co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G13770

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009583: detection of light stimulus	0.00E+00
2	GO:0033231: carbohydrate export	0.00E+00
3	GO:0090470: shoot organ boundary specification	0.00E+00
4	GO:0071000: response to magnetism	0.00E+00
5	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
6	GO:0080005: photosystem stoichiometry adjustment	5.31E-07
7	GO:0009658: chloroplast organization	1.50E-06
8	GO:0016120: carotene biosynthetic process	1.50E-05
9	GO:0010190: cytochrome b6f complex assembly	2.28E-05
10	GO:0016117: carotenoid biosynthetic process	2.42E-05
11	GO:0015995: chlorophyll biosynthetic process	9.88E-05
12	GO:1902334: fructose export from vacuole to cytoplasm	1.00E-04
13	GO:0010362: negative regulation of anion channel activity by blue light	1.00E-04
14	GO:0015755: fructose transport	1.00E-04
15	GO:0071806: protein transmembrane transport	1.00E-04
16	GO:0072387: flavin adenine dinucleotide metabolic process	1.00E-04
17	GO:0071454: cellular response to anoxia	1.00E-04
18	GO:0071461: cellular response to redox state	1.00E-04
19	GO:1900426: positive regulation of defense response to bacterium	1.09E-04
20	GO:0009638: phototropism	1.09E-04
21	GO:0018298: protein-chromophore linkage	1.15E-04
22	GO:0007623: circadian rhythm	1.27E-04
23	GO:0055114: oxidation-reduction process	1.45E-04
24	GO:0009750: response to fructose	1.52E-04
25	GO:0009767: photosynthetic electron transport chain	2.03E-04
26	GO:0080153: negative regulation of reductive pentose-phosphate cycle	2.36E-04
27	GO:0080185: effector dependent induction by symbiont of host immune response	2.36E-04
28	GO:0010343: singlet oxygen-mediated programmed cell death	2.36E-04
29	GO:1901529: positive regulation of anion channel activity	2.36E-04
30	GO:0010115: regulation of abscisic acid biosynthetic process	2.36E-04
31	GO:0048314: embryo sac morphogenesis	2.36E-04
32	GO:0010617: circadian regulation of calcium ion oscillation	2.36E-04
33	GO:0050688: regulation of defense response to virus	2.36E-04
34	GO:0099402: plant organ development	2.36E-04
35	GO:0009644: response to high light intensity	2.55E-04
36	GO:1902448: positive regulation of shade avoidance	3.92E-04
37	GO:0006013: mannose metabolic process	3.92E-04
38	GO:1901672: positive regulation of systemic acquired resistance	3.92E-04
39	GO:0006696: ergosterol biosynthetic process	3.92E-04
40	GO:0070417: cellular response to cold	5.51E-04
41	GO:0010371: regulation of gibberellin biosynthetic process	5.64E-04
42	GO:1901332: negative regulation of lateral root development	5.64E-04
43	GO:0050482: arachidonic acid secretion	5.64E-04
44	GO:2001141: regulation of RNA biosynthetic process	5.64E-04
45	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	5.64E-04
46	GO:0010118: stomatal movement	5.95E-04
47	GO:0009646: response to absence of light	6.86E-04
48	GO:0015743: malate transport	7.50E-04
49	GO:0009765: photosynthesis, light harvesting	7.50E-04
50	GO:0006552: leucine catabolic process	7.50E-04
51	GO:1902347: response to strigolactone	7.50E-04
52	GO:0009902: chloroplast relocation	7.50E-04
53	GO:0010021: amylopectin biosynthetic process	7.50E-04
54	GO:0016123: xanthophyll biosynthetic process	9.47E-04
55	GO:0009616: virus induced gene silencing	9.47E-04
56	GO:0010117: photoprotection	9.47E-04
57	GO:0046283: anthocyanin-containing compound metabolic process	9.47E-04
58	GO:0045038: protein import into chloroplast thylakoid membrane	9.47E-04
59	GO:1901371: regulation of leaf morphogenesis	1.16E-03
60	GO:0060918: auxin transport	1.16E-03
61	GO:0006561: proline biosynthetic process	1.16E-03
62	GO:0010310: regulation of hydrogen peroxide metabolic process	1.38E-03
63	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.38E-03
64	GO:0010019: chloroplast-nucleus signaling pathway	1.38E-03
65	GO:1900056: negative regulation of leaf senescence	1.62E-03
66	GO:0010050: vegetative phase change	1.62E-03
67	GO:0051510: regulation of unidimensional cell growth	1.62E-03
68	GO:0009637: response to blue light	1.81E-03
69	GO:0006644: phospholipid metabolic process	1.87E-03
70	GO:0048564: photosystem I assembly	1.87E-03
71	GO:0006605: protein targeting	1.87E-03
72	GO:0009704: de-etiolation	1.87E-03
73	GO:0071482: cellular response to light stimulus	2.14E-03
74	GO:0032544: plastid translation	2.14E-03
75	GO:0009640: photomorphogenesis	2.32E-03
76	GO:0009744: response to sucrose	2.32E-03
77	GO:0009821: alkaloid biosynthetic process	2.41E-03
78	GO:0046777: protein autophosphorylation	2.61E-03
79	GO:0010380: regulation of chlorophyll biosynthetic process	2.70E-03
80	GO:0010267: production of ta-siRNAs involved in RNA interference	2.70E-03
81	GO:0006259: DNA metabolic process	3.00E-03
82	GO:0006995: cellular response to nitrogen starvation	3.00E-03
83	GO:0009688: abscisic acid biosynthetic process	3.00E-03
84	GO:0045036: protein targeting to chloroplast	3.00E-03
85	GO:0008285: negative regulation of cell proliferation	3.31E-03
86	GO:0006265: DNA topological change	3.31E-03
87	GO:0043085: positive regulation of catalytic activity	3.31E-03
88	GO:0006352: DNA-templated transcription, initiation	3.31E-03
89	GO:0016485: protein processing	3.31E-03
90	GO:0009725: response to hormone	3.95E-03
91	GO:0009785: blue light signaling pathway	3.95E-03
92	GO:0010075: regulation of meristem growth	3.95E-03
93	GO:0034605: cellular response to heat	4.30E-03
94	GO:0019253: reductive pentose-phosphate cycle	4.30E-03
95	GO:0010207: photosystem II assembly	4.30E-03
96	GO:0090351: seedling development	4.64E-03
97	GO:0010025: wax biosynthetic process	5.00E-03
98	GO:2000377: regulation of reactive oxygen species metabolic process	5.37E-03
99	GO:0007017: microtubule-based process	5.75E-03
100	GO:0010073: meristem maintenance	5.75E-03
101	GO:0051321: meiotic cell cycle	6.14E-03
102	GO:0051260: protein homooligomerization	6.14E-03
103	GO:0016226: iron-sulfur cluster assembly	6.54E-03
104	GO:0010227: floral organ abscission	6.94E-03
105	GO:0006817: phosphate ion transport	7.35E-03
106	GO:0010228: vegetative to reproductive phase transition of meristem	7.97E-03
107	GO:0009416: response to light stimulus	8.12E-03
108	GO:0006662: glycerol ether metabolic process	8.65E-03
109	GO:0010182: sugar mediated signaling pathway	8.65E-03
110	GO:0007059: chromosome segregation	9.10E-03
111	GO:0006814: sodium ion transport	9.10E-03
112	GO:0042752: regulation of circadian rhythm	9.10E-03
113	GO:0009791: post-embryonic development	9.56E-03
114	GO:0019252: starch biosynthetic process	9.56E-03
115	GO:0051607: defense response to virus	1.25E-02
116	GO:0009816: defense response to bacterium, incompatible interaction	1.35E-02
117	GO:0006950: response to stress	1.46E-02
118	GO:0000160: phosphorelay signal transduction system	1.62E-02
119	GO:0015979: photosynthesis	1.67E-02
120	GO:0006811: ion transport	1.68E-02
121	GO:0010218: response to far red light	1.68E-02
122	GO:0007568: aging	1.74E-02
123	GO:0009910: negative regulation of flower development	1.74E-02
124	GO:0045454: cell redox homeostasis	1.76E-02
125	GO:0000724: double-strand break repair via homologous recombination	1.80E-02
126	GO:0009853: photorespiration	1.86E-02
127	GO:0034599: cellular response to oxidative stress	1.91E-02
128	GO:0009408: response to heat	2.17E-02
129	GO:0010114: response to red light	2.22E-02
130	GO:0031347: regulation of defense response	2.55E-02
131	GO:0006364: rRNA processing	2.75E-02
132	GO:0006417: regulation of translation	2.95E-02
133	GO:0006810: transport	3.21E-02
134	GO:0009553: embryo sac development	3.46E-02
135	GO:0009735: response to cytokinin	3.51E-02
136	GO:0009058: biosynthetic process	4.30E-02
137	GO:0055085: transmembrane transport	4.85E-02
138	GO:0006457: protein folding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0015284: fructose uniporter activity	0.00E+00
2	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
3	GO:0045436: lycopene beta cyclase activity	0.00E+00
4	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
5	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
6	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
7	GO:0046905: phytoene synthase activity	0.00E+00
8	GO:0016851: magnesium chelatase activity	4.78E-06
9	GO:0009882: blue light photoreceptor activity	4.78E-06
10	GO:0048038: quinone binding	4.35E-05
11	GO:0071949: FAD binding	8.98E-05
12	GO:0004485: methylcrotonoyl-CoA carboxylase activity	1.00E-04
13	GO:0046906: tetrapyrrole binding	1.00E-04
14	GO:0051996: squalene synthase activity	1.00E-04
15	GO:0030941: chloroplast targeting sequence binding	1.00E-04
16	GO:0033201: alpha-1,4-glucan synthase activity	2.36E-04
17	GO:0015367: oxoglutarate:malate antiporter activity	2.36E-04
18	GO:0005353: fructose transmembrane transporter activity	2.36E-04
19	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	2.36E-04
20	GO:0004180: carboxypeptidase activity	3.92E-04
21	GO:0010277: chlorophyllide a oxygenase [overall] activity	3.92E-04
22	GO:0004373: glycogen (starch) synthase activity	3.92E-04
23	GO:0032947: protein complex scaffold	3.92E-04
24	GO:0004848: ureidoglycolate hydrolase activity	3.92E-04
25	GO:0004148: dihydrolipoyl dehydrogenase activity	3.92E-04
26	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.92E-04
27	GO:0004075: biotin carboxylase activity	3.92E-04
28	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	7.36E-04
29	GO:0001053: plastid sigma factor activity	7.50E-04
30	GO:0051861: glycolipid binding	7.50E-04
31	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.50E-04
32	GO:0016987: sigma factor activity	7.50E-04
33	GO:0009011: starch synthase activity	7.50E-04
34	GO:0004623: phospholipase A2 activity	9.47E-04
35	GO:0000293: ferric-chelate reductase activity	1.16E-03
36	GO:0004559: alpha-mannosidase activity	1.38E-03
37	GO:0042802: identical protein binding	1.43E-03
38	GO:0019899: enzyme binding	1.62E-03
39	GO:0050897: cobalt ion binding	1.65E-03
40	GO:0016491: oxidoreductase activity	1.74E-03
41	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	2.14E-03
42	GO:0016844: strictosidine synthase activity	2.70E-03
43	GO:0004022: alcohol dehydrogenase (NAD) activity	3.95E-03
44	GO:0005315: inorganic phosphate transmembrane transporter activity	3.95E-03
45	GO:0031072: heat shock protein binding	3.95E-03
46	GO:0000155: phosphorelay sensor kinase activity	3.95E-03
47	GO:0005506: iron ion binding	4.61E-03
48	GO:0051119: sugar transmembrane transporter activity	4.64E-03
49	GO:0051536: iron-sulfur cluster binding	5.37E-03
50	GO:0004176: ATP-dependent peptidase activity	6.14E-03
51	GO:0016887: ATPase activity	6.83E-03
52	GO:0022891: substrate-specific transmembrane transporter activity	6.94E-03
53	GO:0047134: protein-disulfide reductase activity	7.78E-03
54	GO:0008080: N-acetyltransferase activity	8.65E-03
55	GO:0004791: thioredoxin-disulfide reductase activity	9.10E-03
56	GO:0010181: FMN binding	9.10E-03
57	GO:0004872: receptor activity	9.56E-03
58	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.10E-02
59	GO:0008483: transaminase activity	1.20E-02
60	GO:0008237: metallopeptidase activity	1.20E-02
61	GO:0016788: hydrolase activity, acting on ester bonds	1.20E-02
62	GO:0016168: chlorophyll binding	1.35E-02
63	GO:0008236: serine-type peptidase activity	1.51E-02
64	GO:0004222: metalloendopeptidase activity	1.68E-02
65	GO:0051537: 2 iron, 2 sulfur cluster binding	2.35E-02
66	GO:0005198: structural molecule activity	2.41E-02
67	GO:0015293: symporter activity	2.41E-02
68	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.75E-02
69	GO:0003777: microtubule motor activity	2.95E-02
70	GO:0031625: ubiquitin protein ligase binding	2.95E-02
71	GO:0051082: unfolded protein binding	3.53E-02
72	GO:0015035: protein disulfide oxidoreductase activity	3.61E-02
73	GO:0016746: transferase activity, transferring acyl groups	3.61E-02
74	GO:0019843: rRNA binding	4.14E-02
75	GO:0005515: protein binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.14E-21
2	GO:0009535: chloroplast thylakoid membrane	9.12E-08
3	GO:0031969: chloroplast membrane	4.18E-05
4	GO:0009706: chloroplast inner membrane	4.66E-05
5	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.98E-05
6	GO:0080085: signal recognition particle, chloroplast targeting	2.36E-04
7	GO:0009528: plastid inner membrane	3.92E-04
8	GO:0010007: magnesium chelatase complex	3.92E-04
9	GO:0016605: PML body	3.92E-04
10	GO:0030286: dynein complex	7.50E-04
11	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	7.50E-04
12	GO:0009295: nucleoid	9.96E-04
13	GO:0005655: nucleolar ribonuclease P complex	1.38E-03
14	GO:0031359: integral component of chloroplast outer membrane	1.62E-03
15	GO:0009501: amyloplast	1.87E-03
16	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.14E-03
17	GO:0016604: nuclear body	2.70E-03
18	GO:0031966: mitochondrial membrane	2.90E-03
19	GO:0009570: chloroplast stroma	3.19E-03
20	GO:0048471: perinuclear region of cytoplasm	3.31E-03
21	GO:0005747: mitochondrial respiratory chain complex I	3.79E-03
22	GO:0009508: plastid chromosome	3.95E-03
23	GO:0043234: protein complex	5.00E-03
24	GO:0005875: microtubule associated complex	5.00E-03
25	GO:0005623: cell	5.67E-03
26	GO:0042651: thylakoid membrane	5.75E-03
27	GO:0045271: respiratory chain complex I	5.75E-03
28	GO:0009532: plastid stroma	6.14E-03
29	GO:0009536: plastid	6.44E-03
30	GO:0005759: mitochondrial matrix	6.93E-03
31	GO:0009523: photosystem II	9.56E-03
32	GO:0009534: chloroplast thylakoid	1.03E-02
33	GO:0009707: chloroplast outer membrane	1.57E-02
34	GO:0009941: chloroplast envelope	1.60E-02
35	GO:0031977: thylakoid lumen	2.10E-02
36	GO:0010287: plastoglobule	3.99E-02