytosis | 9.56E-03 |
| 69 | GO:0006631: fatty acid metabolic process | 9.56E-03 |
| 70 | GO:0009926: auxin polar transport | 1.01E-02 |
| 71 | GO:0009735: response to cytokinin | 1.15E-02 |
| 72 | GO:0031347: regulation of defense response | 1.16E-02 |
| 73 | GO:0006364: rRNA processing | 1.25E-02 |
| 74 | GO:0010224: response to UV-B | 1.28E-02 |
| 75 | GO:0009611: response to wounding | 1.29E-02 |
| 76 | GO:0009790: embryo development | 2.10E-02 |
| 77 | GO:0006979: response to oxidative stress | 2.58E-02 |
| 78 | GO:0006470: protein dephosphorylation | 2.60E-02 |
| 79 | GO:0009733: response to auxin | 2.87E-02 |
| 80 | GO:0042254: ribosome biogenesis | 3.27E-02 |
| 81 | GO:0009409: response to cold | 3.46E-02 |
| 82 | GO:0007049: cell cycle | 3.49E-02 |
| 83 | GO:0080167: response to karrikin | 3.76E-02 |
| 84 | GO:0006412: translation | 3.84E-02 |
| 85 | GO:0045454: cell redox homeostasis | 4.27E-02 |
| 86 | GO:0006886: intracellular protein transport | 4.37E-02 |
| 87 | GO:0032259: methylation | 4.81E-02 |
| 88 | GO:0016042: lipid catabolic process | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 2 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 3 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
| 4 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 5 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 7 | GO:0016168: chlorophyll binding | 2.52E-09 |
| 8 | GO:0031409: pigment binding | 7.80E-09 |
| 9 | GO:0019203: carbohydrate phosphatase activity | 4.31E-05 |
| 10 | GO:0015088: copper uptake transmembrane transporter activity | 4.31E-05 |
| 11 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 4.31E-05 |
| 12 | GO:0050308: sugar-phosphatase activity | 4.31E-05 |
| 13 | GO:0010242: oxygen evolving activity | 4.31E-05 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 4.31E-05 |
| 15 | GO:0031072: heat shock protein binding | 5.98E-05 |
| 16 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.07E-04 |
| 17 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.07E-04 |
| 18 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.07E-04 |
| 19 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.07E-04 |
| 20 | GO:0019843: rRNA binding | 1.66E-04 |
| 21 | GO:0005504: fatty acid binding | 1.84E-04 |
| 22 | GO:0004751: ribose-5-phosphate isomerase activity | 1.84E-04 |
| 23 | GO:0003913: DNA photolyase activity | 1.84E-04 |
| 24 | GO:0045430: chalcone isomerase activity | 3.64E-04 |
| 25 | GO:2001070: starch binding | 5.67E-04 |
| 26 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 6.76E-04 |
| 27 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 6.76E-04 |
| 28 | GO:0009881: photoreceptor activity | 7.90E-04 |
| 29 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.16E-03 |
| 30 | GO:0005381: iron ion transmembrane transporter activity | 1.29E-03 |
| 31 | GO:0046872: metal ion binding | 1.30E-03 |
| 32 | GO:0051082: unfolded protein binding | 1.48E-03 |
| 33 | GO:0008266: poly(U) RNA binding | 2.03E-03 |
| 34 | GO:0042802: identical protein binding | 3.20E-03 |
| 35 | GO:0022891: substrate-specific transmembrane transporter activity | 3.24E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 3.43E-03 |
| 37 | GO:0016413: O-acetyltransferase activity | 5.75E-03 |
| 38 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 6.94E-03 |
| 39 | GO:0030145: manganese ion binding | 7.95E-03 |
| 40 | GO:0003993: acid phosphatase activity | 8.74E-03 |
| 41 | GO:0000149: SNARE binding | 9.01E-03 |
| 42 | GO:0005484: SNAP receptor activity | 1.01E-02 |
| 43 | GO:0003735: structural constituent of ribosome | 1.15E-02 |
| 44 | GO:0005509: calcium ion binding | 2.36E-02 |
| 45 | GO:0008168: methyltransferase activity | 3.14E-02 |
| 46 | GO:0000287: magnesium ion binding | 3.18E-02 |
| 47 | GO:0016788: hydrolase activity, acting on ester bonds | 3.27E-02 |
| 48 | GO:0052689: carboxylic ester hydrolase activity | 4.03E-02 |
| 49 | GO:0042803: protein homodimerization activity | 4.41E-02 |
| 50 | GO:0003924: GTPase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
| 3 | GO:0043235: receptor complex | 0.00E+00 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.08E-25 |
| 5 | GO:0009534: chloroplast thylakoid | 2.79E-20 |
| 6 | GO:0009507: chloroplast | 4.72E-20 |
| 7 | GO:0009579: thylakoid | 1.48E-18 |
| 8 | GO:0010287: plastoglobule | 5.26E-11 |
| 9 | GO:0009523: photosystem II | 6.10E-10 |
| 10 | GO:0009941: chloroplast envelope | 6.22E-10 |
| 11 | GO:0030095: chloroplast photosystem II | 4.50E-09 |
| 12 | GO:0009522: photosystem I | 6.23E-08 |
| 13 | GO:0009538: photosystem I reaction center | 7.00E-08 |
| 14 | GO:0009570: chloroplast stroma | 5.97E-07 |
| 15 | GO:0009517: PSII associated light-harvesting complex II | 2.14E-06 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 7.73E-06 |
| 17 | GO:0031977: thylakoid lumen | 3.99E-05 |
| 18 | GO:0031361: integral component of thylakoid membrane | 4.31E-05 |
| 19 | GO:0009783: photosystem II antenna complex | 4.31E-05 |
| 20 | GO:0030076: light-harvesting complex | 7.88E-05 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 1.12E-04 |
| 22 | GO:0016021: integral component of membrane | 1.19E-04 |
| 23 | GO:0009706: chloroplast inner membrane | 1.20E-04 |
| 24 | GO:0033281: TAT protein transport complex | 1.84E-04 |
| 25 | GO:0019898: extrinsic component of membrane | 2.46E-04 |
| 26 | GO:0031897: Tic complex | 3.64E-04 |
| 27 | GO:0009533: chloroplast stromal thylakoid | 7.90E-04 |
| 28 | GO:0008180: COP9 signalosome | 1.16E-03 |
| 29 | GO:0009504: cell plate | 4.43E-03 |
| 30 | GO:0005840: ribosome | 5.09E-03 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 7.19E-03 |
| 32 | GO:0015934: large ribosomal subunit | 7.95E-03 |
| 33 | GO:0031201: SNARE complex | 9.56E-03 |
| 34 | GO:0000502: proteasome complex | 1.25E-02 |
| 35 | GO:0012505: endomembrane system | 1.57E-02 |
| 36 | GO:0009524: phragmoplast | 1.95E-02 |
| 37 | GO:0031225: anchored component of membrane | 1.97E-02 |
| 38 | GO:0009705: plant-type vacuole membrane | 2.36E-02 |
| 39 | GO:0016020: membrane | 2.38E-02 |
| 40 | GO:0046658: anchored component of plasma membrane | 2.88E-02 |
| 41 | GO:0009536: plastid | 3.13E-02 |