co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G15490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
2	GO:1902001: fatty acid transmembrane transport	0.00E+00
3	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
4	GO:0018063: cytochrome c-heme linkage	0.00E+00
5	GO:0006005: L-fucose biosynthetic process	0.00E+00
6	GO:0006605: protein targeting	1.29E-05
7	GO:0009699: phenylpropanoid biosynthetic process	1.66E-05
8	GO:0042350: GDP-L-fucose biosynthetic process	3.90E-05
9	GO:0080173: male-female gamete recognition during double fertilization	3.90E-05
10	GO:0015865: purine nucleotide transport	9.72E-05
11	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	9.72E-05
12	GO:0071668: plant-type cell wall assembly	9.72E-05
13	GO:0055088: lipid homeostasis	9.72E-05
14	GO:0019521: D-gluconate metabolic process	9.72E-05
15	GO:0010372: positive regulation of gibberellin biosynthetic process	9.72E-05
16	GO:0015908: fatty acid transport	9.72E-05
17	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.68E-04
18	GO:0006065: UDP-glucuronate biosynthetic process	1.68E-04
19	GO:0052546: cell wall pectin metabolic process	1.68E-04
20	GO:0006556: S-adenosylmethionine biosynthetic process	1.68E-04
21	GO:0032502: developmental process	2.48E-04
22	GO:0046902: regulation of mitochondrial membrane permeability	2.48E-04
23	GO:0010971: positive regulation of G2/M transition of mitotic cell cycle	2.48E-04
24	GO:0033356: UDP-L-arabinose metabolic process	3.33E-04
25	GO:0033365: protein localization to organelle	5.22E-04
26	GO:0009423: chorismate biosynthetic process	6.22E-04
27	GO:0006744: ubiquinone biosynthetic process	7.28E-04
28	GO:0000338: protein deneddylation	7.28E-04
29	GO:0071669: plant-type cell wall organization or biogenesis	7.28E-04
30	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.37E-04
31	GO:0006402: mRNA catabolic process	8.37E-04
32	GO:0010100: negative regulation of photomorphogenesis	9.50E-04
33	GO:0017004: cytochrome complex assembly	9.50E-04
34	GO:0009808: lignin metabolic process	9.50E-04
35	GO:0010208: pollen wall assembly	9.50E-04
36	GO:0007338: single fertilization	1.07E-03
37	GO:0006098: pentose-phosphate shunt	1.07E-03
38	GO:0008202: steroid metabolic process	1.19E-03
39	GO:0006810: transport	1.26E-03
40	GO:0006032: chitin catabolic process	1.31E-03
41	GO:0010215: cellulose microfibril organization	1.31E-03
42	GO:0009073: aromatic amino acid family biosynthetic process	1.44E-03
43	GO:0009698: phenylpropanoid metabolic process	1.44E-03
44	GO:0006913: nucleocytoplasmic transport	1.44E-03
45	GO:0015706: nitrate transport	1.58E-03
46	GO:0000266: mitochondrial fission	1.58E-03
47	GO:0034605: cellular response to heat	1.86E-03
48	GO:0002237: response to molecule of bacterial origin	1.86E-03
49	GO:0010167: response to nitrate	2.01E-03
50	GO:0080147: root hair cell development	2.32E-03
51	GO:0000027: ribosomal large subunit assembly	2.32E-03
52	GO:0016998: cell wall macromolecule catabolic process	2.64E-03
53	GO:0006730: one-carbon metabolic process	2.80E-03
54	GO:0040007: growth	2.97E-03
55	GO:0009306: protein secretion	3.15E-03
56	GO:0009741: response to brassinosteroid	3.69E-03
57	GO:0031047: gene silencing by RNA	4.45E-03
58	GO:0009567: double fertilization forming a zygote and endosperm	4.85E-03
59	GO:0016579: protein deubiquitination	5.26E-03
60	GO:0001666: response to hypoxia	5.47E-03
61	GO:0009911: positive regulation of flower development	5.47E-03
62	GO:0042128: nitrate assimilation	5.91E-03
63	GO:0048573: photoperiodism, flowering	6.13E-03
64	GO:0016049: cell growth	6.35E-03
65	GO:0030244: cellulose biosynthetic process	6.58E-03
66	GO:0009832: plant-type cell wall biogenesis	6.80E-03
67	GO:0006099: tricarboxylic acid cycle	7.99E-03
68	GO:0006839: mitochondrial transport	8.48E-03
69	GO:0009640: photomorphogenesis	9.25E-03
70	GO:0009555: pollen development	1.11E-02
71	GO:0009611: response to wounding	1.13E-02
72	GO:0009809: lignin biosynthetic process	1.14E-02
73	GO:0009585: red, far-red light phototransduction	1.14E-02
74	GO:0010224: response to UV-B	1.17E-02
75	GO:0009909: regulation of flower development	1.23E-02
76	GO:0009626: plant-type hypersensitive response	1.34E-02
77	GO:0009620: response to fungus	1.37E-02
78	GO:0055085: transmembrane transport	1.41E-02
79	GO:0042545: cell wall modification	1.43E-02
80	GO:0055114: oxidation-reduction process	1.61E-02
81	GO:0009651: response to salt stress	1.89E-02
82	GO:0016036: cellular response to phosphate starvation	2.05E-02
83	GO:0045490: pectin catabolic process	2.16E-02
84	GO:0010228: vegetative to reproductive phase transition of meristem	2.23E-02
85	GO:0009860: pollen tube growth	3.10E-02
86	GO:0005975: carbohydrate metabolic process	3.41E-02
87	GO:0080167: response to karrikin	3.43E-02
88	GO:0046686: response to cadmium ion	3.50E-02
89	GO:0010200: response to chitin	3.51E-02
90	GO:0046777: protein autophosphorylation	3.60E-02
91	GO:0045892: negative regulation of transcription, DNA-templated	3.94E-02
92	GO:0006886: intracellular protein transport	3.99E-02
93	GO:0006869: lipid transport	4.16E-02
94	GO:0016042: lipid catabolic process	4.43E-02
95	GO:0009408: response to heat	4.53E-02
96	GO:0006397: mRNA processing	4.66E-02
97	GO:0008152: metabolic process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0016710: trans-cinnamate 4-monooxygenase activity	0.00E+00
2	GO:0004107: chorismate synthase activity	0.00E+00
3	GO:0015245: fatty acid transporter activity	3.90E-05
4	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.90E-05
5	GO:0090353: polygalacturonase inhibitor activity	3.90E-05
6	GO:0050577: GDP-L-fucose synthase activity	3.90E-05
7	GO:0019784: NEDD8-specific protease activity	3.90E-05
8	GO:0032934: sterol binding	9.72E-05
9	GO:0052691: UDP-arabinopyranose mutase activity	9.72E-05
10	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.68E-04
11	GO:0004478: methionine adenosyltransferase activity	1.68E-04
12	GO:0016866: intramolecular transferase activity	3.33E-04
13	GO:0005471: ATP:ADP antiporter activity	4.25E-04
14	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.22E-04
15	GO:0004656: procollagen-proline 4-dioxygenase activity	6.22E-04
16	GO:0004012: phospholipid-translocating ATPase activity	6.22E-04
17	GO:0008142: oxysterol binding	9.50E-04
18	GO:0005515: protein binding	9.57E-04
19	GO:0016207: 4-coumarate-CoA ligase activity	1.07E-03
20	GO:0015112: nitrate transmembrane transporter activity	1.19E-03
21	GO:0003729: mRNA binding	1.28E-03
22	GO:0004568: chitinase activity	1.31E-03
23	GO:0004022: alcohol dehydrogenase (NAD) activity	1.72E-03
24	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.72E-03
25	GO:0031418: L-ascorbic acid binding	2.32E-03
26	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.64E-03
27	GO:0042802: identical protein binding	2.82E-03
28	GO:0016760: cellulose synthase (UDP-forming) activity	2.97E-03
29	GO:0050662: coenzyme binding	3.87E-03
30	GO:0016853: isomerase activity	3.87E-03
31	GO:0010181: FMN binding	3.87E-03
32	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.26E-03
33	GO:0004518: nuclease activity	4.45E-03
34	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.58E-03
35	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.75E-03
36	GO:0005198: structural molecule activity	1.00E-02
37	GO:0051287: NAD binding	1.06E-02
38	GO:0016298: lipase activity	1.17E-02
39	GO:0045330: aspartyl esterase activity	1.23E-02
40	GO:0016874: ligase activity	1.40E-02
41	GO:0030599: pectinesterase activity	1.40E-02
42	GO:0016746: transferase activity, transferring acyl groups	1.49E-02
43	GO:0008026: ATP-dependent helicase activity	1.52E-02
44	GO:0005507: copper ion binding	1.58E-02
45	GO:0046910: pectinesterase inhibitor activity	2.05E-02
46	GO:0005506: iron ion binding	2.21E-02
47	GO:0000287: magnesium ion binding	2.90E-02
48	GO:0020037: heme binding	3.54E-02
49	GO:0052689: carboxylic ester hydrolase activity	3.68E-02
50	GO:0005524: ATP binding	4.49E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000138: Golgi trans cisterna	3.90E-05
3	GO:0045252: oxoglutarate dehydrogenase complex	3.90E-05
4	GO:0016442: RISC complex	3.90E-05
5	GO:0005743: mitochondrial inner membrane	7.52E-04
6	GO:0005783: endoplasmic reticulum	8.96E-04
7	GO:0005774: vacuolar membrane	1.03E-03
8	GO:0008180: COP9 signalosome	1.07E-03
9	GO:0010494: cytoplasmic stress granule	1.07E-03
10	GO:0005829: cytosol	1.10E-03
11	GO:0005618: cell wall	1.30E-03
12	GO:0005740: mitochondrial envelope	1.31E-03
13	GO:0005789: endoplasmic reticulum membrane	1.33E-03
14	GO:0048471: perinuclear region of cytoplasm	1.44E-03
15	GO:0005795: Golgi stack	2.01E-03
16	GO:0043234: protein complex	2.16E-03
17	GO:0005741: mitochondrial outer membrane	2.64E-03
18	GO:0005886: plasma membrane	3.20E-03
19	GO:0071944: cell periphery	4.65E-03
20	GO:0009505: plant-type cell wall	5.41E-03
21	GO:0000932: P-body	5.47E-03
22	GO:0005794: Golgi apparatus	5.71E-03
23	GO:0031902: late endosome membrane	8.74E-03
24	GO:0016021: integral component of membrane	9.74E-03
25	GO:0022626: cytosolic ribosome	1.06E-02
26	GO:0009506: plasmodesma	1.07E-02
27	GO:0005635: nuclear envelope	1.20E-02
28	GO:0005777: peroxisome	1.27E-02
29	GO:0010008: endosome membrane	1.31E-02
30	GO:0009706: chloroplast inner membrane	1.46E-02
31	GO:0005623: cell	1.75E-02
32	GO:0005802: trans-Golgi network	1.78E-02
33	GO:0005622: intracellular	1.97E-02
34	GO:0005768: endosome	2.02E-02
35	GO:0009536: plastid	2.76E-02
36	GO:0000139: Golgi membrane	3.04E-02
37	GO:0022625: cytosolic large ribosomal subunit	3.56E-02
38	GO:0005730: nucleolus	3.80E-02
39	GO:0016020: membrane	4.53E-02