Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G14640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0046177: D-gluconate catabolic process0.00E+00
3GO:0009398: FMN biosynthetic process0.00E+00
4GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
5GO:0006593: ornithine catabolic process0.00E+00
6GO:0019458: methionine catabolic process via 2-oxobutanoate0.00E+00
7GO:0046680: response to DDT0.00E+00
8GO:1903647: negative regulation of chlorophyll catabolic process0.00E+00
9GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
10GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
11GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.65E-05
12GO:0010189: vitamin E biosynthetic process2.36E-05
13GO:0022904: respiratory electron transport chain3.21E-05
14GO:0055114: oxidation-reduction process4.12E-05
15GO:0009060: aerobic respiration6.66E-05
16GO:0019343: cysteine biosynthetic process via cystathionine8.25E-05
17GO:0019544: arginine catabolic process to glutamate8.25E-05
18GO:0010365: positive regulation of ethylene biosynthetic process8.25E-05
19GO:0071266: 'de novo' L-methionine biosynthetic process8.25E-05
20GO:0000032: cell wall mannoprotein biosynthetic process8.25E-05
21GO:0019346: transsulfuration8.25E-05
22GO:0042964: thioredoxin reduction8.25E-05
23GO:0006099: tricarboxylic acid cycle1.18E-04
24GO:0019483: beta-alanine biosynthetic process1.97E-04
25GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.97E-04
26GO:0046939: nucleotide phosphorylation1.97E-04
27GO:0009915: phloem sucrose loading1.97E-04
28GO:0006212: uracil catabolic process1.97E-04
29GO:0005975: carbohydrate metabolic process3.13E-04
30GO:0043617: cellular response to sucrose starvation3.29E-04
31GO:0044746: amino acid transmembrane export3.29E-04
32GO:0033591: response to L-ascorbic acid3.29E-04
33GO:0051646: mitochondrion localization3.29E-04
34GO:0042631: cellular response to water deprivation4.61E-04
35GO:0051289: protein homotetramerization4.75E-04
36GO:0006572: tyrosine catabolic process4.75E-04
37GO:0009413: response to flooding4.75E-04
38GO:0009298: GDP-mannose biosynthetic process4.75E-04
39GO:0009646: response to absence of light5.32E-04
40GO:1901657: glycosyl compound metabolic process6.90E-04
41GO:0006564: L-serine biosynthetic process8.00E-04
42GO:0097428: protein maturation by iron-sulfur cluster transfer8.00E-04
43GO:0009816: defense response to bacterium, incompatible interaction9.14E-04
44GO:0002238: response to molecule of fungal origin9.77E-04
45GO:0006561: proline biosynthetic process9.77E-04
46GO:0009554: megasporogenesis1.16E-03
47GO:0010019: chloroplast-nucleus signaling pathway1.16E-03
48GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.16E-03
49GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.36E-03
50GO:0010044: response to aluminum ion1.36E-03
51GO:0009651: response to salt stress1.53E-03
52GO:0009231: riboflavin biosynthetic process1.57E-03
53GO:0006102: isocitrate metabolic process1.57E-03
54GO:0009642: response to light intensity1.57E-03
55GO:0019430: removal of superoxide radicals1.79E-03
56GO:0043562: cellular response to nitrogen levels1.79E-03
57GO:0009744: response to sucrose1.79E-03
58GO:0015996: chlorophyll catabolic process1.79E-03
59GO:0009636: response to toxic substance2.01E-03
60GO:0031347: regulation of defense response2.16E-03
61GO:0048354: mucilage biosynthetic process involved in seed coat development2.26E-03
62GO:0009809: lignin biosynthetic process2.40E-03
63GO:0006032: chitin catabolic process2.51E-03
64GO:0043069: negative regulation of programmed cell death2.51E-03
65GO:0010192: mucilage biosynthetic process2.51E-03
66GO:0009970: cellular response to sulfate starvation2.51E-03
67GO:0072593: reactive oxygen species metabolic process2.77E-03
68GO:0000272: polysaccharide catabolic process2.77E-03
69GO:0048316: seed development2.92E-03
70GO:0006790: sulfur compound metabolic process3.03E-03
71GO:0012501: programmed cell death3.03E-03
72GO:0071555: cell wall organization3.15E-03
73GO:0009725: response to hormone3.31E-03
74GO:0006807: nitrogen compound metabolic process3.31E-03
75GO:0009624: response to nematode3.40E-03
76GO:0009266: response to temperature stimulus3.59E-03
77GO:0002237: response to molecule of bacterial origin3.59E-03
78GO:0019853: L-ascorbic acid biosynthetic process3.88E-03
79GO:0046854: phosphatidylinositol phosphorylation3.88E-03
80GO:0042343: indole glucosinolate metabolic process3.88E-03
81GO:0006636: unsaturated fatty acid biosynthetic process4.18E-03
82GO:0009833: plant-type primary cell wall biogenesis4.18E-03
83GO:0019762: glucosinolate catabolic process4.18E-03
84GO:0000162: tryptophan biosynthetic process4.18E-03
85GO:0042744: hydrogen peroxide catabolic process4.83E-03
86GO:0048511: rhythmic process5.12E-03
87GO:0098542: defense response to other organism5.12E-03
88GO:0016226: iron-sulfur cluster assembly5.45E-03
89GO:0030245: cellulose catabolic process5.45E-03
90GO:0009625: response to insect5.78E-03
91GO:0009611: response to wounding5.96E-03
92GO:0006817: phosphate ion transport6.13E-03
93GO:0046686: response to cadmium ion6.18E-03
94GO:0000271: polysaccharide biosynthetic process6.83E-03
95GO:0010118: stomatal movement6.83E-03
96GO:0006520: cellular amino acid metabolic process7.20E-03
97GO:0010154: fruit development7.20E-03
98GO:0030163: protein catabolic process9.12E-03
99GO:0044550: secondary metabolite biosynthetic process1.22E-02
100GO:0016311: dephosphorylation1.26E-02
101GO:0016049: cell growth1.26E-02
102GO:0030244: cellulose biosynthetic process1.30E-02
103GO:0008219: cell death1.30E-02
104GO:0009813: flavonoid biosynthetic process1.35E-02
105GO:0009407: toxin catabolic process1.39E-02
106GO:0006979: response to oxidative stress1.43E-02
107GO:0010043: response to zinc ion1.44E-02
108GO:0007568: aging1.44E-02
109GO:0006631: fatty acid metabolic process1.74E-02
110GO:0042542: response to hydrogen peroxide1.79E-02
111GO:0008283: cell proliferation1.84E-02
112GO:0006855: drug transmembrane transport2.05E-02
113GO:0009846: pollen germination2.16E-02
114GO:0042538: hyperosmotic salinity response2.16E-02
115GO:0006486: protein glycosylation2.28E-02
116GO:0009626: plant-type hypersensitive response2.68E-02
117GO:0007275: multicellular organism development3.32E-02
118GO:0009058: biosynthetic process3.56E-02
119GO:0055085: transmembrane transport3.74E-02
120GO:0009790: embryo development3.83E-02
121GO:0010150: leaf senescence4.32E-02
122GO:0009739: response to gibberellin4.67E-02
123GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.67E-02
RankGO TermAdjusted P value
1GO:0047782: coniferin beta-glucosidase activity0.00E+00
2GO:0032441: pheophorbide a oxygenase activity0.00E+00
3GO:0010176: homogentisate phytyltransferase activity0.00E+00
4GO:0003796: lysozyme activity0.00E+00
5GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity0.00E+00
6GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
7GO:0008531: riboflavin kinase activity0.00E+00
8GO:0018826: methionine gamma-lyase activity0.00E+00
9GO:0003837: beta-ureidopropionase activity0.00E+00
10GO:0046316: gluconokinase activity0.00E+00
11GO:0008422: beta-glucosidase activity5.10E-06
12GO:0008177: succinate dehydrogenase (ubiquinone) activity1.08E-05
13GO:0051538: 3 iron, 4 sulfur cluster binding1.08E-05
14GO:0000104: succinate dehydrogenase activity1.08E-05
15GO:0102483: scopolin beta-glucosidase activity6.65E-05
16GO:0004476: mannose-6-phosphate isomerase activity8.25E-05
17GO:0016682: oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor8.25E-05
18GO:0016229: steroid dehydrogenase activity8.25E-05
19GO:0004123: cystathionine gamma-lyase activity8.25E-05
20GO:0070401: NADP+ binding8.25E-05
21GO:0004048: anthranilate phosphoribosyltransferase activity8.25E-05
22GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity8.25E-05
23GO:0051537: 2 iron, 2 sulfur cluster binding1.78E-04
24GO:0047517: 1,4-beta-D-xylan synthase activity1.97E-04
25GO:0008517: folic acid transporter activity1.97E-04
26GO:0004566: beta-glucuronidase activity1.97E-04
27GO:0004617: phosphoglycerate dehydrogenase activity1.97E-04
28GO:0004047: aminomethyltransferase activity1.97E-04
29GO:0003919: FMN adenylyltransferase activity1.97E-04
30GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.13E-04
31GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity3.29E-04
32GO:0003962: cystathionine gamma-synthase activity3.29E-04
33GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity3.29E-04
34GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity3.29E-04
35GO:0010277: chlorophyllide a oxygenase [overall] activity3.29E-04
36GO:0015186: L-glutamine transmembrane transporter activity4.75E-04
37GO:0019201: nucleotide kinase activity4.75E-04
38GO:0004449: isocitrate dehydrogenase (NAD+) activity4.75E-04
39GO:0030170: pyridoxal phosphate binding5.83E-04
40GO:0004659: prenyltransferase activity6.32E-04
41GO:0004462: lactoylglutathione lyase activity9.77E-04
42GO:0004866: endopeptidase inhibitor activity9.77E-04
43GO:0004017: adenylate kinase activity1.16E-03
44GO:0004602: glutathione peroxidase activity1.16E-03
45GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.16E-03
46GO:0020037: heme binding1.50E-03
47GO:0004033: aldo-keto reductase (NADP) activity1.57E-03
48GO:0051539: 4 iron, 4 sulfur cluster binding1.59E-03
49GO:0008270: zinc ion binding1.89E-03
50GO:0051287: NAD binding2.16E-03
51GO:0004568: chitinase activity2.51E-03
52GO:0008559: xenobiotic-transporting ATPase activity2.77E-03
53GO:0009055: electron carrier activity3.06E-03
54GO:0004190: aspartic-type endopeptidase activity3.88E-03
55GO:0004725: protein tyrosine phosphatase activity4.18E-03
56GO:0008134: transcription factor binding4.48E-03
57GO:0051536: iron-sulfur cluster binding4.48E-03
58GO:0008810: cellulase activity5.78E-03
59GO:0016760: cellulose synthase (UDP-forming) activity5.78E-03
60GO:0005199: structural constituent of cell wall7.20E-03
61GO:0042626: ATPase activity, coupled to transmembrane movement of substances7.43E-03
62GO:0004791: thioredoxin-disulfide reductase activity7.57E-03
63GO:0000287: magnesium ion binding8.88E-03
64GO:0004601: peroxidase activity9.05E-03
65GO:0016759: cellulose synthase activity9.53E-03
66GO:0016791: phosphatase activity9.53E-03
67GO:0008483: transaminase activity9.94E-03
68GO:0016597: amino acid binding1.04E-02
69GO:0004721: phosphoprotein phosphatase activity1.21E-02
70GO:0016798: hydrolase activity, acting on glycosyl bonds1.21E-02
71GO:0030145: manganese ion binding1.44E-02
72GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.46E-02
73GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.54E-02
74GO:0004364: glutathione transferase activity1.79E-02
75GO:0005198: structural molecule activity2.00E-02
76GO:0045735: nutrient reservoir activity2.56E-02
77GO:0046872: metal ion binding2.93E-02
78GO:0016740: transferase activity3.60E-02
79GO:0019825: oxygen binding4.19E-02
RankGO TermAdjusted P value
1GO:0045281: succinate dehydrogenase complex3.72E-07
2GO:0045273: respiratory chain complex II4.22E-05
3GO:0005759: mitochondrial matrix6.64E-05
4GO:0000325: plant-type vacuole9.67E-05
5GO:0055035: plastid thylakoid membrane8.00E-04
6GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.57E-03
7GO:0005765: lysosomal membrane2.77E-03
8GO:0005576: extracellular region3.11E-03
9GO:0005758: mitochondrial intermembrane space4.48E-03
10GO:0070469: respiratory chain4.80E-03
11GO:0005777: peroxisome6.90E-03
12GO:0005739: mitochondrion1.54E-02
13GO:0005829: cytosol1.83E-02
14GO:0005774: vacuolar membrane2.06E-02
15GO:0000502: proteasome complex2.28E-02
16GO:0010008: endosome membrane2.62E-02
17GO:0009706: chloroplast inner membrane2.93E-02
18GO:0005615: extracellular space4.67E-02
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Gene type



Gene DE type