GO Enrichment Analysis of Co-expressed Genes with
AT5G14970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 6 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 7 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 8 | GO:0006021: inositol biosynthetic process | 4.54E-05 |
| 9 | GO:0046855: inositol phosphate dephosphorylation | 1.05E-04 |
| 10 | GO:0015979: photosynthesis | 1.42E-04 |
| 11 | GO:0009793: embryo development ending in seed dormancy | 2.16E-04 |
| 12 | GO:0048564: photosystem I assembly | 2.41E-04 |
| 13 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.57E-04 |
| 14 | GO:0006475: internal protein amino acid acetylation | 2.57E-04 |
| 15 | GO:1904964: positive regulation of phytol biosynthetic process | 2.57E-04 |
| 16 | GO:0006474: N-terminal protein amino acid acetylation | 2.57E-04 |
| 17 | GO:0017198: N-terminal peptidyl-serine acetylation | 2.57E-04 |
| 18 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.57E-04 |
| 19 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.57E-04 |
| 20 | GO:0006419: alanyl-tRNA aminoacylation | 2.57E-04 |
| 21 | GO:0019646: aerobic electron transport chain | 2.57E-04 |
| 22 | GO:0033388: putrescine biosynthetic process from arginine | 2.57E-04 |
| 23 | GO:0000476: maturation of 4.5S rRNA | 2.57E-04 |
| 24 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.57E-04 |
| 25 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 2.57E-04 |
| 26 | GO:0000967: rRNA 5'-end processing | 2.57E-04 |
| 27 | GO:0071482: cellular response to light stimulus | 2.98E-04 |
| 28 | GO:0009657: plastid organization | 2.98E-04 |
| 29 | GO:0000256: allantoin catabolic process | 5.68E-04 |
| 30 | GO:0009446: putrescine biosynthetic process | 5.68E-04 |
| 31 | GO:0034470: ncRNA processing | 5.68E-04 |
| 32 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 5.68E-04 |
| 33 | GO:0006695: cholesterol biosynthetic process | 5.68E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.68E-04 |
| 35 | GO:0006435: threonyl-tRNA aminoacylation | 5.68E-04 |
| 36 | GO:0006741: NADP biosynthetic process | 5.68E-04 |
| 37 | GO:0080005: photosystem stoichiometry adjustment | 5.68E-04 |
| 38 | GO:0006790: sulfur compound metabolic process | 6.59E-04 |
| 39 | GO:0010207: photosystem II assembly | 8.40E-04 |
| 40 | GO:0006954: inflammatory response | 9.22E-04 |
| 41 | GO:0010136: ureide catabolic process | 9.22E-04 |
| 42 | GO:0051604: protein maturation | 9.22E-04 |
| 43 | GO:0005977: glycogen metabolic process | 9.22E-04 |
| 44 | GO:0019674: NAD metabolic process | 9.22E-04 |
| 45 | GO:0019853: L-ascorbic acid biosynthetic process | 9.38E-04 |
| 46 | GO:0046854: phosphatidylinositol phosphorylation | 9.38E-04 |
| 47 | GO:2001141: regulation of RNA biosynthetic process | 1.32E-03 |
| 48 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.32E-03 |
| 49 | GO:0019363: pyridine nucleotide biosynthetic process | 1.32E-03 |
| 50 | GO:0006020: inositol metabolic process | 1.32E-03 |
| 51 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.32E-03 |
| 52 | GO:0006145: purine nucleobase catabolic process | 1.32E-03 |
| 53 | GO:0051016: barbed-end actin filament capping | 1.32E-03 |
| 54 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.32E-03 |
| 55 | GO:0010021: amylopectin biosynthetic process | 1.76E-03 |
| 56 | GO:0009765: photosynthesis, light harvesting | 1.76E-03 |
| 57 | GO:0015846: polyamine transport | 1.76E-03 |
| 58 | GO:0006364: rRNA processing | 1.78E-03 |
| 59 | GO:0016558: protein import into peroxisome matrix | 2.25E-03 |
| 60 | GO:0006564: L-serine biosynthetic process | 2.25E-03 |
| 61 | GO:0016123: xanthophyll biosynthetic process | 2.25E-03 |
| 62 | GO:0016120: carotene biosynthetic process | 2.25E-03 |
| 63 | GO:0010190: cytochrome b6f complex assembly | 2.77E-03 |
| 64 | GO:0042549: photosystem II stabilization | 2.77E-03 |
| 65 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.77E-03 |
| 66 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.77E-03 |
| 67 | GO:0010189: vitamin E biosynthetic process | 3.33E-03 |
| 68 | GO:1901259: chloroplast rRNA processing | 3.33E-03 |
| 69 | GO:0042372: phylloquinone biosynthetic process | 3.33E-03 |
| 70 | GO:0009645: response to low light intensity stimulus | 3.93E-03 |
| 71 | GO:0006400: tRNA modification | 3.93E-03 |
| 72 | GO:0010027: thylakoid membrane organization | 4.03E-03 |
| 73 | GO:0055114: oxidation-reduction process | 4.49E-03 |
| 74 | GO:0006605: protein targeting | 4.56E-03 |
| 75 | GO:0016559: peroxisome fission | 4.56E-03 |
| 76 | GO:0030091: protein repair | 4.56E-03 |
| 77 | GO:0016311: dephosphorylation | 4.99E-03 |
| 78 | GO:0017004: cytochrome complex assembly | 5.22E-03 |
| 79 | GO:0018298: protein-chromophore linkage | 5.25E-03 |
| 80 | GO:0033384: geranyl diphosphate biosynthetic process | 5.92E-03 |
| 81 | GO:0006098: pentose-phosphate shunt | 5.92E-03 |
| 82 | GO:0045337: farnesyl diphosphate biosynthetic process | 5.92E-03 |
| 83 | GO:0007568: aging | 6.07E-03 |
| 84 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.19E-03 |
| 85 | GO:1903507: negative regulation of nucleic acid-templated transcription | 8.19E-03 |
| 86 | GO:0006352: DNA-templated transcription, initiation | 8.19E-03 |
| 87 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.19E-03 |
| 88 | GO:0009773: photosynthetic electron transport in photosystem I | 8.19E-03 |
| 89 | GO:0006415: translational termination | 8.19E-03 |
| 90 | GO:0019684: photosynthesis, light reaction | 8.19E-03 |
| 91 | GO:0010114: response to red light | 8.59E-03 |
| 92 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.00E-03 |
| 93 | GO:0010628: positive regulation of gene expression | 9.85E-03 |
| 94 | GO:0006094: gluconeogenesis | 9.85E-03 |
| 95 | GO:2000012: regulation of auxin polar transport | 9.85E-03 |
| 96 | GO:0006807: nitrogen compound metabolic process | 9.85E-03 |
| 97 | GO:0042254: ribosome biogenesis | 9.98E-03 |
| 98 | GO:0010020: chloroplast fission | 1.07E-02 |
| 99 | GO:0010030: positive regulation of seed germination | 1.16E-02 |
| 100 | GO:0010224: response to UV-B | 1.20E-02 |
| 101 | GO:0006863: purine nucleobase transport | 1.25E-02 |
| 102 | GO:0006833: water transport | 1.25E-02 |
| 103 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.45E-02 |
| 104 | GO:0019953: sexual reproduction | 1.45E-02 |
| 105 | GO:0008299: isoprenoid biosynthetic process | 1.45E-02 |
| 106 | GO:0006418: tRNA aminoacylation for protein translation | 1.45E-02 |
| 107 | GO:0007017: microtubule-based process | 1.45E-02 |
| 108 | GO:0048511: rhythmic process | 1.55E-02 |
| 109 | GO:0019915: lipid storage | 1.55E-02 |
| 110 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.65E-02 |
| 111 | GO:0006396: RNA processing | 1.70E-02 |
| 112 | GO:0006012: galactose metabolic process | 1.76E-02 |
| 113 | GO:0006457: protein folding | 1.79E-02 |
| 114 | GO:0009306: protein secretion | 1.86E-02 |
| 115 | GO:0016117: carotenoid biosynthetic process | 1.97E-02 |
| 116 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.97E-02 |
| 117 | GO:0034220: ion transmembrane transport | 2.09E-02 |
| 118 | GO:0000413: protein peptidyl-prolyl isomerization | 2.09E-02 |
| 119 | GO:0042631: cellular response to water deprivation | 2.09E-02 |
| 120 | GO:0048868: pollen tube development | 2.20E-02 |
| 121 | GO:0042752: regulation of circadian rhythm | 2.32E-02 |
| 122 | GO:0019252: starch biosynthetic process | 2.43E-02 |
| 123 | GO:0008654: phospholipid biosynthetic process | 2.43E-02 |
| 124 | GO:0006635: fatty acid beta-oxidation | 2.56E-02 |
| 125 | GO:0002229: defense response to oomycetes | 2.56E-02 |
| 126 | GO:0010193: response to ozone | 2.56E-02 |
| 127 | GO:0006413: translational initiation | 2.67E-02 |
| 128 | GO:0016032: viral process | 2.68E-02 |
| 129 | GO:0006464: cellular protein modification process | 2.93E-02 |
| 130 | GO:0009451: RNA modification | 2.93E-02 |
| 131 | GO:0007166: cell surface receptor signaling pathway | 3.27E-02 |
| 132 | GO:0001666: response to hypoxia | 3.32E-02 |
| 133 | GO:0042128: nitrate assimilation | 3.59E-02 |
| 134 | GO:0009817: defense response to fungus, incompatible interaction | 4.01E-02 |
| 135 | GO:0048481: plant ovule development | 4.01E-02 |
| 136 | GO:0009658: chloroplast organization | 4.42E-02 |
| 137 | GO:0009637: response to blue light | 4.75E-02 |
| 138 | GO:0009853: photorespiration | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019808: polyamine binding | 0.00E+00 |
| 2 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 3 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 7 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 8 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 9 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 10 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 11 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 12 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 13 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 14 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 15 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.07E-06 |
| 16 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.07E-06 |
| 17 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.07E-06 |
| 18 | GO:0070402: NADPH binding | 1.11E-05 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.70E-05 |
| 20 | GO:0004462: lactoylglutathione lyase activity | 1.05E-04 |
| 21 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.45E-04 |
| 22 | GO:0004033: aldo-keto reductase (NADP) activity | 2.41E-04 |
| 23 | GO:0004830: tryptophan-tRNA ligase activity | 2.57E-04 |
| 24 | GO:0042736: NADH kinase activity | 2.57E-04 |
| 25 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.57E-04 |
| 26 | GO:0004719: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | 2.57E-04 |
| 27 | GO:1990189: peptide-serine-N-acetyltransferase activity | 2.57E-04 |
| 28 | GO:0004813: alanine-tRNA ligase activity | 2.57E-04 |
| 29 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 2.57E-04 |
| 30 | GO:0004829: threonine-tRNA ligase activity | 5.68E-04 |
| 31 | GO:0019172: glyoxalase III activity | 5.68E-04 |
| 32 | GO:0019156: isoamylase activity | 5.68E-04 |
| 33 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.68E-04 |
| 34 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.68E-04 |
| 35 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 9.22E-04 |
| 36 | GO:0004751: ribose-5-phosphate isomerase activity | 9.22E-04 |
| 37 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.22E-04 |
| 38 | GO:0005528: FK506 binding | 1.15E-03 |
| 39 | GO:0016149: translation release factor activity, codon specific | 1.32E-03 |
| 40 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.76E-03 |
| 41 | GO:0001053: plastid sigma factor activity | 1.76E-03 |
| 42 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.76E-03 |
| 43 | GO:0008453: alanine-glyoxylate transaminase activity | 1.76E-03 |
| 44 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.76E-03 |
| 45 | GO:0016987: sigma factor activity | 1.76E-03 |
| 46 | GO:0043495: protein anchor | 1.76E-03 |
| 47 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.76E-03 |
| 48 | GO:0004556: alpha-amylase activity | 2.77E-03 |
| 49 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.77E-03 |
| 50 | GO:0004332: fructose-bisphosphate aldolase activity | 2.77E-03 |
| 51 | GO:0042578: phosphoric ester hydrolase activity | 2.77E-03 |
| 52 | GO:0008195: phosphatidate phosphatase activity | 3.33E-03 |
| 53 | GO:0016597: amino acid binding | 3.80E-03 |
| 54 | GO:0019899: enzyme binding | 3.93E-03 |
| 55 | GO:0016168: chlorophyll binding | 4.26E-03 |
| 56 | GO:0043022: ribosome binding | 4.56E-03 |
| 57 | GO:0003951: NAD+ kinase activity | 5.22E-03 |
| 58 | GO:0016491: oxidoreductase activity | 5.74E-03 |
| 59 | GO:0003747: translation release factor activity | 5.92E-03 |
| 60 | GO:0004337: geranyltranstransferase activity | 5.92E-03 |
| 61 | GO:0003993: acid phosphatase activity | 6.96E-03 |
| 62 | GO:0004161: dimethylallyltranstransferase activity | 8.19E-03 |
| 63 | GO:0000049: tRNA binding | 9.00E-03 |
| 64 | GO:0031409: pigment binding | 1.25E-02 |
| 65 | GO:0008233: peptidase activity | 1.25E-02 |
| 66 | GO:0031625: ubiquitin protein ligase binding | 1.29E-02 |
| 67 | GO:0003954: NADH dehydrogenase activity | 1.35E-02 |
| 68 | GO:0003714: transcription corepressor activity | 1.35E-02 |
| 69 | GO:0043424: protein histidine kinase binding | 1.45E-02 |
| 70 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.45E-02 |
| 71 | GO:0004176: ATP-dependent peptidase activity | 1.55E-02 |
| 72 | GO:0016746: transferase activity, transferring acyl groups | 1.70E-02 |
| 73 | GO:0022891: substrate-specific transmembrane transporter activity | 1.76E-02 |
| 74 | GO:0003727: single-stranded RNA binding | 1.86E-02 |
| 75 | GO:0004812: aminoacyl-tRNA ligase activity | 1.97E-02 |
| 76 | GO:0004402: histone acetyltransferase activity | 2.09E-02 |
| 77 | GO:0008080: N-acetyltransferase activity | 2.20E-02 |
| 78 | GO:0016853: isomerase activity | 2.32E-02 |
| 79 | GO:0010181: FMN binding | 2.32E-02 |
| 80 | GO:0048038: quinone binding | 2.56E-02 |
| 81 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.67E-02 |
| 82 | GO:0015250: water channel activity | 3.32E-02 |
| 83 | GO:0003743: translation initiation factor activity | 3.34E-02 |
| 84 | GO:0042802: identical protein binding | 3.64E-02 |
| 85 | GO:0008236: serine-type peptidase activity | 3.87E-02 |
| 86 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.01E-02 |
| 87 | GO:0008168: methyltransferase activity | 4.26E-02 |
| 88 | GO:0050897: cobalt ion binding | 4.45E-02 |
| 89 | GO:0030145: manganese ion binding | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 7.42E-44 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.21E-15 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 3.40E-14 |
| 6 | GO:0009570: chloroplast stroma | 6.65E-10 |
| 7 | GO:0031977: thylakoid lumen | 1.44E-08 |
| 8 | GO:0009534: chloroplast thylakoid | 9.10E-06 |
| 9 | GO:0009941: chloroplast envelope | 6.05E-05 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 9.22E-05 |
| 11 | GO:0009782: photosystem I antenna complex | 2.57E-04 |
| 12 | GO:0019898: extrinsic component of membrane | 2.66E-04 |
| 13 | GO:0009579: thylakoid | 2.99E-04 |
| 14 | GO:0042644: chloroplast nucleoid | 3.60E-04 |
| 15 | GO:0031415: NatA complex | 5.68E-04 |
| 16 | GO:0008290: F-actin capping protein complex | 5.68E-04 |
| 17 | GO:0031304: intrinsic component of mitochondrial inner membrane | 5.68E-04 |
| 18 | GO:0010287: plastoglobule | 5.91E-04 |
| 19 | GO:0031969: chloroplast membrane | 5.95E-04 |
| 20 | GO:0030095: chloroplast photosystem II | 8.40E-04 |
| 21 | GO:0042646: plastid nucleoid | 1.32E-03 |
| 22 | GO:0009526: plastid envelope | 1.76E-03 |
| 23 | GO:0030286: dynein complex | 1.76E-03 |
| 24 | GO:0055035: plastid thylakoid membrane | 2.25E-03 |
| 25 | GO:0009523: photosystem II | 2.61E-03 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 3.93E-03 |
| 27 | GO:0009538: photosystem I reaction center | 4.56E-03 |
| 28 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.92E-03 |
| 29 | GO:0090404: pollen tube tip | 8.19E-03 |
| 30 | GO:0012511: monolayer-surrounded lipid storage body | 8.19E-03 |
| 31 | GO:0000311: plastid large ribosomal subunit | 9.00E-03 |
| 32 | GO:0009508: plastid chromosome | 9.85E-03 |
| 33 | GO:0030076: light-harvesting complex | 1.16E-02 |
| 34 | GO:0005875: microtubule associated complex | 1.25E-02 |
| 35 | GO:0042651: thylakoid membrane | 1.45E-02 |
| 36 | GO:0005778: peroxisomal membrane | 3.06E-02 |
| 37 | GO:0009295: nucleoid | 3.06E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 3.32E-02 |
| 39 | GO:0009707: chloroplast outer membrane | 4.01E-02 |
| 40 | GO:0015934: large ribosomal subunit | 4.45E-02 |