GO Enrichment Analysis of Co-expressed Genes with
AT5G13850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 2 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 3 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 4 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 5 | GO:0006412: translation | 1.74E-162 |
| 6 | GO:0042254: ribosome biogenesis | 7.12E-57 |
| 7 | GO:0000027: ribosomal large subunit assembly | 5.35E-13 |
| 8 | GO:0006626: protein targeting to mitochondrion | 6.62E-12 |
| 9 | GO:0000028: ribosomal small subunit assembly | 1.34E-09 |
| 10 | GO:0000387: spliceosomal snRNP assembly | 7.00E-07 |
| 11 | GO:0009955: adaxial/abaxial pattern specification | 5.58E-06 |
| 12 | GO:0006364: rRNA processing | 6.71E-06 |
| 13 | GO:1902626: assembly of large subunit precursor of preribosome | 2.16E-05 |
| 14 | GO:0002181: cytoplasmic translation | 2.16E-05 |
| 15 | GO:0000398: mRNA splicing, via spliceosome | 2.73E-05 |
| 16 | GO:0031167: rRNA methylation | 1.31E-04 |
| 17 | GO:0009735: response to cytokinin | 1.33E-04 |
| 18 | GO:0030150: protein import into mitochondrial matrix | 1.71E-04 |
| 19 | GO:0045040: protein import into mitochondrial outer membrane | 1.88E-04 |
| 20 | GO:0006407: rRNA export from nucleus | 3.70E-04 |
| 21 | GO:0031120: snRNA pseudouridine synthesis | 3.70E-04 |
| 22 | GO:0031118: rRNA pseudouridine synthesis | 3.70E-04 |
| 23 | GO:0015801: aromatic amino acid transport | 3.70E-04 |
| 24 | GO:0030490: maturation of SSU-rRNA | 3.70E-04 |
| 25 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.70E-04 |
| 26 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.70E-04 |
| 27 | GO:0008033: tRNA processing | 4.00E-04 |
| 28 | GO:0001510: RNA methylation | 5.06E-04 |
| 29 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 8.05E-04 |
| 30 | GO:0048569: post-embryonic animal organ development | 8.05E-04 |
| 31 | GO:0009967: positive regulation of signal transduction | 8.05E-04 |
| 32 | GO:0009150: purine ribonucleotide metabolic process | 1.30E-03 |
| 33 | GO:0042256: mature ribosome assembly | 1.30E-03 |
| 34 | GO:0090506: axillary shoot meristem initiation | 1.30E-03 |
| 35 | GO:0007004: telomere maintenance via telomerase | 1.88E-03 |
| 36 | GO:0070301: cellular response to hydrogen peroxide | 1.88E-03 |
| 37 | GO:0006241: CTP biosynthetic process | 1.88E-03 |
| 38 | GO:0006165: nucleoside diphosphate phosphorylation | 1.88E-03 |
| 39 | GO:0006228: UTP biosynthetic process | 1.88E-03 |
| 40 | GO:0006164: purine nucleotide biosynthetic process | 1.88E-03 |
| 41 | GO:0008283: cell proliferation | 2.40E-03 |
| 42 | GO:2000032: regulation of secondary shoot formation | 2.52E-03 |
| 43 | GO:0042274: ribosomal small subunit biogenesis | 2.52E-03 |
| 44 | GO:0006183: GTP biosynthetic process | 2.52E-03 |
| 45 | GO:0007005: mitochondrion organization | 2.57E-03 |
| 46 | GO:0010197: polar nucleus fusion | 3.84E-03 |
| 47 | GO:0016070: RNA metabolic process | 3.99E-03 |
| 48 | GO:0000470: maturation of LSU-rRNA | 3.99E-03 |
| 49 | GO:0000741: karyogamy | 3.99E-03 |
| 50 | GO:0006458: 'de novo' protein folding | 4.81E-03 |
| 51 | GO:0000245: spliceosomal complex assembly | 4.81E-03 |
| 52 | GO:0016444: somatic cell DNA recombination | 4.81E-03 |
| 53 | GO:0001522: pseudouridine synthesis | 6.61E-03 |
| 54 | GO:0035265: organ growth | 6.61E-03 |
| 55 | GO:0001558: regulation of cell growth | 7.58E-03 |
| 56 | GO:0006189: 'de novo' IMP biosynthetic process | 8.60E-03 |
| 57 | GO:0007338: single fertilization | 8.60E-03 |
| 58 | GO:0048507: meristem development | 8.60E-03 |
| 59 | GO:0010162: seed dormancy process | 1.08E-02 |
| 60 | GO:0010015: root morphogenesis | 1.19E-02 |
| 61 | GO:0006913: nucleocytoplasmic transport | 1.19E-02 |
| 62 | GO:0006790: sulfur compound metabolic process | 1.32E-02 |
| 63 | GO:0006820: anion transport | 1.32E-02 |
| 64 | GO:0010102: lateral root morphogenesis | 1.44E-02 |
| 65 | GO:0006446: regulation of translational initiation | 1.57E-02 |
| 66 | GO:0048467: gynoecium development | 1.57E-02 |
| 67 | GO:0009965: leaf morphogenesis | 1.66E-02 |
| 68 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.98E-02 |
| 69 | GO:0051302: regulation of cell division | 2.12E-02 |
| 70 | GO:0003333: amino acid transmembrane transport | 2.27E-02 |
| 71 | GO:0006334: nucleosome assembly | 2.27E-02 |
| 72 | GO:0061077: chaperone-mediated protein folding | 2.27E-02 |
| 73 | GO:0009294: DNA mediated transformation | 2.58E-02 |
| 74 | GO:0040007: growth | 2.58E-02 |
| 75 | GO:0071215: cellular response to abscisic acid stimulus | 2.58E-02 |
| 76 | GO:0042127: regulation of cell proliferation | 2.73E-02 |
| 77 | GO:0000413: protein peptidyl-prolyl isomerization | 3.06E-02 |
| 78 | GO:0006635: fatty acid beta-oxidation | 3.75E-02 |
| 79 | GO:0080156: mitochondrial mRNA modification | 3.75E-02 |
| 80 | GO:0015031: protein transport | 4.11E-02 |
| 81 | GO:0009567: double fertilization forming a zygote and endosperm | 4.30E-02 |
| 82 | GO:0010252: auxin homeostasis | 4.30E-02 |
| 83 | GO:0009409: response to cold | 4.55E-02 |
| 84 | GO:0006413: translational initiation | 4.55E-02 |
| 85 | GO:0009793: embryo development ending in seed dormancy | 4.65E-02 |
| 86 | GO:0006414: translational elongation | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 3 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 2.13E-195 |
| 5 | GO:0003729: mRNA binding | 2.99E-35 |
| 6 | GO:0019843: rRNA binding | 9.36E-16 |
| 7 | GO:0003723: RNA binding | 1.14E-11 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.93E-07 |
| 9 | GO:0030515: snoRNA binding | 8.89E-06 |
| 10 | GO:0008649: rRNA methyltransferase activity | 2.16E-05 |
| 11 | GO:0001055: RNA polymerase II activity | 3.50E-05 |
| 12 | GO:0008097: 5S rRNA binding | 4.74E-05 |
| 13 | GO:0001054: RNA polymerase I activity | 5.76E-05 |
| 14 | GO:0001056: RNA polymerase III activity | 7.16E-05 |
| 15 | GO:0005080: protein kinase C binding | 3.70E-04 |
| 16 | GO:0035614: snRNA stem-loop binding | 3.70E-04 |
| 17 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 8.05E-04 |
| 18 | GO:0030619: U1 snRNA binding | 8.05E-04 |
| 19 | GO:0015173: aromatic amino acid transmembrane transporter activity | 8.05E-04 |
| 20 | GO:0070034: telomerase RNA binding | 8.05E-04 |
| 21 | GO:0005078: MAP-kinase scaffold activity | 8.05E-04 |
| 22 | GO:0044183: protein binding involved in protein folding | 9.61E-04 |
| 23 | GO:0015266: protein channel activity | 1.24E-03 |
| 24 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.30E-03 |
| 25 | GO:0004550: nucleoside diphosphate kinase activity | 1.88E-03 |
| 26 | GO:0047627: adenylylsulfatase activity | 1.88E-03 |
| 27 | GO:0005275: amine transmembrane transporter activity | 3.23E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.51E-03 |
| 29 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 3.99E-03 |
| 30 | GO:0008235: metalloexopeptidase activity | 5.68E-03 |
| 31 | GO:0043022: ribosome binding | 6.61E-03 |
| 32 | GO:0015288: porin activity | 6.61E-03 |
| 33 | GO:0008308: voltage-gated anion channel activity | 7.58E-03 |
| 34 | GO:0003746: translation elongation factor activity | 1.14E-02 |
| 35 | GO:0004407: histone deacetylase activity | 1.98E-02 |
| 36 | GO:0051087: chaperone binding | 2.12E-02 |
| 37 | GO:0051082: unfolded protein binding | 2.84E-02 |
| 38 | GO:0008080: N-acetyltransferase activity | 3.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 3 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 4 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 5 | GO:0005840: ribosome | 1.51E-140 |
| 6 | GO:0022625: cytosolic large ribosomal subunit | 4.49E-116 |
| 7 | GO:0022626: cytosolic ribosome | 1.67E-106 |
| 8 | GO:0022627: cytosolic small ribosomal subunit | 1.86E-77 |
| 9 | GO:0005730: nucleolus | 9.78E-47 |
| 10 | GO:0005737: cytoplasm | 1.29E-36 |
| 11 | GO:0005829: cytosol | 5.30E-33 |
| 12 | GO:0009506: plasmodesma | 3.06E-23 |
| 13 | GO:0015934: large ribosomal subunit | 9.02E-20 |
| 14 | GO:0005774: vacuolar membrane | 7.47E-13 |
| 15 | GO:0015935: small ribosomal subunit | 1.38E-12 |
| 16 | GO:0016020: membrane | 7.78E-11 |
| 17 | GO:0005773: vacuole | 3.59E-10 |
| 18 | GO:0005618: cell wall | 1.07E-09 |
| 19 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.09E-07 |
| 20 | GO:0005742: mitochondrial outer membrane translocase complex | 2.88E-07 |
| 21 | GO:0015030: Cajal body | 7.00E-07 |
| 22 | GO:0005681: spliceosomal complex | 7.05E-07 |
| 23 | GO:0019013: viral nucleocapsid | 2.76E-06 |
| 24 | GO:0034719: SMN-Sm protein complex | 2.16E-05 |
| 25 | GO:0005736: DNA-directed RNA polymerase I complex | 2.63E-05 |
| 26 | GO:0005685: U1 snRNP | 2.63E-05 |
| 27 | GO:0005666: DNA-directed RNA polymerase III complex | 3.50E-05 |
| 28 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.55E-05 |
| 29 | GO:0009507: chloroplast | 6.68E-05 |
| 30 | GO:0005665: DNA-directed RNA polymerase II, core complex | 7.16E-05 |
| 31 | GO:0005682: U5 snRNP | 8.40E-05 |
| 32 | GO:0005687: U4 snRNP | 1.31E-04 |
| 33 | GO:0097526: spliceosomal tri-snRNP complex | 1.31E-04 |
| 34 | GO:0005758: mitochondrial intermembrane space | 1.71E-04 |
| 35 | GO:0031428: box C/D snoRNP complex | 1.88E-04 |
| 36 | GO:0005689: U12-type spliceosomal complex | 2.54E-04 |
| 37 | GO:0030686: 90S preribosome | 3.70E-04 |
| 38 | GO:0005743: mitochondrial inner membrane | 6.68E-04 |
| 39 | GO:0071011: precatalytic spliceosome | 7.16E-04 |
| 40 | GO:0071010: prespliceosome | 8.05E-04 |
| 41 | GO:0005686: U2 snRNP | 8.35E-04 |
| 42 | GO:0071013: catalytic step 2 spliceosome | 9.61E-04 |
| 43 | GO:0032040: small-subunit processome | 1.10E-03 |
| 44 | GO:0034715: pICln-Sm protein complex | 1.30E-03 |
| 45 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.30E-03 |
| 46 | GO:0005886: plasma membrane | 1.58E-03 |
| 47 | GO:0000419: DNA-directed RNA polymerase V complex | 1.74E-03 |
| 48 | GO:0031429: box H/ACA snoRNP complex | 1.88E-03 |
| 49 | GO:0005741: mitochondrial outer membrane | 2.35E-03 |
| 50 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.04E-03 |
| 51 | GO:0000243: commitment complex | 3.99E-03 |
| 52 | GO:0016272: prefoldin complex | 4.81E-03 |
| 53 | GO:0071004: U2-type prespliceosome | 6.61E-03 |
| 54 | GO:0005688: U6 snRNP | 6.61E-03 |
| 55 | GO:0030529: intracellular ribonucleoprotein complex | 6.87E-03 |
| 56 | GO:0046930: pore complex | 7.58E-03 |
| 57 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 7.58E-03 |
| 58 | GO:0016604: nuclear body | 9.67E-03 |
| 59 | GO:0048471: perinuclear region of cytoplasm | 1.19E-02 |
| 60 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.19E-02 |
| 61 | GO:0031307: integral component of mitochondrial outer membrane | 1.32E-02 |
| 62 | GO:0005747: mitochondrial respiratory chain complex I | 2.43E-02 |
| 63 | GO:0016592: mediator complex | 3.93E-02 |